RNA–Protein interactions for RNA: ENST00000455904.5

HDAC11-215, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-215ENST00000455904 DGKZQ13574 1117 aa23.22■■□□□ 1.31
HDAC11-215ENST00000455904 EYA3Q99504 573 aa23.22■■□□□ 1.31
HDAC11-215ENST00000455904 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
HDAC11-215ENST00000455904 RGMBQ6NW40 437 aa23.21■■□□□ 1.31
HDAC11-215ENST00000455904 TBC1D16Q8TBP0 767 aa23.21■■□□□ 1.31
HDAC11-215ENST00000455904 KCNQ5Q9NR82 932 aa23.21■■□□□ 1.31
HDAC11-215ENST00000455904 ZNF609O15014 1411 aa23.21■■□□□ 1.31
HDAC11-215ENST00000455904 TRIM28Q13263 835 aaKnown RBP23.2■■□□□ 1.3
HDAC11-215ENST00000455904 DOK7Q18PE1 504 aa23.2■■□□□ 1.3
HDAC11-215ENST00000455904 KIF4BQ2VIQ3 1234 aa23.2■■□□□ 1.3
HDAC11-215ENST00000455904 RTL5Q5HYW3 569 aaPredicted RBP23.2■■□□□ 1.3
HDAC11-215ENST00000455904 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
HDAC11-215ENST00000455904 HYPKQ9NX55 129 aa23.2■■□□□ 1.3
HDAC11-215ENST00000455904 PAPPA2Q9BXP8 1791 aa23.19■■□□□ 1.3
HDAC11-215ENST00000455904 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
HDAC11-215ENST00000455904 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
HDAC11-215ENST00000455904 C2orf69Q8N8R5 385 aa23.19■■□□□ 1.3
HDAC11-215ENST00000455904 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
HDAC11-215ENST00000455904 CFAP44Q96MT7 982 aa23.19■■□□□ 1.3
HDAC11-215ENST00000455904 SAGE1Q9NXZ1 904 aa23.19■■□□□ 1.3
HDAC11-215ENST00000455904 RPS8P62241 208 aaKnown RBP23.18■■□□□ 1.3
HDAC11-215ENST00000455904 RBM26Q5T8P6 1007 aaKnown RBP23.18■■□□□ 1.3
HDAC11-215ENST00000455904 CCDC102AQ96A19 550 aa23.18■■□□□ 1.3
HDAC11-215ENST00000455904 GGA3Q9NZ52 723 aa23.18■■□□□ 1.3
HDAC11-215ENST00000455904 PODXL2Q9NZ53 605 aa23.17■■□□□ 1.3
HDAC11-215ENST00000455904 VIL1P09327 827 aaKnown RBP23.16■■□□□ 1.3
HDAC11-215ENST00000455904 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
HDAC11-215ENST00000455904 UFL1O94874 794 aa23.15■■□□□ 1.3
HDAC11-215ENST00000455904 ZNF157P51786 506 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-215ENST00000455904 KIF23Q02241 960 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-215ENST00000455904 SULF1Q8IWU6 871 aa23.15■■□□□ 1.3
HDAC11-215ENST00000455904 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-215ENST00000455904 ZC3H12CQ9C0D7 883 aaKnown RBP23.15■■□□□ 1.3
HDAC11-215ENST00000455904 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
HDAC11-215ENST00000455904 SLC10A3P09131 477 aa23.14■■□□□ 1.29
HDAC11-215ENST00000455904 WDR43Q15061 677 aaKnown RBP eCLIP23.14■■□□□ 1.29
HDAC11-215ENST00000455904 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.29
HDAC11-215ENST00000455904 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
HDAC11-215ENST00000455904 CDCA5Q96FF9 252 aa23.13■■□□□ 1.29
HDAC11-215ENST00000455904 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
HDAC11-215ENST00000455904 ANKIB1Q9P2G1 1089 aa23.13■■□□□ 1.29
HDAC11-215ENST00000455904 GGA1Q9UJY5 639 aa23.13■■□□□ 1.29
HDAC11-215ENST00000455904 HSP90B1P14625 803 aaKnown RBP23.12■■□□□ 1.29
HDAC11-215ENST00000455904 ZNF280AP59817 542 aaPredicted RBP23.12■■□□□ 1.29
HDAC11-215ENST00000455904 RIC3Q7Z5B4 369 aa23.12■■□□□ 1.29
HDAC11-215ENST00000455904 RNF186Q9NXI6 227 aa23.12■■□□□ 1.29
HDAC11-215ENST00000455904 G3V3G9 751 aa23.1■■□□□ 1.29
HDAC11-215ENST00000455904 TRPA1O75762 1119 aa23.1■■□□□ 1.29
HDAC11-215ENST00000455904 CCDC152Q4G0S7 254 aa23.1■■□□□ 1.29
HDAC11-215ENST00000455904 DCAF8Q5TAQ9 597 aa23.1■■□□□ 1.29
HDAC11-215ENST00000455904 RSBN1LQ6PCB5 846 aaPredicted RBP23.1■■□□□ 1.29
HDAC11-215ENST00000455904 AGBL3Q8NEM8 1001 aa23.1■■□□□ 1.29
HDAC11-215ENST00000455904 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
HDAC11-215ENST00000455904 ANGEL2Q5VTE6 544 aaKnown RBP23.09■■□□□ 1.29
HDAC11-215ENST00000455904 MYD88Q99836 296 aa23.09■■□□□ 1.29
HDAC11-215ENST00000455904 PHAXQ9H814 394 aaKnown RBP23.09■■□□□ 1.29
HDAC11-215ENST00000455904 ADAMTS8Q9UP79 889 aa23.09■■□□□ 1.29
HDAC11-215ENST00000455904 ZNF853P0CG23 659 aa23.08■■□□□ 1.29
HDAC11-215ENST00000455904 RASAL3Q86YV0 1011 aa23.08■■□□□ 1.29
HDAC11-215ENST00000455904 CCDC191Q8NCU4 936 aa23.08■■□□□ 1.29
HDAC11-215ENST00000455904 CSRNP1Q96S65 589 aa23.08■■□□□ 1.29
HDAC11-215ENST00000455904 XDHP47989 1333 aa23.08■■□□□ 1.28
HDAC11-215ENST00000455904 PDE8AO60658 829 aa23.07■■□□□ 1.28
HDAC11-215ENST00000455904 SCARF1Q14162 830 aa23.07■■□□□ 1.28
HDAC11-215ENST00000455904 GMLQ99445 158 aa23.07■■□□□ 1.28
HDAC11-215ENST00000455904 PITPNM2Q9BZ72 1349 aa23.07■■□□□ 1.28
HDAC11-215ENST00000455904 FKBP1BP68106 108 aa23.06■■□□□ 1.28
HDAC11-215ENST00000455904 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
HDAC11-215ENST00000455904 IFT57Q9NWB7 429 aa23.06■■□□□ 1.28
HDAC11-215ENST00000455904 CWC25Q9NXE8 425 aaPredicted RBP23.06■■□□□ 1.28
HDAC11-215ENST00000455904 USP17L8P0C7I0 530 aa23.05■■□□□ 1.28
HDAC11-215ENST00000455904 ANKRD18AQ8IVF6 992 aa23.05■■□□□ 1.28
HDAC11-215ENST00000455904 REM2Q8IYK8 340 aaPredicted RBP23.05■■□□□ 1.28
HDAC11-215ENST00000455904 MYOZ2Q9NPC6 264 aa23.05■■□□□ 1.28
HDAC11-215ENST00000455904 ECM29Q5VYK3 1845 aa23.04■■□□□ 1.28
HDAC11-215ENST00000455904 SOX10P56693 466 aa23.04■■□□□ 1.28
HDAC11-215ENST00000455904 DDX10Q13206 875 aaKnown RBP23.04■■□□□ 1.28
HDAC11-215ENST00000455904 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
HDAC11-215ENST00000455904 MED23Q9ULK4 1368 aa23.03■■□□□ 1.28
HDAC11-215ENST00000455904 USP17L3A6NCW0 530 aa23.03■■□□□ 1.28
HDAC11-215ENST00000455904 USP17L4A6NCW7 530 aa23.03■■□□□ 1.28
HDAC11-215ENST00000455904 ATP2B4P23634 1241 aa23.03■■□□□ 1.28
HDAC11-215ENST00000455904 USP17L1Q7RTZ2 530 aa23.03■■□□□ 1.28
HDAC11-215ENST00000455904 CTU1Q7Z7A3 348 aaKnown RBP23.03■■□□□ 1.28
HDAC11-215ENST00000455904 METTL22Q9BUU2 404 aaPredicted RBP23.03■■□□□ 1.28
HDAC11-215ENST00000455904 A0A1B0GUL6 1792 aa23.03■■□□□ 1.28
HDAC11-215ENST00000455904 LAMB1P07942 1786 aa23.03■■□□□ 1.28
HDAC11-215ENST00000455904 CACNA1FO60840 1977 aa23.02■■□□□ 1.28
HDAC11-215ENST00000455904 ELL2O00472 640 aaPredicted RBP23.02■■□□□ 1.28
HDAC11-215ENST00000455904 GNAI1P63096 354 aa23.02■■□□□ 1.28
HDAC11-215ENST00000455904 PODNQ7Z5L7 613 aa23.02■■□□□ 1.28
HDAC11-215ENST00000455904 CTSWP56202 376 aa23.01■■□□□ 1.27
HDAC11-215ENST00000455904 CALD1Q05682 793 aaKnown RBP23.01■■□□□ 1.27
HDAC11-215ENST00000455904 DDX58O95786 925 aaKnown RBP23■■□□□ 1.27
HDAC11-215ENST00000455904 CDC5LQ99459 802 aaKnown RBP23■■□□□ 1.27
HDAC11-215ENST00000455904 MOB2Q70IA6 237 aa22.99■■□□□ 1.27
HDAC11-215ENST00000455904 C8orf58Q8NAV2 365 aa22.99■■□□□ 1.27
HDAC11-215ENST00000455904 SCAF8Q9UPN6 1271 aaKnown RBP22.99■■□□□ 1.27
HDAC11-215ENST00000455904 WTIPA6NIX2 430 aaPredicted RBP22.98■■□□□ 1.27
HDAC11-215ENST00000455904 APAF1O14727 1248 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms