RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 SAGE1Q9NXZ1 904 aa33.34■■■□□ 2.93
NEK6-211ENST00000454453 TRIM35Q9UPQ4 493 aa33.34■■■□□ 2.93
NEK6-211ENST00000454453 HDGFL1Q5TGJ6 251 aa33.33■■■□□ 2.93
NEK6-211ENST00000454453 CCDC146Q8IYE0 955 aa33.33■■■□□ 2.93
NEK6-211ENST00000454453 ZNF157P51786 506 aaPredicted RBP33.32■■■□□ 2.92
NEK6-211ENST00000454453 KIF4BQ2VIQ3 1234 aa33.32■■■□□ 2.92
NEK6-211ENST00000454453 CCDC102AQ96A19 550 aa33.32■■■□□ 2.92
NEK6-211ENST00000454453 RNF186Q9NXI6 227 aa33.32■■■□□ 2.92
NEK6-211ENST00000454453 LAS1LQ9Y4W2 734 aaKnown RBP33.32■■■□□ 2.92
NEK6-211ENST00000454453 VIL1P09327 827 aaKnown RBP33.31■■■□□ 2.92
NEK6-211ENST00000454453 EYA3Q99504 573 aa33.31■■■□□ 2.92
NEK6-211ENST00000454453 GGA3Q9NZ52 723 aa33.3■■■□□ 2.92
NEK6-211ENST00000454453 IRS4O14654 1257 aaPredicted RBP33.29■■■□□ 2.92
NEK6-211ENST00000454453 TRPA1O75762 1119 aa33.29■■■□□ 2.92
NEK6-211ENST00000454453 SLC10A3P09131 477 aa33.29■■■□□ 2.92
NEK6-211ENST00000454453 RPS8P62241 208 aaKnown RBP33.29■■■□□ 2.92
NEK6-211ENST00000454453 DBF4Q9UBU7 674 aaPredicted RBP33.29■■■□□ 2.92
NEK6-211ENST00000454453 HOXB7P09629 217 aa33.28■■■□□ 2.92
NEK6-211ENST00000454453 TRIM28Q13263 835 aaKnown RBP33.28■■■□□ 2.92
NEK6-211ENST00000454453 CSRNP1Q96S65 589 aa33.28■■■□□ 2.92
NEK6-211ENST00000454453 SEC31BQ9NQW1 1179 aa33.28■■■□□ 2.92
NEK6-211ENST00000454453 PODXL2Q9NZ53 605 aa33.27■■■□□ 2.92
NEK6-211ENST00000454453 CDCA5Q96FF9 252 aa33.26■■■□□ 2.91
NEK6-211ENST00000454453 SOX10P56693 466 aa33.24■■■□□ 2.91
NEK6-211ENST00000454453 SULF1Q8IWU6 871 aa33.24■■■□□ 2.91
NEK6-211ENST00000454453 ZC3H12CQ9C0D7 883 aaKnown RBP33.24■■■□□ 2.91
NEK6-211ENST00000454453 AKAP11Q9UKA4 1901 aa33.24■■■□□ 2.91
NEK6-211ENST00000454453 ZNF609O15014 1411 aa33.23■■■□□ 2.91
NEK6-211ENST00000454453 ZNF280AP59817 542 aaPredicted RBP33.23■■■□□ 2.91
NEK6-211ENST00000454453 RALBP1Q15311 655 aa33.23■■■□□ 2.91
NEK6-211ENST00000454453 HYPKQ9NX55 129 aa33.23■■■□□ 2.91
NEK6-211ENST00000454453 UFL1O94874 794 aa33.22■■■□□ 2.91
NEK6-211ENST00000454453 DUSP27Q5VZP5 1158 aa33.22■■■□□ 2.91
NEK6-211ENST00000454453 SCARF1Q14162 830 aa33.21■■■□□ 2.91
NEK6-211ENST00000454453 ANGEL2Q5VTE6 544 aaKnown RBP33.21■■■□□ 2.91
NEK6-211ENST00000454453 RASAL3Q86YV0 1011 aa33.21■■■□□ 2.91
NEK6-211ENST00000454453 ZBTB38Q8NAP3 1195 aaPredicted RBP33.21■■■□□ 2.91
NEK6-211ENST00000454453 PSME4Q14997 1843 aa33.21■■■□□ 2.91
NEK6-211ENST00000454453 RUNDC1Q96C34 613 aa33.2■■■□□ 2.91
NEK6-211ENST00000454453 RSBN1LQ6PCB5 846 aaPredicted RBP33.19■■■□□ 2.9
NEK6-211ENST00000454453 GMLQ99445 158 aa33.19■■■□□ 2.9
NEK6-211ENST00000454453 PHAXQ9H814 394 aaKnown RBP33.19■■■□□ 2.9
NEK6-211ENST00000454453 ANKIB1Q9P2G1 1089 aa33.19■■■□□ 2.9
NEK6-211ENST00000454453 GGA1Q9UJY5 639 aa33.19■■■□□ 2.9
NEK6-211ENST00000454453 AGBL3Q8NEM8 1001 aa33.18■■■□□ 2.9
NEK6-211ENST00000454453 MBIPQ9NS73 344 aa33.17■■■□□ 2.9
NEK6-211ENST00000454453 SCAF8Q9UPN6 1271 aaKnown RBP33.17■■■□□ 2.9
NEK6-211ENST00000454453 RIC3Q7Z5B4 369 aa33.16■■■□□ 2.9
NEK6-211ENST00000454453 PAPPA2Q9BXP8 1791 aa33.16■■■□□ 2.9
NEK6-211ENST00000454453 MOB2Q70IA6 237 aa33.15■■■□□ 2.9
NEK6-211ENST00000454453 CTU1Q7Z7A3 348 aaKnown RBP33.15■■■□□ 2.9
NEK6-211ENST00000454453 JARID2Q92833 1246 aaPredicted RBP33.15■■■□□ 2.9
NEK6-211ENST00000454453 WTIPA6NIX2 430 aaPredicted RBP33.14■■■□□ 2.9
NEK6-211ENST00000454453 G3V3G9 751 aa33.14■■■□□ 2.9
NEK6-211ENST00000454453 DCAF8Q5TAQ9 597 aa33.14■■■□□ 2.9
NEK6-211ENST00000454453 CCDC85AQ96PX6 553 aaPredicted RBP33.14■■■□□ 2.9
NEK6-211ENST00000454453 MYD88Q99836 296 aa33.14■■■□□ 2.9
NEK6-211ENST00000454453 MYOZ2Q9NPC6 264 aa33.13■■■□□ 2.89
NEK6-211ENST00000454453 PCDH10Q9P2E7 1040 aa33.13■■■□□ 2.89
NEK6-211ENST00000454453 MYBBP1AQ9BQG0 1328 aaKnown RBP33.12■■■□□ 2.89
NEK6-211ENST00000454453 PCCAP05165 728 aaPredicted RBP33.12■■■□□ 2.89
NEK6-211ENST00000454453 PDE4DIPQ5VU43 2346 aa33.12■■■□□ 2.89
NEK6-211ENST00000454453 ZNF853P0CG23 659 aa33.11■■■□□ 2.89
NEK6-211ENST00000454453 FKBP1BP68106 108 aa33.11■■■□□ 2.89
NEK6-211ENST00000454453 CCDC152Q4G0S7 254 aa33.11■■■□□ 2.89
NEK6-211ENST00000454453 ADAMTS8Q9UP79 889 aa33.11■■■□□ 2.89
NEK6-211ENST00000454453 ZNF646O15015 1829 aaPredicted RBP33.11■■■□□ 2.89
NEK6-211ENST00000454453 PITPNM2Q9BZ72 1349 aa33.1■■■□□ 2.89
NEK6-211ENST00000454453 PDE8AO60658 829 aa33.1■■■□□ 2.89
NEK6-211ENST00000454453 USP17L8P0C7I0 530 aa33.1■■■□□ 2.89
NEK6-211ENST00000454453 GOLGA2Q08379 1002 aa33.1■■■□□ 2.89
NEK6-211ENST00000454453 REM2Q8IYK8 340 aaPredicted RBP33.1■■■□□ 2.89
NEK6-211ENST00000454453 CCDC191Q8NCU4 936 aa33.09■■■□□ 2.89
NEK6-211ENST00000454453 XDHP47989 1333 aa33.08■■■□□ 2.89
NEK6-211ENST00000454453 PRAMEF18Q5VWM3 479 aa33.08■■■□□ 2.89
NEK6-211ENST00000454453 HPS5Q9UPZ3 1129 aa33.07■■■□□ 2.88
NEK6-211ENST00000454453 USP17L3A6NCW0 530 aa33.06■■■□□ 2.88
NEK6-211ENST00000454453 USP17L4A6NCW7 530 aa33.06■■■□□ 2.88
NEK6-211ENST00000454453 UBE2Q2LH0YL09 131 aa33.06■■■□□ 2.88
NEK6-211ENST00000454453 ELL2O00472 640 aaPredicted RBP33.06■■■□□ 2.88
NEK6-211ENST00000454453 NBPF9Q3BBW0 867 aa33.06■■■□□ 2.88
NEK6-211ENST00000454453 USP17L1Q7RTZ2 530 aa33.06■■■□□ 2.88
NEK6-211ENST00000454453 PODNQ7Z5L7 613 aa33.06■■■□□ 2.88
NEK6-211ENST00000454453 HSP90B1P14625 803 aaKnown RBP33.05■■■□□ 2.88
NEK6-211ENST00000454453 ATP2B4P23634 1241 aa33.05■■■□□ 2.88
NEK6-211ENST00000454453 WDR43Q15061 677 aaKnown RBP eCLIP33.05■■■□□ 2.88
NEK6-211ENST00000454453 ANKRD18AQ8IVF6 992 aa33.05■■■□□ 2.88
NEK6-211ENST00000454453 MXD3Q9BW11 206 aa33.05■■■□□ 2.88
NEK6-211ENST00000454453 CWC25Q9NXE8 425 aaPredicted RBP33.05■■■□□ 2.88
NEK6-211ENST00000454453 TBC1D8O95759 1140 aa33.04■■■□□ 2.88
NEK6-211ENST00000454453 ZNF296Q8WUU4 475 aaPredicted RBP33.04■■■□□ 2.88
NEK6-211ENST00000454453 METTL22Q9BUU2 404 aaPredicted RBP33.03■■■□□ 2.88
NEK6-211ENST00000454453 DACT2Q5SW24 774 aa33.01■■■□□ 2.87
NEK6-211ENST00000454453 SPEF2Q9C093 1822 aa33■■■□□ 2.87
NEK6-211ENST00000454453 MED23Q9ULK4 1368 aa33■■■□□ 2.87
NEK6-211ENST00000454453 C8orf58Q8NAV2 365 aa33■■■□□ 2.87
NEK6-211ENST00000454453 CTSWP56202 376 aa32.99■■■□□ 2.87
NEK6-211ENST00000454453 IFT57Q9NWB7 429 aa32.99■■■□□ 2.87
NEK6-211ENST00000454453 MINPP1Q9UNW1 487 aa32.99■■■□□ 2.87
NEK6-211ENST00000454453 WNT10BO00744 389 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms