RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 KDM4AO75164 1064 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 SMC2O95347 1197 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 SYT1P21579 422 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 WWC2Q6AWC2 1192 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 GIMAP6Q6P9H5 292 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 SALL3Q9BXA9 1300 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 RPS6KA3P51812 740 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 CRYMQ14894 314 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 EXOC4Q96A65 974 aa11.23□□□□□ -0.61
LINC01940-201ENST00000455228 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 IVLP07476 585 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 AK2P54819 239 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 TEX11Q8IYF3 940 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 CNTROBQ8N137 903 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 SPC24Q8NBT2 197 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 CWC27Q6UX04 472 aaKnown RBP11.22□□□□□ -0.61
LINC01940-201ENST00000455228 TRIM74Q86UV6 250 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 TRIM73Q86UV7 250 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 MCM8Q9UJA3 840 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 DLC1Q96QB1 1528 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 VPS37CA5D8V6 355 aaPredicted RBP11.22□□□□□ -0.61
LINC01940-201ENST00000455228 F13A1P00488 732 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 MYBL2P10244 700 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 TMEM87AQ8NBN3 555 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
LINC01940-201ENST00000455228 CASTP20810 708 aaKnown RBP11.21□□□□□ -0.61
LINC01940-201ENST00000455228 AMPHP49418 695 aa11.21□□□□□ -0.61
LINC01940-201ENST00000455228 TEX35Q5T0J7 233 aa11.21□□□□□ -0.61
LINC01940-201ENST00000455228 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
LINC01940-201ENST00000455228 IL25Q9H293 177 aa11.21□□□□□ -0.61
LINC01940-201ENST00000455228 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.61
LINC01940-201ENST00000455228 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
LINC01940-201ENST00000455228 CRB1P82279 1406 aa11.21□□□□□ -0.61
LINC01940-201ENST00000455228 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.61
LINC01940-201ENST00000455228 KCNB2Q92953 911 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 LZTS2Q9BRK4 669 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 SPG7Q9UQ90 795 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 ACEP12821 1306 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 EPB41L2O43491 1005 aaKnown RBP11.21□□□□□ -0.62
LINC01940-201ENST00000455228 CAND2O75155 1236 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 GCFC2P16383 781 aaKnown RBP11.21□□□□□ -0.62
LINC01940-201ENST00000455228 CCDC83Q8IWF9 413 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 TRERF1Q96PN7 1200 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.62
LINC01940-201ENST00000455228 BLOC1S6Q9UL45 172 aa11.21□□□□□ -0.62
LINC01940-201ENST00000455228 METP08581 1390 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 TCHHQ07283 1943 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 AOX1Q06278 1338 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
LINC01940-201ENST00000455228 SRGAP3O43295 1099 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 RAB11FIP3O75154 756 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 TPM1P09493 284 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 SETSIPP0DME0 302 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 CCDC192P0DO97 292 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 HDGFP51858 240 aaKnown RBP11.2□□□□□ -0.62
LINC01940-201ENST00000455228 TPM4P67936 248 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
LINC01940-201ENST00000455228 HSP90B2PQ58FF3 399 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 PPP1R42Q7Z4L9 355 aa11.2□□□□□ -0.62
LINC01940-201ENST00000455228 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
LINC01940-201ENST00000455228 CWC25Q9NXE8 425 aaPredicted RBP11.2□□□□□ -0.62
LINC01940-201ENST00000455228 RPAP1Q9BWH6 1393 aaPredicted RBP11.2□□□□□ -0.62
LINC01940-201ENST00000455228 CPA1P15085 419 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 GJB2P29033 226 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 PRPHP41219 470 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 FBXO38Q6PIJ6 1188 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 DRC7Q8IY82 874 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 USP44Q9H0E7 712 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 KCNF1Q9H3M0 494 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 GNL3LQ9NVN8 582 aaKnown RBP11.19□□□□□ -0.62
LINC01940-201ENST00000455228 GOLGA6L4A6NEF3 574 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 DTNBO60941 627 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 RUFY3Q7L099 469 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 PRR36Q9H6K5 1346 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 EIF3CLB5ME19 914 aaKnown RBP11.19□□□□□ -0.62
LINC01940-201ENST00000455228 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 RUFY2Q8WXA3 655 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 EIF3CQ99613 913 aaKnown RBP11.19□□□□□ -0.62
LINC01940-201ENST00000455228 ST7Q9NRC1 585 aa11.19□□□□□ -0.62
LINC01940-201ENST00000455228 ACTN2P35609 894 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 AP1ARQ63HQ0 302 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 JAKMIP1Q96N16 626 aaKnown RBP11.18□□□□□ -0.62
LINC01940-201ENST00000455228 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 ISM2Q6H9L7 571 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 ERO1AQ96HE7 468 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 ZNF396Q96N95 335 aaPredicted RBP11.18□□□□□ -0.62
LINC01940-201ENST00000455228 A2ML1A8K2U0 1454 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 ARHGEF10O15013 1369 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 GNAT3A8MTJ3 354 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 NAIF1Q69YI7 327 aaPredicted RBP11.18□□□□□ -0.62
LINC01940-201ENST00000455228 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
LINC01940-201ENST00000455228 CCP110O43303 1012 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms