RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TNIP1Q15025 636 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 WASHC4Q2M389 1173 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 DUSP27Q5VZP5 1158 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MOB2Q70IA6 237 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 PLBD2Q8NHP8 589 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 TBC1D16Q8TBP0 767 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MXD3Q9BW11 206 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 PHAXQ9H814 394 aaKnown RBP7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 GBA2Q9HCG7 927 aaPredicted RBP7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MBIPQ9NS73 344 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 AKAP11Q9UKA4 1901 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 PAPPA2Q9BXP8 1791 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MYBBP1AQ9BQG0 1328 aaKnown RBP7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 H7C1D1 291 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MAP2K2P36507 400 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 NOGQ13253 232 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ANGEL2Q5VTE6 544 aaKnown RBP7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 PRAMEF18Q5VWM3 479 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 CDC37L1Q7L3B6 337 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 CDCA5Q96FF9 252 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MYD88Q99836 296 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MYH3P11055 1940 aa7.81□□□□□ -1.16
HLA-DPA3-207ENST00000454398 TRPA1O75762 1119 aa7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 KLRK1P26718 216 aa7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ZNF157P51786 506 aaPredicted RBP7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 KIF23Q02241 960 aaPredicted RBP7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MKRN3Q13064 507 aaKnown RBP7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 DDX10Q13206 875 aaKnown RBP7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 WDR43Q15061 677 aaKnown RBP eCLIP7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ANKRD13DQ6ZTN6 518 aa7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RASAL3Q86YV0 1011 aa7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 FBXW7Q969H0 707 aa7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ANKIB1Q9P2G1 1089 aa7.8□□□□□ -1.16
HLA-DPA3-207ENST00000454398 A0A1B0GUL6 1792 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 CA12O43570 354 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 SASH1O94885 1247 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 SLC10A3P09131 477 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 GOLGA2Q08379 1002 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 SF3B3Q15393 1217 aaKnown RBP7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RGMBQ6NW40 437 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RIC3Q7Z5B4 369 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 SULF1Q8IWU6 871 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ZC3H15Q8WU90 426 aaKnown RBP7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RUNDC1Q96C34 613 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 DCPSQ96C86 337 aaKnown RBP7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 HHIPL1Q96JK4 782 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 GMLQ99445 158 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 VPS33BQ9H267 617 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 PNNQ9H307 717 aaKnown RBP7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 DBF4Q9UBU7 674 aaPredicted RBP7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ADAMTS8Q9UP79 889 aa7.79□□□□□ -1.16
HLA-DPA3-207ENST00000454398 AOX1Q06278 1338 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ZNF853P0CG23 659 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RPS8P62241 208 aaKnown RBP7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RALBP1Q15311 655 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 TMC4Q7Z404 712 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 DPF2Q92785 391 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 TSR2Q969E8 191 aaKnown RBP7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 R3HDMLQ9H3Y0 253 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 BABAM1Q9NWV8 329 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RNF186Q9NXI6 227 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 GGA1Q9UJY5 639 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 FZD1Q9UP38 647 aa7.78□□□□□ -1.16
HLA-DPA3-207ENST00000454398 G3V3G9 751 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 APAF1O14727 1248 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 RPS12P25398 132 aaKnown RBP7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CTSWP56202 376 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CAP1Q01518 475 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PRKG1Q13976 671 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 SCARF1Q14162 830 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CWF19L2Q2TBE0 894 aaKnown RBP7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 NBPF9Q3BBW0 867 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CCDC184Q52MB2 194 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 DCAF8Q5TAQ9 597 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 RSBN1LQ6PCB5 846 aaPredicted RBP7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 TXNRD3Q86VQ6 643 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 TSPYL6Q8N831 410 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 C2orf69Q8N8R5 385 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ZBTB38Q8NAP3 1195 aaPredicted RBP7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 C8orf58Q8NAV2 365 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 EYA3Q99504 573 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 HYPKQ9NX55 129 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ZNF609O15014 1411 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 OTOFQ9HC10 1997 aa7.77□□□□□ -1.17
HLA-DPA3-207ENST00000454398 SSC5DA1L4H1 1573 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 UBE2Q2LH0YL09 131 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 VIL1P09327 827 aaKnown RBP7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 HOXB7P09629 217 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ZNF280AP59817 542 aaPredicted RBP7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 TTLL12Q14166 644 aaPredicted RBP7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CCDC152Q4G0S7 254 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CSRNP1Q96S65 589 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ZC3H12CQ9C0D7 883 aaKnown RBP7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 GREM2Q9H772 168 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 MYOZ2Q9NPC6 264 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CWC25Q9NXE8 425 aaPredicted RBP7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 JAG2Q9Y219 1238 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 MAP3K2Q9Y2U5 619 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PCDHAC2Q9Y5I4 1007 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms