RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 ECE1P42892 770 aa23.6■■□□□ 1.37
PDLIM2-214ENST00000452226 GPR101Q96P66 508 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-214ENST00000452226 ZBTB12Q9Y330 459 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-214ENST00000452226 SHTN1A0MZ66 631 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 H7C1D1 291 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 ECE2O60344 883 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 IGKV5-2P06315 115 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 HIRAP54198 1017 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 DOK7Q18PE1 504 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 CST9Q5W186 159 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 PAXIP1Q6ZW49 1069 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 TRPM4Q8TD43 1214 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 BEGAINQ9BUH8 593 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 PODXL2Q9NZ53 605 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 ANKIB1Q9P2G1 1089 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 PGAP2Q9UHJ9 254 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 MYH3P11055 1940 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 ZNF521Q96K83 1311 aa23.59■■□□□ 1.37
PDLIM2-214ENST00000452226 NEXNQ0ZGT2 675 aa23.58■■□□□ 1.37
PDLIM2-214ENST00000452226 G2E3Q7L622 706 aa23.58■■□□□ 1.37
PDLIM2-214ENST00000452226 MICALL2Q8IY33 904 aa23.58■■□□□ 1.37
PDLIM2-214ENST00000452226 ZC3H15Q8WU90 426 aaKnown RBP23.58■■□□□ 1.37
PDLIM2-214ENST00000452226 DPF2Q92785 391 aa23.58■■□□□ 1.37
PDLIM2-214ENST00000452226 ZC3H12CQ9C0D7 883 aaKnown RBP23.58■■□□□ 1.37
PDLIM2-214ENST00000452226 CACNA1FO60840 1977 aa23.58■■□□□ 1.36
PDLIM2-214ENST00000452226 UFL1O94874 794 aa23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 SLC4A2P04920 1241 aa23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 LBX1P52954 281 aa23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 GLIS2Q9BZE0 524 aaPredicted RBP23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 KCNQ5Q9NR82 932 aa23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 GGA1Q9UJY5 639 aa23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 FANCIQ9NVI1 1328 aa23.57■■□□□ 1.36
PDLIM2-214ENST00000452226 SCN9AQ15858 1988 aa23.56■■□□□ 1.36
PDLIM2-214ENST00000452226 ANKRD18AQ8IVF6 992 aa23.56■■□□□ 1.36
PDLIM2-214ENST00000452226 POLR2AP24928 1970 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-214ENST00000452226 CTSWP56202 376 aa23.55■■□□□ 1.36
PDLIM2-214ENST00000452226 CWF19L2Q2TBE0 894 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-214ENST00000452226 RTL9Q8NET4 1388 aa23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 NEURL1BA8MQ27 555 aa23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 G3V3G9 751 aa23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 CELF2O95319 508 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 RPS12P25398 132 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 DCAF8Q5TAQ9 597 aa23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 CAPNS2Q96L46 248 aa23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 TLL2Q9Y6L7 1015 aa23.54■■□□□ 1.36
PDLIM2-214ENST00000452226 CDC37L1Q7L3B6 337 aa23.53■■□□□ 1.36
PDLIM2-214ENST00000452226 SAMD7Q7Z3H4 446 aa23.53■■□□□ 1.36
PDLIM2-214ENST00000452226 MIER1Q8N108 512 aa23.53■■□□□ 1.36
PDLIM2-214ENST00000452226 CDC5LQ99459 802 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-214ENST00000452226 SPEF2Q9C093 1822 aa23.53■■□□□ 1.36
PDLIM2-214ENST00000452226 FLIIQ13045 1269 aa23.52■■□□□ 1.36
PDLIM2-214ENST00000452226 GRM1Q13255 1194 aa23.52■■□□□ 1.36
PDLIM2-214ENST00000452226 TBC1D10BQ4KMP7 808 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-214ENST00000452226 CYP4F22Q6NT55 531 aa23.52■■□□□ 1.36
PDLIM2-214ENST00000452226 TTLL11Q8NHH1 800 aa23.52■■□□□ 1.36
PDLIM2-214ENST00000452226 XDHP47989 1333 aa23.52■■□□□ 1.36
PDLIM2-214ENST00000452226 VIL1P09327 827 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-214ENST00000452226 UBE3BQ7Z3V4 1068 aa23.51■■□□□ 1.35
PDLIM2-214ENST00000452226 GREM2Q9H772 168 aa23.51■■□□□ 1.35
PDLIM2-214ENST00000452226 ZNF408Q9H9D4 720 aa23.51■■□□□ 1.35
PDLIM2-214ENST00000452226 H7C1W4 665 aa23.5■■□□□ 1.35
PDLIM2-214ENST00000452226 EGFRP00533 1210 aa23.5■■□□□ 1.35
PDLIM2-214ENST00000452226 HSPA8P11142 646 aaKnown RBP23.5■■□□□ 1.35
PDLIM2-214ENST00000452226 FKBP5Q13451 457 aaPredicted RBP23.5■■□□□ 1.35
PDLIM2-214ENST00000452226 RBM26Q5T8P6 1007 aaKnown RBP23.5■■□□□ 1.35
PDLIM2-214ENST00000452226 SAPCD2Q86UD0 394 aa23.5■■□□□ 1.35
PDLIM2-214ENST00000452226 USP48Q86UV5 1035 aa23.5■■□□□ 1.35
PDLIM2-214ENST00000452226 ATP2B4P23634 1241 aa23.49■■□□□ 1.35
PDLIM2-214ENST00000452226 EXOSC9Q06265 439 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-214ENST00000452226 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
PDLIM2-214ENST00000452226 PSME4Q14997 1843 aa23.49■■□□□ 1.35
PDLIM2-214ENST00000452226 THSD7BQ9C0I4 1608 aa23.48■■□□□ 1.35
PDLIM2-214ENST00000452226 VAMP4O75379 141 aa23.48■■□□□ 1.35
PDLIM2-214ENST00000452226 MAP2K2P36507 400 aa23.48■■□□□ 1.35
PDLIM2-214ENST00000452226 GCKRQ14397 625 aa23.48■■□□□ 1.35
PDLIM2-214ENST00000452226 DNAAF4Q8WXU2 420 aa23.48■■□□□ 1.35
PDLIM2-214ENST00000452226 BSDC1Q9NW68 430 aaPredicted RBP23.48■■□□□ 1.35
PDLIM2-214ENST00000452226 MINPP1Q9UNW1 487 aa23.47■■□□□ 1.35
PDLIM2-214ENST00000452226 KIF4BQ2VIQ3 1234 aa23.46■■□□□ 1.35
PDLIM2-214ENST00000452226 DLK2Q6UY11 383 aa23.46■■□□□ 1.35
PDLIM2-214ENST00000452226 KRT26Q7Z3Y9 468 aa23.46■■□□□ 1.35
PDLIM2-214ENST00000452226 WTIPA6NIX2 430 aaPredicted RBP23.45■■□□□ 1.34
PDLIM2-214ENST00000452226 RSBN1LQ6PCB5 846 aaPredicted RBP23.45■■□□□ 1.34
PDLIM2-214ENST00000452226 LINS1Q8NG48 757 aa23.45■■□□□ 1.34
PDLIM2-214ENST00000452226 DCPSQ96C86 337 aaKnown RBP23.45■■□□□ 1.34
PDLIM2-214ENST00000452226 HHIPL1Q96JK4 782 aa23.45■■□□□ 1.34
PDLIM2-214ENST00000452226 PLA2G12BQ9BX93 195 aa23.45■■□□□ 1.34
PDLIM2-214ENST00000452226 CA12O43570 354 aa23.44■■□□□ 1.34
PDLIM2-214ENST00000452226 AOC2O75106 756 aa23.44■■□□□ 1.34
PDLIM2-214ENST00000452226 AGBL3Q8NEM8 1001 aa23.44■■□□□ 1.34
PDLIM2-214ENST00000452226 IGHMBP2P38935 993 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-214ENST00000452226 CASP7P55210 303 aa23.43■■□□□ 1.34
PDLIM2-214ENST00000452226 PODNQ7Z5L7 613 aa23.43■■□□□ 1.34
PDLIM2-214ENST00000452226 ZNF609O15014 1411 aa23.42■■□□□ 1.34
PDLIM2-214ENST00000452226 MED23Q9ULK4 1368 aa23.42■■□□□ 1.34
PDLIM2-214ENST00000452226 USP17L3A6NCW0 530 aa23.42■■□□□ 1.34
PDLIM2-214ENST00000452226 USP17L4A6NCW7 530 aa23.42■■□□□ 1.34
PDLIM2-214ENST00000452226 ITGA6P23229 1130 aa23.42■■□□□ 1.34
PDLIM2-214ENST00000452226 CCT4P50991 539 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms