RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TBC1D16Q8TBP0 767 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 CCDC85AQ96PX6 553 aaPredicted RBP15.11■□□□□ 0.01
GARNL3-210ENST00000453030 EYA3Q99504 573 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 SEC31BQ9NQW1 1179 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 KCNQ5Q9NR82 932 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 AKAP11Q9UKA4 1901 aa15.1■□□□□ 0.01
GARNL3-210ENST00000453030 UFL1O94874 794 aa15.1■□□□□ 0.01
GARNL3-210ENST00000453030 RPS8P62241 208 aaKnown RBP15.1■□□□□ 0.01
GARNL3-210ENST00000453030 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
GARNL3-210ENST00000453030 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
GARNL3-210ENST00000453030 DPF2Q92785 391 aa15.1■□□□□ 0.01
GARNL3-210ENST00000453030 JARID2Q92833 1246 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-210ENST00000453030 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
GARNL3-210ENST00000453030 ZNF646O15015 1829 aaPredicted RBP15.09■□□□□ 0.01
GARNL3-210ENST00000453030 MAP2K2P36507 400 aa15.09■□□□□ 0.01
GARNL3-210ENST00000453030 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
GARNL3-210ENST00000453030 KRT26Q7Z3Y9 468 aa15.09■□□□□ 0.01
GARNL3-210ENST00000453030 C8orf58Q8NAV2 365 aa15.09■□□□□ 0.01
GARNL3-210ENST00000453030 ANKIB1Q9P2G1 1089 aa15.09■□□□□ 0.01
GARNL3-210ENST00000453030 ADM5C9JUS6 153 aa15.08■□□□□ 0
GARNL3-210ENST00000453030 G3V3G9 751 aa15.08■□□□□ 0
GARNL3-210ENST00000453030 RPS12P25398 132 aaKnown RBP15.08■□□□□ 0
GARNL3-210ENST00000453030 HUNKP57058 714 aa15.08■□□□□ 0
GARNL3-210ENST00000453030 CCDC152Q4G0S7 254 aa15.08■□□□□ 0
GARNL3-210ENST00000453030 DCAF8Q5TAQ9 597 aa15.08■□□□□ 0
GARNL3-210ENST00000453030 CCDC191Q8NCU4 936 aa15.08■□□□□ 0
GARNL3-210ENST00000453030 HHIPL1Q96JK4 782 aa15.08■□□□□ 0
GARNL3-210ENST00000453030 ZC3H12CQ9C0D7 883 aaKnown RBP15.08■□□□□ 0
GARNL3-210ENST00000453030 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
GARNL3-210ENST00000453030 PCCAP05165 728 aaPredicted RBP15.07■□□□□ 0
GARNL3-210ENST00000453030 HSP90B1P14625 803 aaKnown RBP15.07■□□□□ 0
GARNL3-210ENST00000453030 KIF4BQ2VIQ3 1234 aa15.07■□□□□ 0
GARNL3-210ENST00000453030 GGA3Q9NZ52 723 aa15.07■□□□□ 0
GARNL3-210ENST00000453030 GGA1Q9UJY5 639 aa15.07■□□□□ 0
GARNL3-210ENST00000453030 CACNA1FO60840 1977 aa15.07■□□□□ 0
GARNL3-210ENST00000453030 PDE8AO60658 829 aa15.06■□□□□ 0
GARNL3-210ENST00000453030 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
GARNL3-210ENST00000453030 BRPF1P55201 1214 aaPredicted RBP15.06■□□□□ 0
GARNL3-210ENST00000453030 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
GARNL3-210ENST00000453030 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
GARNL3-210ENST00000453030 METTL22Q9BUU2 404 aaPredicted RBP15.06■□□□□ 0
GARNL3-210ENST00000453030 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
GARNL3-210ENST00000453030 ANKRD18AQ8IVF6 992 aa15.05■□□□□ -0
GARNL3-210ENST00000453030 TSPYL6Q8N831 410 aa15.05■□□□□ -0
GARNL3-210ENST00000453030 DCPSQ96C86 337 aaKnown RBP15.05■□□□□ -0
GARNL3-210ENST00000453030 ZIC5Q96T25 663 aa15.05■□□□□ -0
GARNL3-210ENST00000453030 GBA2Q9HCG7 927 aaPredicted RBP15.05■□□□□ -0
GARNL3-210ENST00000453030 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
GARNL3-210ENST00000453030 ASTN2O75129 1339 aaPredicted RBP15.05■□□□□ -0
GARNL3-210ENST00000453030 XDHP47989 1333 aa15.04■□□□□ -0
GARNL3-210ENST00000453030 CA12O43570 354 aa15.04■□□□□ -0
GARNL3-210ENST00000453030 VIL1P09327 827 aaKnown RBP15.04■□□□□ -0
GARNL3-210ENST00000453030 CTSWP56202 376 aa15.04■□□□□ -0
GARNL3-210ENST00000453030 NOGQ13253 232 aa15.04■□□□□ -0
GARNL3-210ENST00000453030 A0A1B0GUL6 1792 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 ZNF609O15014 1411 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 PI4KAP2A4QPH2 592 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 CCDC85CA6NKD9 419 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 SULF1Q8IWU6 871 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 PI4KAP1Q8N8J0 262 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 C2orf69Q8N8R5 385 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
GARNL3-210ENST00000453030 IGKV5-2P06315 115 aa15.02■□□□□ -0
GARNL3-210ENST00000453030 FAM161AQ3B820 660 aa15.02■□□□□ -0
GARNL3-210ENST00000453030 RGMBQ6NW40 437 aa15.02■□□□□ -0
GARNL3-210ENST00000453030 RSBN1LQ6PCB5 846 aaPredicted RBP15.02■□□□□ -0
GARNL3-210ENST00000453030 STK31Q9BXU1 1019 aa15.02■□□□□ -0
GARNL3-210ENST00000453030 CWF19L2Q2TBE0 894 aaKnown RBP15.01□□□□□ -0.01
GARNL3-210ENST00000453030 CCDC184Q52MB2 194 aa15.01□□□□□ -0.01
GARNL3-210ENST00000453030 ANGEL2Q5VTE6 544 aaKnown RBP15.01□□□□□ -0.01
GARNL3-210ENST00000453030 KSR2Q6VAB6 950 aa15.01□□□□□ -0.01
GARNL3-210ENST00000453030 CDCA5Q96FF9 252 aa15.01□□□□□ -0.01
GARNL3-210ENST00000453030 CDC5LQ99459 802 aaKnown RBP15.01□□□□□ -0.01
GARNL3-210ENST00000453030 CHMP4AQ9BY43 222 aa15.01□□□□□ -0.01
GARNL3-210ENST00000453030 MCOLN1Q9GZU1 580 aa15.01□□□□□ -0.01
GARNL3-210ENST00000453030 GREM2Q9H772 168 aa15.01□□□□□ -0.01
GARNL3-210ENST00000453030 WTIPA6NIX2 430 aaPredicted RBP15□□□□□ -0.01
GARNL3-210ENST00000453030 FAM155AB1AL88 458 aaPredicted RBP15□□□□□ -0.01
GARNL3-210ENST00000453030 ATP2B4P23634 1241 aa15□□□□□ -0.01
GARNL3-210ENST00000453030 ZNF157P51786 506 aaPredicted RBP15□□□□□ -0.01
GARNL3-210ENST00000453030 ZNF280AP59817 542 aaPredicted RBP15□□□□□ -0.01
GARNL3-210ENST00000453030 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
GARNL3-210ENST00000453030 AGBL3Q8NEM8 1001 aa15□□□□□ -0.01
GARNL3-210ENST00000453030 MED23Q9ULK4 1368 aa14.99□□□□□ -0.01
GARNL3-210ENST00000453030 SCARF1Q14162 830 aa14.99□□□□□ -0.01
GARNL3-210ENST00000453030 TWISTNBQ3B726 338 aaPredicted RBP14.99□□□□□ -0.01
GARNL3-210ENST00000453030 G2E3Q7L622 706 aa14.99□□□□□ -0.01
GARNL3-210ENST00000453030 UBE3BQ7Z3V4 1068 aa14.99□□□□□ -0.01
GARNL3-210ENST00000453030 TTLL11Q8NHH1 800 aa14.99□□□□□ -0.01
GARNL3-210ENST00000453030 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
GARNL3-210ENST00000453030 MYOZ2Q9NPC6 264 aa14.99□□□□□ -0.01
GARNL3-210ENST00000453030 SCAF8Q9UPN6 1271 aaKnown RBP14.99□□□□□ -0.01
GARNL3-210ENST00000453030 USP17L3A6NCW0 530 aa14.98□□□□□ -0.01
GARNL3-210ENST00000453030 USP17L4A6NCW7 530 aa14.98□□□□□ -0.01
GARNL3-210ENST00000453030 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
GARNL3-210ENST00000453030 USP17L8P0C7I0 530 aa14.98□□□□□ -0.01
GARNL3-210ENST00000453030 KIF23Q02241 960 aaPredicted RBP14.98□□□□□ -0.01
GARNL3-210ENST00000453030 DGKZQ13574 1117 aa14.98□□□□□ -0.01
GARNL3-210ENST00000453030 USP17L1Q7RTZ2 530 aa14.98□□□□□ -0.01
GARNL3-210ENST00000453030 ECM29Q5VYK3 1845 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms