RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
DDR1-240ENST00000454612 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDR1-240ENST00000454612 TAF6LQ9Y6J9 622 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 V9GYY5 206 aaPredicted RBP13.14□□□□□ -0.31
DDR1-240ENST00000454612 IBTKQ9P2D0 1353 aaPredicted RBP13.14□□□□□ -0.31
DDR1-240ENST00000454612 HIP1O00291 1037 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 SLC27A2O14975 620 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 UBE2HP62256 183 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 ANO6Q4KMQ2 910 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 LDHAL6AQ6ZMR3 332 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 PDILTQ8N807 584 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 RAD50Q92878 1312 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 JAG2Q9Y219 1238 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 ARHGEF10O15013 1369 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 STRCP1A6NGW2 1772 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
DDR1-240ENST00000454612 LIG1P18858 919 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 MARCKSP29966 332 aaPredicted RBP13.12□□□□□ -0.31
DDR1-240ENST00000454612 CCDC24Q8N4L8 307 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 CCDC186Q7Z3E2 898 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
DDR1-240ENST00000454612 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 SASH1O94885 1247 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 ZNF165P49910 485 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 ANAPC15P60006 121 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 GCKRQ14397 625 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
DDR1-240ENST00000454612 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
DDR1-240ENST00000454612 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 TOPAZ1Q8N9V7 1692 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 SNAP23O00161 211 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
DDR1-240ENST00000454612 PTPN21Q16825 1174 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
DDR1-240ENST00000454612 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 ZKSCAN5Q9Y2L8 839 aa13.11□□□□□ -0.31
DDR1-240ENST00000454612 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 OFD1O75665 1012 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 PTGS1P23219 599 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 TRIM29Q14134 588 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
DDR1-240ENST00000454612 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
DDR1-240ENST00000454612 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
DDR1-240ENST00000454612 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 ZKSCAN3Q9BRR0 538 aa13.1□□□□□ -0.31
DDR1-240ENST00000454612 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
DDR1-240ENST00000454612 COL9A3Q14050 684 aaPredicted RBP13.09□□□□□ -0.31
DDR1-240ENST00000454612 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 GJB4Q9NTQ9 266 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 KDRP35968 1356 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 NEURL1BA8MQ27 555 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 TNNI3KQ59H18 835 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
DDR1-240ENST00000454612 FPGT-TNNI3KV9GXZ4 949 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 NRDCO43847 1150 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 SPATA31A3Q5VYP0 1347 aa13.09□□□□□ -0.31
DDR1-240ENST00000454612 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
DDR1-240ENST00000454612 ZNF445P59923 1031 aa13.08□□□□□ -0.31
DDR1-240ENST00000454612 CPLX2Q6PUV4 134 aaKnown RBP13.08□□□□□ -0.31
DDR1-240ENST00000454612 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.31
DDR1-240ENST00000454612 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.32
DDR1-240ENST00000454612 A0A1B0GVL5 298 aa13.08□□□□□ -0.32
DDR1-240ENST00000454612 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
DDR1-240ENST00000454612 TTC6Q86TZ1 520 aa13.08□□□□□ -0.32
DDR1-240ENST00000454612 PAG1Q9NWQ8 432 aa13.08□□□□□ -0.32
DDR1-240ENST00000454612 MCMDC2Q4G0Z9 681 aa13.08□□□□□ -0.32
DDR1-240ENST00000454612 ORC3Q9UBD5 711 aaPredicted RBP13.08□□□□□ -0.32
DDR1-240ENST00000454612 TNS3Q68CZ2 1445 aa13.08□□□□□ -0.32
DDR1-240ENST00000454612 KCNQ4P56696 695 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 LRMPQ12912 555 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 NOLC1Q14978 699 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDR1-240ENST00000454612 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 A0A1B0GUL7 405 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 SPECC1Q5M775 1068 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 INTS4Q96HW7 963 aaKnown RBP13.07□□□□□ -0.32
DDR1-240ENST00000454612 SLC52A2Q9HAB3 445 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 TYRO3Q06418 890 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
DDR1-240ENST00000454612 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
DDR1-240ENST00000454612 TDO2P48775 406 aa13.07□□□□□ -0.32
DDR1-240ENST00000454612 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
DDR1-240ENST00000454612 SCAND2PQ9GZW5 306 aaPredicted RBP13.07□□□□□ -0.32
DDR1-240ENST00000454612 LRP2BPQ9P2M1 347 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms