RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 IFIT2P09913 472 aaKnown RBP12.66□□□□□ -0.38
GTF3C2-206ENST00000454704 CCDC39Q9UFE4 941 aa12.66□□□□□ -0.38
GTF3C2-206ENST00000454704 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
GTF3C2-206ENST00000454704 GRM8O00222 908 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 PTCD1O75127 700 aaKnown RBP12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 ZKSCAN1P17029 563 aaPredicted RBP12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 PSMA5P28066 241 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 ANKRD1Q15327 319 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 TSHZ3Q63HK5 1081 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 TSPY26PQ9H489 355 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 TMEM63CQ9P1W3 806 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 MAP3K2Q9Y2U5 619 aa12.65□□□□□ -0.38
GTF3C2-206ENST00000454704 SPEF2Q9C093 1822 aa12.65□□□□□ -0.39
GTF3C2-206ENST00000454704 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.39
GTF3C2-206ENST00000454704 ZNF500O60304 480 aaPredicted RBP12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 NEXNQ0ZGT2 675 aa12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 G3BP1Q13283 466 aaKnown RBP eCLIP12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 RNF20Q5VTR2 975 aa12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 NAP1L5Q96NT1 182 aaPredicted RBP12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 ZSWIM6Q9HCJ5 1215 aa12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 CCDC171Q6TFL3 1326 aa12.64□□□□□ -0.39
GTF3C2-206ENST00000454704 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
GTF3C2-206ENST00000454704 UBE2HP62256 183 aa12.63□□□□□ -0.39
GTF3C2-206ENST00000454704 CCDC183Q5T5S1 534 aa12.63□□□□□ -0.39
GTF3C2-206ENST00000454704 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
GTF3C2-206ENST00000454704 CYP46A1Q9Y6A2 500 aa12.63□□□□□ -0.39
GTF3C2-206ENST00000454704 ERBB4Q15303 1308 aa12.63□□□□□ -0.39
GTF3C2-206ENST00000454704 STX6O43752 255 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 OFD1O75665 1012 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 PDCP20941 246 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 AK2P54819 239 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 DDR1Q08345 913 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 SYCE3A1L190 88 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 F13A1P00488 732 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 KCNA3P22001 575 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 KRT32Q14532 448 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 NECTIN1Q15223 517 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 TSGA10IPQ3SY00 556 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 NMRK2Q9NPI5 230 aa12.62□□□□□ -0.39
GTF3C2-206ENST00000454704 APLP1P51693 650 aa12.61□□□□□ -0.39
GTF3C2-206ENST00000454704 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
GTF3C2-206ENST00000454704 CWC27Q6UX04 472 aaKnown RBP12.61□□□□□ -0.39
GTF3C2-206ENST00000454704 RUFY3Q7L099 469 aa12.61□□□□□ -0.39
GTF3C2-206ENST00000454704 MAP4K1Q92918 833 aa12.61□□□□□ -0.39
GTF3C2-206ENST00000454704 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
GTF3C2-206ENST00000454704 ZKSCAN5Q9Y2L8 839 aa12.61□□□□□ -0.39
GTF3C2-206ENST00000454704 UBR2Q8IWV8 1755 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 MED23Q9ULK4 1368 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 KCNQ3O43525 872 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 TOMM70O94826 608 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 DALRD3Q5D0E6 543 aaKnown RBP12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 INTS5Q6P9B9 1019 aaKnown RBP12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 AACSQ86V21 672 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 CHMP4CQ96CF2 233 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 IL25Q9H293 177 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 SLC52A2Q9HAB3 445 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 COPRSQ9NQ92 184 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
GTF3C2-206ENST00000454704 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 RRP9O43818 475 aaKnown RBP12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 SYT1P21579 422 aa12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 CHRNA5P30532 468 aa12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 METTL22Q9BUU2 404 aaPredicted RBP12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 ELP1O95163 1332 aa12.59□□□□□ -0.39
GTF3C2-206ENST00000454704 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 TPM3P06753 285 aa12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 RIC3Q7Z5B4 369 aa12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 SUCLG2Q96I99 432 aa12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 JAKMIP1Q96N16 626 aaKnown RBP12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
GTF3C2-206ENST00000454704 NEURL1BA8MQ27 555 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 ZPR1O75312 459 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 SASH1O94885 1247 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 GCKRQ14397 625 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 PDIA6Q15084 440 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 CREB3L3Q68CJ9 461 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 BICC1Q9H694 974 aaKnown RBP12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 SBF1O95248 1867 aa12.57□□□□□ -0.4
GTF3C2-206ENST00000454704 MAP4K4O95819 1239 aaPredicted RBP12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms