RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 WDR43Q15061 677 aaKnown RBP eCLIP24.28■■□□□ 1.48
MSH6-206ENST00000455383 DOK7Q18PE1 504 aa24.28■■□□□ 1.48
MSH6-206ENST00000455383 RTL5Q5HYW3 569 aaPredicted RBP24.28■■□□□ 1.48
MSH6-206ENST00000455383 ZBTB38Q8NAP3 1195 aaPredicted RBP24.28■■□□□ 1.48
MSH6-206ENST00000455383 MCOLN1Q9GZU1 580 aa24.28■■□□□ 1.48
MSH6-206ENST00000455383 MBIPQ9NS73 344 aa24.28■■□□□ 1.48
MSH6-206ENST00000455383 VIL1P09327 827 aaKnown RBP24.27■■□□□ 1.48
MSH6-206ENST00000455383 GBA2Q9HCG7 927 aaPredicted RBP24.27■■□□□ 1.48
MSH6-206ENST00000455383 ZNF609O15014 1411 aa24.27■■□□□ 1.48
MSH6-206ENST00000455383 SCN9AQ15858 1988 aa24.26■■□□□ 1.47
MSH6-206ENST00000455383 CASP8AP2Q9UKL3 1982 aa24.26■■□□□ 1.47
MSH6-206ENST00000455383 RGMBQ6NW40 437 aa24.26■■□□□ 1.47
MSH6-206ENST00000455383 POLR2AP24928 1970 aaKnown RBP24.25■■□□□ 1.47
MSH6-206ENST00000455383 ADM5C9JUS6 153 aa24.25■■□□□ 1.47
MSH6-206ENST00000455383 DDX10Q13206 875 aaKnown RBP24.25■■□□□ 1.47
MSH6-206ENST00000455383 DCPSQ96C86 337 aaKnown RBP24.25■■□□□ 1.47
MSH6-206ENST00000455383 ZC3H12CQ9C0D7 883 aaKnown RBP24.25■■□□□ 1.47
MSH6-206ENST00000455383 SEC31BQ9NQW1 1179 aa24.25■■□□□ 1.47
MSH6-206ENST00000455383 MLLT1Q03111 559 aaPredicted RBP24.24■■□□□ 1.47
MSH6-206ENST00000455383 KIF4BQ2VIQ3 1234 aa24.24■■□□□ 1.47
MSH6-206ENST00000455383 RBM26Q5T8P6 1007 aaKnown RBP24.24■■□□□ 1.47
MSH6-206ENST00000455383 RIC3Q7Z5B4 369 aa24.24■■□□□ 1.47
MSH6-206ENST00000455383 C2orf69Q8N8R5 385 aa24.24■■□□□ 1.47
MSH6-206ENST00000455383 PHAXQ9H814 394 aaKnown RBP24.24■■□□□ 1.47
MSH6-206ENST00000455383 HSP90B1P14625 803 aaKnown RBP24.23■■□□□ 1.47
MSH6-206ENST00000455383 GOLGA2Q08379 1002 aa24.23■■□□□ 1.47
MSH6-206ENST00000455383 CCDC102AQ96A19 550 aa24.23■■□□□ 1.47
MSH6-206ENST00000455383 PCCAP05165 728 aaPredicted RBP24.22■■□□□ 1.47
MSH6-206ENST00000455383 CCDC191Q8NCU4 936 aa24.22■■□□□ 1.47
MSH6-206ENST00000455383 IFT57Q9NWB7 429 aa24.22■■□□□ 1.47
MSH6-206ENST00000455383 SAGE1Q9NXZ1 904 aa24.22■■□□□ 1.47
MSH6-206ENST00000455383 UFL1O94874 794 aa24.21■■□□□ 1.47
MSH6-206ENST00000455383 ZNF280AP59817 542 aaPredicted RBP24.21■■□□□ 1.47
MSH6-206ENST00000455383 DGKZQ13574 1117 aa24.21■■□□□ 1.47
MSH6-206ENST00000455383 MYD88Q99836 296 aa24.21■■□□□ 1.47
MSH6-206ENST00000455383 GGA1Q9UJY5 639 aa24.21■■□□□ 1.47
MSH6-206ENST00000455383 ASTN2O75129 1339 aaPredicted RBP24.2■■□□□ 1.46
MSH6-206ENST00000455383 PDE8AO60658 829 aa24.2■■□□□ 1.46
MSH6-206ENST00000455383 SLC34A2O95436 690 aa24.2■■□□□ 1.46
MSH6-206ENST00000455383 KIF23Q02241 960 aaPredicted RBP24.2■■□□□ 1.46
MSH6-206ENST00000455383 CCDC152Q4G0S7 254 aa24.2■■□□□ 1.46
MSH6-206ENST00000455383 GGA3Q9NZ52 723 aa24.2■■□□□ 1.46
MSH6-206ENST00000455383 RSBN1LQ6PCB5 846 aaPredicted RBP24.19■■□□□ 1.46
MSH6-206ENST00000455383 SULF1Q8IWU6 871 aa24.19■■□□□ 1.46
MSH6-206ENST00000455383 AGBL3Q8NEM8 1001 aa24.19■■□□□ 1.46
MSH6-206ENST00000455383 ANKIB1Q9P2G1 1089 aa24.19■■□□□ 1.46
MSH6-206ENST00000455383 SLC10A3P09131 477 aa24.18■■□□□ 1.46
MSH6-206ENST00000455383 ZNF157P51786 506 aaPredicted RBP24.18■■□□□ 1.46
MSH6-206ENST00000455383 GNAI1P63096 354 aa24.18■■□□□ 1.46
MSH6-206ENST00000455383 GMLQ99445 158 aa24.18■■□□□ 1.46
MSH6-206ENST00000455383 CWC25Q9NXE8 425 aaPredicted RBP24.18■■□□□ 1.46
MSH6-206ENST00000455383 PSME4Q14997 1843 aa24.18■■□□□ 1.46
MSH6-206ENST00000455383 CDCA5Q96FF9 252 aa24.17■■□□□ 1.46
MSH6-206ENST00000455383 METTL22Q9BUU2 404 aaPredicted RBP24.17■■□□□ 1.46
MSH6-206ENST00000455383 ELL2O00472 640 aaPredicted RBP24.16■■□□□ 1.46
MSH6-206ENST00000455383 CALD1Q05682 793 aaKnown RBP24.16■■□□□ 1.46
MSH6-206ENST00000455383 C8orf58Q8NAV2 365 aa24.16■■□□□ 1.46
MSH6-206ENST00000455383 RNF186Q9NXI6 227 aa24.16■■□□□ 1.46
MSH6-206ENST00000455383 XDHP47989 1333 aa24.15■■□□□ 1.46
MSH6-206ENST00000455383 G3V3G9 751 aa24.15■■□□□ 1.46
MSH6-206ENST00000455383 APAF1O14727 1248 aa24.15■■□□□ 1.46
MSH6-206ENST00000455383 SCARF1Q14162 830 aa24.15■■□□□ 1.46
MSH6-206ENST00000455383 DCAF8Q5TAQ9 597 aa24.15■■□□□ 1.46
MSH6-206ENST00000455383 JARID2Q92833 1246 aaPredicted RBP24.15■■□□□ 1.46
MSH6-206ENST00000455383 ATP2B4P23634 1241 aa24.14■■□□□ 1.45
MSH6-206ENST00000455383 ANGEL2Q5VTE6 544 aaKnown RBP24.14■■□□□ 1.45
MSH6-206ENST00000455383 PODNQ7Z5L7 613 aa24.14■■□□□ 1.45
MSH6-206ENST00000455383 ANKRD18AQ8IVF6 992 aa24.14■■□□□ 1.45
MSH6-206ENST00000455383 CSRNP1Q96S65 589 aa24.14■■□□□ 1.45
MSH6-206ENST00000455383 PRKRIP1Q9H875 184 aaPredicted RBP24.14■■□□□ 1.45
MSH6-206ENST00000455383 PITPNM2Q9BZ72 1349 aa24.13■■□□□ 1.45
MSH6-206ENST00000455383 CCDC85AQ96PX6 553 aaPredicted RBP24.13■■□□□ 1.45
MSH6-206ENST00000455383 DDX58O95786 925 aaKnown RBP24.12■■□□□ 1.45
MSH6-206ENST00000455383 USP17L8P0C7I0 530 aa24.12■■□□□ 1.45
MSH6-206ENST00000455383 FKBP1BP68106 108 aa24.12■■□□□ 1.45
MSH6-206ENST00000455383 REM2Q8IYK8 340 aaPredicted RBP24.12■■□□□ 1.45
MSH6-206ENST00000455383 MYOZ2Q9NPC6 264 aa24.12■■□□□ 1.45
MSH6-206ENST00000455383 USP17L3A6NCW0 530 aa24.11■■□□□ 1.45
MSH6-206ENST00000455383 USP17L4A6NCW7 530 aa24.11■■□□□ 1.45
MSH6-206ENST00000455383 TRPA1O75762 1119 aa24.11■■□□□ 1.45
MSH6-206ENST00000455383 CCDC30Q5VVM6 783 aa24.11■■□□□ 1.45
MSH6-206ENST00000455383 USP17L1Q7RTZ2 530 aa24.11■■□□□ 1.45
MSH6-206ENST00000455383 RASAL3Q86YV0 1011 aa24.11■■□□□ 1.45
MSH6-206ENST00000455383 CHMP4AQ9BY43 222 aa24.11■■□□□ 1.45
MSH6-206ENST00000455383 IGKV5-2P06315 115 aa24.1■■□□□ 1.45
MSH6-206ENST00000455383 CTSWP56202 376 aa24.1■■□□□ 1.45
MSH6-206ENST00000455383 TTLL11Q8NHH1 800 aa24.1■■□□□ 1.45
MSH6-206ENST00000455383 MAP3K2Q9Y2U5 619 aa24.1■■□□□ 1.45
MSH6-206ENST00000455383 MED23Q9ULK4 1368 aa24.1■■□□□ 1.45
MSH6-206ENST00000455383 PAPPA2Q9BXP8 1791 aa24.1■■□□□ 1.45
MSH6-206ENST00000455383 AKAP11Q9UKA4 1901 aa24.1■■□□□ 1.45
MSH6-206ENST00000455383 WTIPA6NIX2 430 aaPredicted RBP24.09■■□□□ 1.45
MSH6-206ENST00000455383 KSR2Q6VAB6 950 aa24.09■■□□□ 1.45
MSH6-206ENST00000455383 CDC5LQ99459 802 aaKnown RBP24.09■■□□□ 1.45
MSH6-206ENST00000455383 BSDC1Q9NW68 430 aaPredicted RBP24.09■■□□□ 1.45
MSH6-206ENST00000455383 MINPP1Q9UNW1 487 aa24.09■■□□□ 1.45
MSH6-206ENST00000455383 TSPYL6Q8N831 410 aa24.08■■□□□ 1.45
MSH6-206ENST00000455383 ZNF646O15015 1829 aaPredicted RBP24.07■■□□□ 1.44
MSH6-206ENST00000455383 PI4KAP2A4QPH2 592 aa24.06■■□□□ 1.44
MSH6-206ENST00000455383 DACT2Q5SW24 774 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 343 ms