RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 VGLL2Q8N8G2 317 aa25.89■■□□□ 1.73
CTU2-202ENST00000453996 CARMIL3Q8ND23 1372 aa25.88■■□□□ 1.73
CTU2-202ENST00000453996 SF3B3Q15393 1217 aaKnown RBP25.88■■□□□ 1.73
CTU2-202ENST00000453996 PROM2Q8N271 834 aa25.88■■□□□ 1.73
CTU2-202ENST00000453996 MPHOSPH8Q99549 860 aa25.88■■□□□ 1.73
CTU2-202ENST00000453996 IL25Q9H293 177 aa25.88■■□□□ 1.73
CTU2-202ENST00000453996 RFX7Q2KHR2 1363 aa25.88■■□□□ 1.73
CTU2-202ENST00000453996 RGPD3A6NKT7 1758 aaPredicted RBP25.88■■□□□ 1.73
CTU2-202ENST00000453996 RGPD4Q7Z3J3 1758 aa25.88■■□□□ 1.73
CTU2-202ENST00000453996 APBA3O96018 575 aa25.87■■□□□ 1.73
CTU2-202ENST00000453996 IGHMBP2P38935 993 aaKnown RBP25.87■■□□□ 1.73
CTU2-202ENST00000453996 GORABQ5T7V8 394 aa25.87■■□□□ 1.73
CTU2-202ENST00000453996 TPTE2Q6XPS3 522 aa25.87■■□□□ 1.73
CTU2-202ENST00000453996 XAGE2Q96GT9 111 aa25.87■■□□□ 1.73
CTU2-202ENST00000453996 DNAJC2Q99543 621 aaKnown RBP25.87■■□□□ 1.73
CTU2-202ENST00000453996 TBC1D2Q9BYX2 928 aa25.87■■□□□ 1.73
CTU2-202ENST00000453996 PDE8BO95263 885 aa25.87■■□□□ 1.73
CTU2-202ENST00000453996 CCDC158Q5M9N0 1113 aa25.87■■□□□ 1.73
CTU2-202ENST00000453996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.87■■□□□ 1.73
CTU2-202ENST00000453996 CDC5LQ99459 802 aaKnown RBP25.87■■□□□ 1.73
CTU2-202ENST00000453996 MCCP23508 829 aa25.86■■□□□ 1.73
CTU2-202ENST00000453996 POTEAQ6S8J7 498 aa25.86■■□□□ 1.73
CTU2-202ENST00000453996 ADORA1P30542 326 aa25.85■■□□□ 1.73
CTU2-202ENST00000453996 EDC3Q96F86 508 aaKnown RBP25.85■■□□□ 1.73
CTU2-202ENST00000453996 IFIT1P09914 478 aaKnown RBP25.84■■□□□ 1.73
CTU2-202ENST00000453996 TTC39AQ5SRH9 613 aa25.84■■□□□ 1.73
CTU2-202ENST00000453996 C3orf67Q6ZVT6 689 aa25.84■■□□□ 1.73
CTU2-202ENST00000453996 PUM3Q15397 648 aaKnown RBP25.84■■□□□ 1.73
CTU2-202ENST00000453996 NDUFB9Q9Y6M9 179 aa25.84■■□□□ 1.73
CTU2-202ENST00000453996 RAD50Q92878 1312 aa25.84■■□□□ 1.73
CTU2-202ENST00000453996 COL4A1P02462 1669 aa25.84■■□□□ 1.73
CTU2-202ENST00000453996 A0A1B0GUL6 1792 aa25.83■■□□□ 1.73
CTU2-202ENST00000453996 NFIXQ14938 502 aa25.83■■□□□ 1.73
CTU2-202ENST00000453996 RABEP1Q15276 862 aa25.83■■□□□ 1.73
CTU2-202ENST00000453996 KIAA1211Q6ZU35 1233 aa25.83■■□□□ 1.73
CTU2-202ENST00000453996 HSCBQ8IWL3 235 aa25.83■■□□□ 1.73
CTU2-202ENST00000453996 SNX21Q969T3 373 aa25.83■■□□□ 1.73
CTU2-202ENST00000453996 PAG1Q9NWQ8 432 aa25.83■■□□□ 1.73
CTU2-202ENST00000453996 NMIQ13287 307 aaPredicted RBP25.82■■□□□ 1.72
CTU2-202ENST00000453996 NLRP3Q96P20 1036 aa25.82■■□□□ 1.72
CTU2-202ENST00000453996 TAF1P21675 1872 aa25.82■■□□□ 1.72
CTU2-202ENST00000453996 TNRC6CQ9HCJ0 1690 aaKnown RBP25.82■■□□□ 1.72
CTU2-202ENST00000453996 GYS1P13807 737 aa25.82■■□□□ 1.72
CTU2-202ENST00000453996 DDX46Q7L014 1031 aaKnown RBP25.82■■□□□ 1.72
CTU2-202ENST00000453996 NPHP1O15259 732 aa25.81■■□□□ 1.72
CTU2-202ENST00000453996 ANKRD18AQ8IVF6 992 aa25.81■■□□□ 1.72
CTU2-202ENST00000453996 KBTBD3Q8NAB2 608 aa25.81■■□□□ 1.72
CTU2-202ENST00000453996 LPIN2Q92539 896 aa25.81■■□□□ 1.72
CTU2-202ENST00000453996 FAM227BQ96M60 508 aa25.81■■□□□ 1.72
CTU2-202ENST00000453996 LSG1Q9H089 658 aaKnown RBP25.81■■□□□ 1.72
CTU2-202ENST00000453996 GOLIM4O00461 696 aa25.8■■□□□ 1.72
CTU2-202ENST00000453996 TICAM2Q86XR7 235 aa25.8■■□□□ 1.72
CTU2-202ENST00000453996 FGFR2P21802 821 aa25.79■■□□□ 1.72
CTU2-202ENST00000453996 HELBQ8NG08 1087 aaPredicted RBP25.79■■□□□ 1.72
CTU2-202ENST00000453996 SNRKQ9NRH2 765 aa25.79■■□□□ 1.72
CTU2-202ENST00000453996 ANAPC15P60006 121 aa25.79■■□□□ 1.72
CTU2-202ENST00000453996 CNBD1Q8NA66 436 aa25.79■■□□□ 1.72
CTU2-202ENST00000453996 A0A0D9SFI3 127 aa25.78■■□□□ 1.72
CTU2-202ENST00000453996 SLC5A1P13866 664 aa25.78■■□□□ 1.72
CTU2-202ENST00000453996 AKAP11Q9UKA4 1901 aa25.78■■□□□ 1.72
CTU2-202ENST00000453996 MED23Q9ULK4 1368 aa25.78■■□□□ 1.72
CTU2-202ENST00000453996 AKT1S1Q96B36 256 aa25.77■■□□□ 1.72
CTU2-202ENST00000453996 ZNF512BQ96KM6 892 aaPredicted RBP25.77■■□□□ 1.72
CTU2-202ENST00000453996 TFCP2L1Q9NZI6 479 aa25.77■■□□□ 1.72
CTU2-202ENST00000453996 HSPA4P34932 840 aa25.77■■□□□ 1.72
CTU2-202ENST00000453996 ZNF827Q17R98 1081 aa25.77■■□□□ 1.72
CTU2-202ENST00000453996 CCDC24Q8N4L8 307 aa25.77■■□□□ 1.72
CTU2-202ENST00000453996 BSDC1Q9NW68 430 aaPredicted RBP25.77■■□□□ 1.72
CTU2-202ENST00000453996 CHRNDQ07001 517 aa25.76■■□□□ 1.71
CTU2-202ENST00000453996 TAF5LO75529 589 aa25.75■■□□□ 1.71
CTU2-202ENST00000453996 FKBP4Q02790 459 aaKnown RBP eCLIP25.75■■□□□ 1.71
CTU2-202ENST00000453996 IL17RAQ96F46 866 aa25.75■■□□□ 1.71
CTU2-202ENST00000453996 PALD1Q9ULE6 856 aa25.75■■□□□ 1.71
CTU2-202ENST00000453996 CCDC171Q6TFL3 1326 aa25.75■■□□□ 1.71
CTU2-202ENST00000453996 SCARF1Q14162 830 aa25.74■■□□□ 1.71
CTU2-202ENST00000453996 MYH7P12883 1935 aa25.74■■□□□ 1.71
CTU2-202ENST00000453996 UQCRFS1P1P0C7P4 283 aa25.74■■□□□ 1.71
CTU2-202ENST00000453996 TM4SF1P30408 202 aa25.74■■□□□ 1.71
CTU2-202ENST00000453996 CCDC102BQ68D86 513 aa25.74■■□□□ 1.71
CTU2-202ENST00000453996 CELF1Q92879 486 aaKnown RBP25.74■■□□□ 1.71
CTU2-202ENST00000453996 ARID4AP29374 1257 aaPredicted RBP25.73■■□□□ 1.71
CTU2-202ENST00000453996 PRR5LQ6MZQ0 368 aa25.73■■□□□ 1.71
CTU2-202ENST00000453996 MCAMP43121 646 aa25.72■■□□□ 1.71
CTU2-202ENST00000453996 PTH1RQ03431 593 aa25.72■■□□□ 1.71
CTU2-202ENST00000453996 LRRFIP1Q32MZ4 808 aaKnown RBP25.72■■□□□ 1.71
CTU2-202ENST00000453996 ANTXR1Q9H6X2 564 aa25.72■■□□□ 1.71
CTU2-202ENST00000453996 CD2BP2O95400 341 aaKnown RBP25.72■■□□□ 1.71
CTU2-202ENST00000453996 ZAP70P43403 619 aa25.72■■□□□ 1.71
CTU2-202ENST00000453996 PHKA1P46020 1223 aa25.72■■□□□ 1.71
CTU2-202ENST00000453996 RPS8P62241 208 aaKnown RBP25.72■■□□□ 1.71
CTU2-202ENST00000453996 FLAD1Q8NFF5 587 aa25.72■■□□□ 1.71
CTU2-202ENST00000453996 ST18O60284 1047 aa25.71■■□□□ 1.71
CTU2-202ENST00000453996 SERPINB2P05120 415 aa25.71■■□□□ 1.71
CTU2-202ENST00000453996 ST5P78524 1137 aa25.71■■□□□ 1.71
CTU2-202ENST00000453996 K7ELQ4 463 aaPredicted RBP25.7■■□□□ 1.7
CTU2-202ENST00000453996 MCMDC2Q4G0Z9 681 aa25.7■■□□□ 1.7
CTU2-202ENST00000453996 ZNF589Q86UQ0 364 aaPredicted RBP25.7■■□□□ 1.7
CTU2-202ENST00000453996 MINPP1Q9UNW1 487 aa25.7■■□□□ 1.7
CTU2-202ENST00000453996 SNAP23O00161 211 aa25.69■■□□□ 1.7
CTU2-202ENST00000453996 HELLSQ9NRZ9 838 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms