RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 TBC1D16Q8TBP0 767 aa28.46■■■□□ 2.15
HMG20B-206ENST00000453933 CSRNP1Q96S65 589 aa28.46■■■□□ 2.15
HMG20B-206ENST00000453933 EYA3Q99504 573 aa28.46■■■□□ 2.15
HMG20B-206ENST00000453933 COL4A1P02462 1669 aa28.45■■■□□ 2.15
HMG20B-206ENST00000453933 CHL1O00533 1208 aa28.45■■■□□ 2.14
HMG20B-206ENST00000453933 SLC10A3P09131 477 aa28.44■■■□□ 2.14
HMG20B-206ENST00000453933 LMOD3Q0VAK6 560 aa28.44■■■□□ 2.14
HMG20B-206ENST00000453933 SULF1Q8IWU6 871 aa28.44■■■□□ 2.14
HMG20B-206ENST00000453933 GGA3Q9NZ52 723 aa28.44■■■□□ 2.14
HMG20B-206ENST00000453933 VIL1P09327 827 aaKnown RBP28.43■■■□□ 2.14
HMG20B-206ENST00000453933 RPS8P62241 208 aaKnown RBP28.43■■■□□ 2.14
HMG20B-206ENST00000453933 CDCA5Q96FF9 252 aa28.42■■■□□ 2.14
HMG20B-206ENST00000453933 ZC3H12CQ9C0D7 883 aaKnown RBP28.42■■■□□ 2.14
HMG20B-206ENST00000453933 DDX60Q8IY21 1712 aaKnown RBP28.42■■■□□ 2.14
HMG20B-206ENST00000453933 NEUROD2Q15784 382 aa28.41■■■□□ 2.14
HMG20B-206ENST00000453933 HDGFL1Q5TGJ6 251 aa28.41■■■□□ 2.14
HMG20B-206ENST00000453933 LAS1LQ9Y4W2 734 aaKnown RBP28.41■■■□□ 2.14
HMG20B-206ENST00000453933 IRS4O14654 1257 aaPredicted RBP28.4■■■□□ 2.14
HMG20B-206ENST00000453933 POLR2AP24928 1970 aaKnown RBP28.39■■■□□ 2.13
HMG20B-206ENST00000453933 SCARF1Q14162 830 aa28.38■■■□□ 2.13
HMG20B-206ENST00000453933 CTU1Q7Z7A3 348 aaKnown RBP28.38■■■□□ 2.13
HMG20B-206ENST00000453933 SEC31BQ9NQW1 1179 aa28.38■■■□□ 2.13
HMG20B-206ENST00000453933 PODXL2Q9NZ53 605 aa28.38■■■□□ 2.13
HMG20B-206ENST00000453933 DBF4Q9UBU7 674 aaPredicted RBP28.38■■■□□ 2.13
HMG20B-206ENST00000453933 ZNF280AP59817 542 aaPredicted RBP28.37■■■□□ 2.13
HMG20B-206ENST00000453933 TRIM28Q13263 835 aaKnown RBP28.37■■■□□ 2.13
HMG20B-206ENST00000453933 ANGEL2Q5VTE6 544 aaKnown RBP28.37■■■□□ 2.13
HMG20B-206ENST00000453933 RASAL3Q86YV0 1011 aa28.37■■■□□ 2.13
HMG20B-206ENST00000453933 G3V3G9 751 aa28.36■■■□□ 2.13
HMG20B-206ENST00000453933 UFL1O94874 794 aa28.36■■■□□ 2.13
HMG20B-206ENST00000453933 DCAF8Q5TAQ9 597 aa28.36■■■□□ 2.13
HMG20B-206ENST00000453933 CCDC146Q8IYE0 955 aa28.36■■■□□ 2.13
HMG20B-206ENST00000453933 RALBP1Q15311 655 aa28.35■■■□□ 2.13
HMG20B-206ENST00000453933 ANKIB1Q9P2G1 1089 aa28.35■■■□□ 2.13
HMG20B-206ENST00000453933 TRIM35Q9UPQ4 493 aa28.35■■■□□ 2.13
HMG20B-206ENST00000453933 HOXB7P09629 217 aa28.34■■■□□ 2.13
HMG20B-206ENST00000453933 RSBN1LQ6PCB5 846 aaPredicted RBP28.34■■■□□ 2.13
HMG20B-206ENST00000453933 REM2Q8IYK8 340 aaPredicted RBP28.34■■■□□ 2.13
HMG20B-206ENST00000453933 HYPKQ9NX55 129 aa28.34■■■□□ 2.13
HMG20B-206ENST00000453933 AGBL3Q8NEM8 1001 aa28.33■■■□□ 2.13
HMG20B-206ENST00000453933 GGA1Q9UJY5 639 aa28.33■■■□□ 2.13
HMG20B-206ENST00000453933 SCN9AQ15858 1988 aa28.32■■■□□ 2.12
HMG20B-206ENST00000453933 GMLQ99445 158 aa28.32■■■□□ 2.12
HMG20B-206ENST00000453933 FKBP1BP68106 108 aa28.31■■■□□ 2.12
HMG20B-206ENST00000453933 MOB2Q70IA6 237 aa28.31■■■□□ 2.12
HMG20B-206ENST00000453933 ZBTB38Q8NAP3 1195 aaPredicted RBP28.31■■■□□ 2.12
HMG20B-206ENST00000453933 SCAF8Q9UPN6 1271 aaKnown RBP28.31■■■□□ 2.12
HMG20B-206ENST00000453933 HPS5Q9UPZ3 1129 aa28.31■■■□□ 2.12
HMG20B-206ENST00000453933 PDE4DIPQ5VU43 2346 aa28.31■■■□□ 2.12
HMG20B-206ENST00000453933 DUSP27Q5VZP5 1158 aa28.3■■■□□ 2.12
HMG20B-206ENST00000453933 MYOZ2Q9NPC6 264 aa28.3■■■□□ 2.12
HMG20B-206ENST00000453933 USP17L8P0C7I0 530 aa28.29■■■□□ 2.12
HMG20B-206ENST00000453933 RIC3Q7Z5B4 369 aa28.29■■■□□ 2.12
HMG20B-206ENST00000453933 ZNF609O15014 1411 aa28.28■■■□□ 2.12
HMG20B-206ENST00000453933 AKAP11Q9UKA4 1901 aa28.28■■■□□ 2.12
HMG20B-206ENST00000453933 UBE2Q2LH0YL09 131 aa28.27■■■□□ 2.12
HMG20B-206ENST00000453933 TBC1D8O95759 1140 aa28.27■■■□□ 2.12
HMG20B-206ENST00000453933 PRPF38BQ5VTL8 546 aaKnown RBP28.27■■■□□ 2.12
HMG20B-206ENST00000453933 PRAMEF18Q5VWM3 479 aa28.27■■■□□ 2.12
HMG20B-206ENST00000453933 JARID2Q92833 1246 aaPredicted RBP28.27■■■□□ 2.12
HMG20B-206ENST00000453933 CCDC85AQ96PX6 553 aaPredicted RBP28.27■■■□□ 2.12
HMG20B-206ENST00000453933 PITPNM2Q9BZ72 1349 aa28.26■■■□□ 2.11
HMG20B-206ENST00000453933 CCDC152Q4G0S7 254 aa28.26■■■□□ 2.11
HMG20B-206ENST00000453933 ZNF296Q8WUU4 475 aaPredicted RBP28.26■■■□□ 2.11
HMG20B-206ENST00000453933 PHAXQ9H814 394 aaKnown RBP28.26■■■□□ 2.11
HMG20B-206ENST00000453933 HSP90B1P14625 803 aaKnown RBP28.25■■■□□ 2.11
HMG20B-206ENST00000453933 RUNDC1Q96C34 613 aa28.25■■■□□ 2.11
HMG20B-206ENST00000453933 MYD88Q99836 296 aa28.25■■■□□ 2.11
HMG20B-206ENST00000453933 HDAC9Q9UKV0 1011 aa28.25■■■□□ 2.11
HMG20B-206ENST00000453933 USP17L3A6NCW0 530 aa28.24■■■□□ 2.11
HMG20B-206ENST00000453933 USP17L4A6NCW7 530 aa28.24■■■□□ 2.11
HMG20B-206ENST00000453933 WTIPA6NIX2 430 aaPredicted RBP28.24■■■□□ 2.11
HMG20B-206ENST00000453933 PKN2Q16513 984 aaKnown RBP28.24■■■□□ 2.11
HMG20B-206ENST00000453933 USP17L1Q7RTZ2 530 aa28.24■■■□□ 2.11
HMG20B-206ENST00000453933 XDHP47989 1333 aa28.23■■■□□ 2.11
HMG20B-206ENST00000453933 PDE8AO60658 829 aa28.23■■■□□ 2.11
HMG20B-206ENST00000453933 GOLGA2Q08379 1002 aa28.23■■■□□ 2.11
HMG20B-206ENST00000453933 NBPF9Q3BBW0 867 aa28.23■■■□□ 2.11
HMG20B-206ENST00000453933 PODNQ7Z5L7 613 aa28.23■■■□□ 2.11
HMG20B-206ENST00000453933 PAPPA2Q9BXP8 1791 aa28.22■■■□□ 2.11
HMG20B-206ENST00000453933 PCCAP05165 728 aaPredicted RBP28.22■■■□□ 2.11
HMG20B-206ENST00000453933 MBIPQ9NS73 344 aa28.22■■■□□ 2.11
HMG20B-206ENST00000453933 MYBBP1AQ9BQG0 1328 aaKnown RBP28.21■■■□□ 2.11
HMG20B-206ENST00000453933 ATP2B4P23634 1241 aa28.21■■■□□ 2.11
HMG20B-206ENST00000453933 TM4SF4P48230 202 aa28.21■■■□□ 2.11
HMG20B-206ENST00000453933 ANKRD18AQ8IVF6 992 aa28.21■■■□□ 2.11
HMG20B-206ENST00000453933 CCDC191Q8NCU4 936 aa28.21■■■□□ 2.11
HMG20B-206ENST00000453933 WDR43Q15061 677 aaKnown RBP eCLIP28.2■■■□□ 2.1
HMG20B-206ENST00000453933 MXD3Q9BW11 206 aa28.2■■■□□ 2.1
HMG20B-206ENST00000453933 GPR25O00155 361 aa28.19■■■□□ 2.1
HMG20B-206ENST00000453933 DDX10Q13206 875 aaKnown RBP28.19■■■□□ 2.1
HMG20B-206ENST00000453933 TTLL12Q14166 644 aaPredicted RBP28.19■■■□□ 2.1
HMG20B-206ENST00000453933 CWC25Q9NXE8 425 aaPredicted RBP28.19■■■□□ 2.1
HMG20B-206ENST00000453933 ELL2O00472 640 aaPredicted RBP28.18■■■□□ 2.1
HMG20B-206ENST00000453933 MKRN3Q13064 507 aaKnown RBP28.18■■■□□ 2.1
HMG20B-206ENST00000453933 ADAMTS8Q9UP79 889 aa28.17■■■□□ 2.1
HMG20B-206ENST00000453933 ZNF853P0CG23 659 aa28.16■■■□□ 2.1
HMG20B-206ENST00000453933 DACT2Q5SW24 774 aa28.16■■■□□ 2.1
HMG20B-206ENST00000453933 WNT10BO00744 389 aa28.15■■■□□ 2.1
HMG20B-206ENST00000453933 NOM1Q5C9Z4 860 aaKnown RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms