RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SIL1Q9H173 461 aa29.96■■■□□ 2.39
CPSF4-207ENST00000451876 MINPP1Q9UNW1 487 aa29.96■■■□□ 2.39
CPSF4-207ENST00000451876 CCDC88AQ3V6T2 1871 aa29.96■■■□□ 2.39
CPSF4-207ENST00000451876 SOGA3Q5TF21 947 aa29.96■■■□□ 2.39
CPSF4-207ENST00000451876 RPAP2Q8IXW5 612 aaPredicted RBP29.96■■■□□ 2.39
CPSF4-207ENST00000451876 COPRSQ9NQ92 184 aa29.96■■■□□ 2.39
CPSF4-207ENST00000451876 CNNM1Q9NRU3 951 aa29.96■■■□□ 2.39
CPSF4-207ENST00000451876 PCDHB15Q9Y5E8 787 aa29.96■■■□□ 2.39
CPSF4-207ENST00000451876 SBF1O95248 1867 aa29.94■■■□□ 2.38
CPSF4-207ENST00000451876 NFKBIEO00221 500 aa29.94■■■□□ 2.38
CPSF4-207ENST00000451876 GPSM2P81274 684 aa29.94■■■□□ 2.38
CPSF4-207ENST00000451876 CC2D2BQ6DHV5 1058 aa29.94■■■□□ 2.38
CPSF4-207ENST00000451876 CHRNDQ07001 517 aa29.93■■■□□ 2.38
CPSF4-207ENST00000451876 ARHGAP27Q6ZUM4 889 aa29.93■■■□□ 2.38
CPSF4-207ENST00000451876 TMX4Q9H1E5 349 aaPredicted RBP29.93■■■□□ 2.38
CPSF4-207ENST00000451876 NSFL1CQ9UNZ2 370 aaKnown RBP29.93■■■□□ 2.38
CPSF4-207ENST00000451876 RIPOR2Q9Y4F9 1068 aa29.93■■■□□ 2.38
CPSF4-207ENST00000451876 EYA2O00167 538 aa29.92■■■□□ 2.38
CPSF4-207ENST00000451876 RASSF7Q02833 373 aa29.92■■■□□ 2.38
CPSF4-207ENST00000451876 ATG9AQ7Z3C6 839 aa29.92■■■□□ 2.38
CPSF4-207ENST00000451876 RTKN2Q8IZC4 609 aa29.92■■■□□ 2.38
CPSF4-207ENST00000451876 GRIN3BO60391 1043 aa29.91■■■□□ 2.38
CPSF4-207ENST00000451876 MPNDQ8N594 471 aa29.91■■■□□ 2.38
CPSF4-207ENST00000451876 HELBQ8NG08 1087 aaPredicted RBP29.91■■■□□ 2.38
CPSF4-207ENST00000451876 DPP8Q6V1X1 898 aaPredicted RBP29.9■■■□□ 2.38
CPSF4-207ENST00000451876 ANKIB1Q9P2G1 1089 aa29.9■■■□□ 2.38
CPSF4-207ENST00000451876 WTIPA6NIX2 430 aaPredicted RBP29.89■■■□□ 2.38
CPSF4-207ENST00000451876 TAF5LO75529 589 aa29.89■■■□□ 2.38
CPSF4-207ENST00000451876 TAOK3Q9H2K8 898 aa29.89■■■□□ 2.38
CPSF4-207ENST00000451876 PODXL2Q9NZ53 605 aa29.89■■■□□ 2.38
CPSF4-207ENST00000451876 XDHP47989 1333 aa29.89■■■□□ 2.38
CPSF4-207ENST00000451876 AAMPQ13685 434 aa29.89■■■□□ 2.37
CPSF4-207ENST00000451876 CIAO1O76071 339 aa29.88■■■□□ 2.37
CPSF4-207ENST00000451876 PRELPP51888 382 aa29.88■■■□□ 2.37
CPSF4-207ENST00000451876 FKBP4Q02790 459 aaKnown RBP eCLIP29.88■■■□□ 2.37
CPSF4-207ENST00000451876 PSMD1Q99460 953 aa29.88■■■□□ 2.37
CPSF4-207ENST00000451876 POLLQ9UGP5 575 aa29.88■■■□□ 2.37
CPSF4-207ENST00000451876 FBXO3Q9UK99 471 aa29.88■■■□□ 2.37
CPSF4-207ENST00000451876 HMMRO75330 724 aa29.87■■■□□ 2.37
CPSF4-207ENST00000451876 GRIPAP1Q4V328 841 aa29.87■■■□□ 2.37
CPSF4-207ENST00000451876 MROH5Q6ZUA9 1318 aa29.87■■■□□ 2.37
CPSF4-207ENST00000451876 LTBP3Q9NS15 1303 aa29.87■■■□□ 2.37
CPSF4-207ENST00000451876 SNAP23O00161 211 aa29.86■■■□□ 2.37
CPSF4-207ENST00000451876 VGLL2Q8N8G2 317 aa29.86■■■□□ 2.37
CPSF4-207ENST00000451876 TBC1D16Q8TBP0 767 aa29.86■■■□□ 2.37
CPSF4-207ENST00000451876 RTFDC1Q9BY42 306 aaPredicted RBP29.86■■■□□ 2.37
CPSF4-207ENST00000451876 ANKRD2Q9GZV1 360 aa29.86■■■□□ 2.37
CPSF4-207ENST00000451876 DICER1Q9UPY3 1922 aaKnown RBP29.86■■■□□ 2.37
CPSF4-207ENST00000451876 DCAF8L1A6NGE4 600 aa29.85■■■□□ 2.37
CPSF4-207ENST00000451876 SURF6O75683 361 aaKnown RBP29.85■■■□□ 2.37
CPSF4-207ENST00000451876 METTL24Q5JXM2 366 aa29.85■■■□□ 2.37
CPSF4-207ENST00000451876 GPR101Q96P66 508 aaPredicted RBP29.85■■■□□ 2.37
CPSF4-207ENST00000451876 UFL1O94874 794 aa29.85■■■□□ 2.37
CPSF4-207ENST00000451876 IL15P40933 162 aaPredicted RBP29.85■■■□□ 2.37
CPSF4-207ENST00000451876 ZNF277Q9NRM2 450 aaPredicted RBP29.85■■■□□ 2.37
CPSF4-207ENST00000451876 EXOC6BQ9Y2D4 811 aa29.85■■■□□ 2.37
CPSF4-207ENST00000451876 NOP58Q9Y2X3 529 aaKnown RBP29.85■■■□□ 2.37
CPSF4-207ENST00000451876 GGA1Q9UJY5 639 aa29.84■■■□□ 2.37
CPSF4-207ENST00000451876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.84■■■□□ 2.37
CPSF4-207ENST00000451876 COL4A5P29400 1685 aa29.84■■■□□ 2.37
CPSF4-207ENST00000451876 C6orf229H3BNL8 230 aa29.83■■■□□ 2.37
CPSF4-207ENST00000451876 TIAM2Q8IVF5 1701 aa29.83■■■□□ 2.37
CPSF4-207ENST00000451876 CHD4Q14839 1912 aa29.82■■■□□ 2.36
CPSF4-207ENST00000451876 SASH1O94885 1247 aa29.82■■■□□ 2.36
CPSF4-207ENST00000451876 PDE8BO95263 885 aa29.82■■■□□ 2.36
CPSF4-207ENST00000451876 ATP2B4P23634 1241 aa29.82■■■□□ 2.36
CPSF4-207ENST00000451876 G3BP1Q13283 466 aaKnown RBP eCLIP29.82■■■□□ 2.36
CPSF4-207ENST00000451876 ZNF804BA4D1E1 1349 aa29.81■■■□□ 2.36
CPSF4-207ENST00000451876 KLRK1P26718 216 aa29.8■■■□□ 2.36
CPSF4-207ENST00000451876 LEMD3Q9Y2U8 911 aa29.8■■■□□ 2.36
CPSF4-207ENST00000451876 ARAP2Q8WZ64 1704 aa29.8■■■□□ 2.36
CPSF4-207ENST00000451876 NEFLP07196 543 aa29.79■■■□□ 2.36
CPSF4-207ENST00000451876 TFCP2Q12800 502 aa29.79■■■□□ 2.36
CPSF4-207ENST00000451876 OS9Q13438 667 aaPredicted RBP29.79■■■□□ 2.36
CPSF4-207ENST00000451876 AOC3Q16853 763 aa29.79■■■□□ 2.36
CPSF4-207ENST00000451876 SUPT20HQ8NEM7 779 aa29.79■■■□□ 2.36
CPSF4-207ENST00000451876 IARSP41252 1262 aaKnown RBP29.78■■■□□ 2.36
CPSF4-207ENST00000451876 KCNJ4P48050 445 aa29.78■■■□□ 2.36
CPSF4-207ENST00000451876 CEP126Q9P2H0 1117 aa29.78■■■□□ 2.36
CPSF4-207ENST00000451876 LMNB1P20700 586 aa29.78■■■□□ 2.36
CPSF4-207ENST00000451876 TXNRD3Q86VQ6 643 aa29.78■■■□□ 2.36
CPSF4-207ENST00000451876 IRS2Q9Y4H2 1338 aa29.77■■■□□ 2.36
CPSF4-207ENST00000451876 RIMBP2O15034 1052 aa29.77■■■□□ 2.36
CPSF4-207ENST00000451876 PPIP5K2O43314 1243 aa29.77■■■□□ 2.36
CPSF4-207ENST00000451876 WASHC4Q2M389 1173 aa29.77■■■□□ 2.36
CPSF4-207ENST00000451876 MED23Q9ULK4 1368 aa29.76■■■□□ 2.36
CPSF4-207ENST00000451876 KIAA2012Q0VF49 1180 aa29.76■■■□□ 2.35
CPSF4-207ENST00000451876 HDAC1Q13547 482 aaPredicted RBP29.76■■■□□ 2.35
CPSF4-207ENST00000451876 APBB1O00213 710 aa29.75■■■□□ 2.35
CPSF4-207ENST00000451876 FGFR2P21802 821 aa29.75■■■□□ 2.35
CPSF4-207ENST00000451876 UBE4AQ14139 1066 aa29.75■■■□□ 2.35
CPSF4-207ENST00000451876 PUM3Q15397 648 aaKnown RBP29.75■■■□□ 2.35
CPSF4-207ENST00000451876 DCTPP1Q9H773 170 aa29.75■■■□□ 2.35
CPSF4-207ENST00000451876 EYA3Q99504 573 aa29.74■■■□□ 2.35
CPSF4-207ENST00000451876 RNF181Q9P0P0 153 aa29.74■■■□□ 2.35
CPSF4-207ENST00000451876 ZNF609O15014 1411 aa29.74■■■□□ 2.35
CPSF4-207ENST00000451876 C9orf131Q5VYM1 1079 aa29.74■■■□□ 2.35
CPSF4-207ENST00000451876 LARGE2Q8N3Y3 721 aa29.74■■■□□ 2.35
CPSF4-207ENST00000451876 IGHDP01880 384 aa29.73■■■□□ 2.35
CPSF4-207ENST00000451876 HSP90AB4PQ58FF6 505 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms