RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 CALD1Q05682 793 aaKnown RBP17.24■□□□□ 0.35
PSMC4-202ENST00000455878 NOGQ13253 232 aa17.24■□□□□ 0.35
PSMC4-202ENST00000455878 TBC1D10BQ4KMP7 808 aaPredicted RBP17.24■□□□□ 0.35
PSMC4-202ENST00000455878 KRT26Q7Z3Y9 468 aa17.24■□□□□ 0.35
PSMC4-202ENST00000455878 C2orf69Q8N8R5 385 aa17.24■□□□□ 0.35
PSMC4-202ENST00000455878 ANKIB1Q9P2G1 1089 aa17.24■□□□□ 0.35
PSMC4-202ENST00000455878 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
PSMC4-202ENST00000455878 APAF1O14727 1248 aa17.23■□□□□ 0.35
PSMC4-202ENST00000455878 ECE2O60344 883 aa17.23■□□□□ 0.35
PSMC4-202ENST00000455878 ZBTB38Q8NAP3 1195 aaPredicted RBP17.23■□□□□ 0.35
PSMC4-202ENST00000455878 TBC1D16Q8TBP0 767 aa17.23■□□□□ 0.35
PSMC4-202ENST00000455878 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
PSMC4-202ENST00000455878 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
PSMC4-202ENST00000455878 GNAI1P63096 354 aa17.21■□□□□ 0.35
PSMC4-202ENST00000455878 CCDC152Q4G0S7 254 aa17.21■□□□□ 0.35
PSMC4-202ENST00000455878 CCDC102AQ96A19 550 aa17.21■□□□□ 0.35
PSMC4-202ENST00000455878 KCNQ5Q9NR82 932 aa17.21■□□□□ 0.35
PSMC4-202ENST00000455878 DDX58O95786 925 aaKnown RBP17.21■□□□□ 0.34
PSMC4-202ENST00000455878 SULF1Q8IWU6 871 aa17.21■□□□□ 0.34
PSMC4-202ENST00000455878 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.34
PSMC4-202ENST00000455878 MYD88Q99836 296 aa17.21■□□□□ 0.34
PSMC4-202ENST00000455878 GBA2Q9HCG7 927 aaPredicted RBP17.21■□□□□ 0.34
PSMC4-202ENST00000455878 GGA1Q9UJY5 639 aa17.21■□□□□ 0.34
PSMC4-202ENST00000455878 TAF1P21675 1872 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 LAMB2P55268 1798 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 UFL1O94874 794 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 DLK2Q6UY11 383 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
PSMC4-202ENST00000455878 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
PSMC4-202ENST00000455878 PDE8AO60658 829 aa17.19■□□□□ 0.34
PSMC4-202ENST00000455878 VIL1P09327 827 aaKnown RBP17.19■□□□□ 0.34
PSMC4-202ENST00000455878 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
PSMC4-202ENST00000455878 MLLT1Q03111 559 aaPredicted RBP17.19■□□□□ 0.34
PSMC4-202ENST00000455878 KIF4BQ2VIQ3 1234 aa17.19■□□□□ 0.34
PSMC4-202ENST00000455878 CWC25Q9NXE8 425 aaPredicted RBP17.19■□□□□ 0.34
PSMC4-202ENST00000455878 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
PSMC4-202ENST00000455878 PCCAP05165 728 aaPredicted RBP17.18■□□□□ 0.34
PSMC4-202ENST00000455878 ZNF853P0CG23 659 aa17.18■□□□□ 0.34
PSMC4-202ENST00000455878 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
PSMC4-202ENST00000455878 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
PSMC4-202ENST00000455878 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
PSMC4-202ENST00000455878 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
PSMC4-202ENST00000455878 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
PSMC4-202ENST00000455878 ADM5C9JUS6 153 aa17.17■□□□□ 0.34
PSMC4-202ENST00000455878 EGFRP00533 1210 aa17.17■□□□□ 0.34
PSMC4-202ENST00000455878 DGKZQ13574 1117 aa17.17■□□□□ 0.34
PSMC4-202ENST00000455878 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
PSMC4-202ENST00000455878 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
PSMC4-202ENST00000455878 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
PSMC4-202ENST00000455878 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-202ENST00000455878 AGBL3Q8NEM8 1001 aa17.16■□□□□ 0.34
PSMC4-202ENST00000455878 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-202ENST00000455878 ZIC5Q96T25 663 aa17.16■□□□□ 0.34
PSMC4-202ENST00000455878 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-202ENST00000455878 ATP2B4P23634 1241 aa17.15■□□□□ 0.34
PSMC4-202ENST00000455878 SCARF1Q14162 830 aa17.15■□□□□ 0.34
PSMC4-202ENST00000455878 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
PSMC4-202ENST00000455878 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
PSMC4-202ENST00000455878 C8orf58Q8NAV2 365 aa17.15■□□□□ 0.34
PSMC4-202ENST00000455878 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
PSMC4-202ENST00000455878 XDHP47989 1333 aa17.14■□□□□ 0.33
PSMC4-202ENST00000455878 THSD7BQ9C0I4 1608 aa17.14■□□□□ 0.33
PSMC4-202ENST00000455878 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
PSMC4-202ENST00000455878 RGS19P49795 217 aa17.14■□□□□ 0.33
PSMC4-202ENST00000455878 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
PSMC4-202ENST00000455878 CDC5LQ99459 802 aaKnown RBP17.14■□□□□ 0.33
PSMC4-202ENST00000455878 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.33
PSMC4-202ENST00000455878 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.33
PSMC4-202ENST00000455878 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
PSMC4-202ENST00000455878 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
PSMC4-202ENST00000455878 CASP8AP2Q9UKL3 1982 aa17.13■□□□□ 0.33
PSMC4-202ENST00000455878 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
PSMC4-202ENST00000455878 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
PSMC4-202ENST00000455878 FAM155AB1AL88 458 aaPredicted RBP17.13■□□□□ 0.33
PSMC4-202ENST00000455878 ZNF280AP59817 542 aaPredicted RBP17.13■□□□□ 0.33
PSMC4-202ENST00000455878 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
PSMC4-202ENST00000455878 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
PSMC4-202ENST00000455878 REM2Q8IYK8 340 aaPredicted RBP17.13■□□□□ 0.33
PSMC4-202ENST00000455878 SAGE1Q9NXZ1 904 aa17.13■□□□□ 0.33
PSMC4-202ENST00000455878 LRRC37AA6NMS7 1700 aa17.12■□□□□ 0.33
PSMC4-202ENST00000455878 TRPA1O75762 1119 aa17.12■□□□□ 0.33
PSMC4-202ENST00000455878 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
PSMC4-202ENST00000455878 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
PSMC4-202ENST00000455878 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
PSMC4-202ENST00000455878 MYOZ2Q9NPC6 264 aa17.12■□□□□ 0.33
PSMC4-202ENST00000455878 OGFOD1Q8N543 542 aa17.11■□□□□ 0.33
PSMC4-202ENST00000455878 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
PSMC4-202ENST00000455878 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
PSMC4-202ENST00000455878 FKBP1BP68106 108 aa17.1■□□□□ 0.33
PSMC4-202ENST00000455878 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
PSMC4-202ENST00000455878 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
PSMC4-202ENST00000455878 CSRNP1Q96S65 589 aa17.1■□□□□ 0.33
PSMC4-202ENST00000455878 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
PSMC4-202ENST00000455878 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
PSMC4-202ENST00000455878 ZNF521Q96K83 1311 aa17.09■□□□□ 0.33
PSMC4-202ENST00000455878 CTSWP56202 376 aa17.09■□□□□ 0.33
PSMC4-202ENST00000455878 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms