RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CWC25Q9NXE8 425 aaPredicted RBP20.73■□□□□ 0.91
GPC1-206ENST00000455111 TLL2Q9Y6L7 1015 aa20.73■□□□□ 0.91
GPC1-206ENST00000455111 C6orf229H3BNL8 230 aa20.72■□□□□ 0.91
GPC1-206ENST00000455111 PDE8AO60658 829 aa20.72■□□□□ 0.91
GPC1-206ENST00000455111 TNIP1Q15025 636 aa20.72■□□□□ 0.91
GPC1-206ENST00000455111 CWF19L2Q2TBE0 894 aaKnown RBP20.72■□□□□ 0.91
GPC1-206ENST00000455111 KSR2Q6VAB6 950 aa20.72■□□□□ 0.91
GPC1-206ENST00000455111 BCL2L13Q9BXK5 485 aa20.72■□□□□ 0.91
GPC1-206ENST00000455111 A0A1B0GUL6 1792 aa20.72■□□□□ 0.91
GPC1-206ENST00000455111 AOC2O75106 756 aa20.7■□□□□ 0.9
GPC1-206ENST00000455111 HSPA8P11142 646 aaKnown RBP20.7■□□□□ 0.9
GPC1-206ENST00000455111 DPF2Q92785 391 aa20.7■□□□□ 0.9
GPC1-206ENST00000455111 CAPNS2Q96L46 248 aa20.7■□□□□ 0.9
GPC1-206ENST00000455111 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
GPC1-206ENST00000455111 LBX1P52954 281 aa20.69■□□□□ 0.9
GPC1-206ENST00000455111 TWISTNBQ3B726 338 aaPredicted RBP20.69■□□□□ 0.9
GPC1-206ENST00000455111 SAPCD2Q86UD0 394 aa20.69■□□□□ 0.9
GPC1-206ENST00000455111 TTLL11Q8NHH1 800 aa20.69■□□□□ 0.9
GPC1-206ENST00000455111 PRDM10Q9NQV6 1147 aa20.69■□□□□ 0.9
GPC1-206ENST00000455111 ASTN2O75129 1339 aaPredicted RBP20.69■□□□□ 0.9
GPC1-206ENST00000455111 CACNA1FO60840 1977 aa20.68■□□□□ 0.9
GPC1-206ENST00000455111 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
GPC1-206ENST00000455111 CELF2O95319 508 aaKnown RBP20.68■□□□□ 0.9
GPC1-206ENST00000455111 CASP7P55210 303 aa20.68■□□□□ 0.9
GPC1-206ENST00000455111 TBC1D10BQ4KMP7 808 aaPredicted RBP20.68■□□□□ 0.9
GPC1-206ENST00000455111 ZC3H15Q8WU90 426 aaKnown RBP20.68■□□□□ 0.9
GPC1-206ENST00000455111 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
GPC1-206ENST00000455111 UFL1O94874 794 aa20.67■□□□□ 0.9
GPC1-206ENST00000455111 VIL1P09327 827 aaKnown RBP20.67■□□□□ 0.9
GPC1-206ENST00000455111 CTCFP49711 727 aaPredicted RBP20.67■□□□□ 0.9
GPC1-206ENST00000455111 CTSWP56202 376 aa20.67■□□□□ 0.9
GPC1-206ENST00000455111 CCDC152Q4G0S7 254 aa20.67■□□□□ 0.9
GPC1-206ENST00000455111 USP48Q86UV5 1035 aa20.67■□□□□ 0.9
GPC1-206ENST00000455111 GREM2Q9H772 168 aa20.67■□□□□ 0.9
GPC1-206ENST00000455111 IL16Q14005 1332 aa20.67■□□□□ 0.9
GPC1-206ENST00000455111 ZNF609O15014 1411 aa20.67■□□□□ 0.9
GPC1-206ENST00000455111 H7C1W4 665 aa20.66■□□□□ 0.9
GPC1-206ENST00000455111 DDX58O95786 925 aaKnown RBP20.66■□□□□ 0.9
GPC1-206ENST00000455111 ZIC5Q96T25 663 aa20.66■□□□□ 0.9
GPC1-206ENST00000455111 EYA3Q99504 573 aa20.66■□□□□ 0.9
GPC1-206ENST00000455111 VAMP4O75379 141 aa20.65■□□□□ 0.9
GPC1-206ENST00000455111 SLC4A2P04920 1241 aa20.65■□□□□ 0.9
GPC1-206ENST00000455111 NCBP3Q53F19 620 aaKnown RBP20.65■□□□□ 0.9
GPC1-206ENST00000455111 CDC37L1Q7L3B6 337 aa20.65■□□□□ 0.9
GPC1-206ENST00000455111 MRS2Q9HD23 443 aa20.65■□□□□ 0.9
GPC1-206ENST00000455111 GGA1Q9UJY5 639 aa20.65■□□□□ 0.9
GPC1-206ENST00000455111 ADM5C9JUS6 153 aa20.64■□□□□ 0.89
GPC1-206ENST00000455111 H7C1D1 291 aa20.64■□□□□ 0.89
GPC1-206ENST00000455111 GRM1Q13255 1194 aa20.64■□□□□ 0.89
GPC1-206ENST00000455111 GMLQ99445 158 aa20.64■□□□□ 0.89
GPC1-206ENST00000455111 ZC3H12CQ9C0D7 883 aaKnown RBP20.64■□□□□ 0.89
GPC1-206ENST00000455111 ZNF408Q9H9D4 720 aa20.64■□□□□ 0.89
GPC1-206ENST00000455111 ANKIB1Q9P2G1 1089 aa20.64■□□□□ 0.89
GPC1-206ENST00000455111 SALL2Q9Y467 1007 aaPredicted RBP20.64■□□□□ 0.89
GPC1-206ENST00000455111 RPS12P25398 132 aaKnown RBP20.63■□□□□ 0.89
GPC1-206ENST00000455111 FLIIQ13045 1269 aa20.63■□□□□ 0.89
GPC1-206ENST00000455111 RBM26Q5T8P6 1007 aaKnown RBP20.63■□□□□ 0.89
GPC1-206ENST00000455111 TXNRD3Q86VQ6 643 aa20.63■□□□□ 0.89
GPC1-206ENST00000455111 ANKRD18AQ8IVF6 992 aa20.63■□□□□ 0.89
GPC1-206ENST00000455111 MINPP1Q9UNW1 487 aa20.63■□□□□ 0.89
GPC1-206ENST00000455111 XDHP47989 1333 aa20.62■□□□□ 0.89
GPC1-206ENST00000455111 PAXIP1Q6ZW49 1069 aaPredicted RBP20.62■□□□□ 0.89
GPC1-206ENST00000455111 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
GPC1-206ENST00000455111 AIDAQ96BJ3 306 aa20.62■□□□□ 0.89
GPC1-206ENST00000455111 TSKSQ9UJT2 592 aa20.62■□□□□ 0.89
GPC1-206ENST00000455111 KLRK1P26718 216 aa20.61■□□□□ 0.89
GPC1-206ENST00000455111 ZNF280AP59817 542 aaPredicted RBP20.61■□□□□ 0.89
GPC1-206ENST00000455111 MAP2K1Q02750 393 aaPredicted RBP20.61■□□□□ 0.89
GPC1-206ENST00000455111 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
GPC1-206ENST00000455111 GCKRQ14397 625 aa20.61■□□□□ 0.89
GPC1-206ENST00000455111 HHIPL1Q96JK4 782 aa20.61■□□□□ 0.89
GPC1-206ENST00000455111 MXD3Q9BW11 206 aa20.61■□□□□ 0.89
GPC1-206ENST00000455111 STK31Q9BXU1 1019 aa20.61■□□□□ 0.89
GPC1-206ENST00000455111 ZNF316A6NFI3 1004 aaPredicted RBP20.6■□□□□ 0.89
GPC1-206ENST00000455111 ECE1P42892 770 aa20.6■□□□□ 0.89
GPC1-206ENST00000455111 KIF4BQ2VIQ3 1234 aa20.6■□□□□ 0.89
GPC1-206ENST00000455111 RSBN1LQ6PCB5 846 aaPredicted RBP20.6■□□□□ 0.89
GPC1-206ENST00000455111 PLA2G12BQ9BX93 195 aa20.6■□□□□ 0.89
GPC1-206ENST00000455111 BSDC1Q9NW68 430 aaPredicted RBP20.6■□□□□ 0.89
GPC1-206ENST00000455111 HSP90B1P14625 803 aaKnown RBP20.59■□□□□ 0.89
GPC1-206ENST00000455111 ATP2B4P23634 1241 aa20.59■□□□□ 0.89
GPC1-206ENST00000455111 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
GPC1-206ENST00000455111 IRS2Q9Y4H2 1338 aa20.58■□□□□ 0.89
GPC1-206ENST00000455111 FAM155AB1AL88 458 aaPredicted RBP20.58■□□□□ 0.89
GPC1-206ENST00000455111 CSF1RP07333 972 aa20.58■□□□□ 0.89
GPC1-206ENST00000455111 FAM161AQ3B820 660 aa20.58■□□□□ 0.89
GPC1-206ENST00000455111 KRT26Q7Z3Y9 468 aa20.58■□□□□ 0.89
GPC1-206ENST00000455111 WDR63Q8IWG1 891 aa20.58■□□□□ 0.89
GPC1-206ENST00000455111 GGA3Q9NZ52 723 aa20.58■□□□□ 0.89
GPC1-206ENST00000455111 SCAF8Q9UPN6 1271 aaKnown RBP20.58■□□□□ 0.89
GPC1-206ENST00000455111 F6X3S4 739 aa20.57■□□□□ 0.88
GPC1-206ENST00000455111 MAP2K2P36507 400 aa20.57■□□□□ 0.88
GPC1-206ENST00000455111 CCT4P50991 539 aaKnown RBP20.57■□□□□ 0.88
GPC1-206ENST00000455111 NEXNQ0ZGT2 675 aa20.57■□□□□ 0.88
GPC1-206ENST00000455111 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
GPC1-206ENST00000455111 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
GPC1-206ENST00000455111 CASP8AP2Q9UKL3 1982 aa20.56■□□□□ 0.88
GPC1-206ENST00000455111 SNAP23O00161 211 aa20.56■□□□□ 0.88
GPC1-206ENST00000455111 DACT2Q5SW24 774 aa20.56■□□□□ 0.88
GPC1-206ENST00000455111 AGBL3Q8NEM8 1001 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms