RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 MAP4K1Q92918 833 aa8.07□□□□□ -1.12
USP46-202ENST00000451218 TEX13AQ9BXU3 409 aaPredicted RBP8.07□□□□□ -1.12
USP46-202ENST00000451218 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
USP46-202ENST00000451218 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
USP46-202ENST00000451218 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
USP46-202ENST00000451218 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
USP46-202ENST00000451218 ZGPATQ8N5A5 531 aaKnown RBP8.07□□□□□ -1.12
USP46-202ENST00000451218 PSME4Q14997 1843 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 K7ELQ4 463 aaPredicted RBP8.06□□□□□ -1.12
USP46-202ENST00000451218 GLRX3O76003 335 aaKnown RBP8.06□□□□□ -1.12
USP46-202ENST00000451218 NBPF3Q9H094 633 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 BAZ2AQ9UIF9 1905 aaKnown RBP8.06□□□□□ -1.12
USP46-202ENST00000451218 SIPA1L1O43166 1804 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 CTSWP56202 376 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 CCDC87Q9NVE4 849 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 TACC3Q9Y6A5 838 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 EYA2O00167 538 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 TM4SF1P30408 202 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 NMIQ13287 307 aaPredicted RBP8.06□□□□□ -1.12
USP46-202ENST00000451218 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 FAM182BQ5T319 152 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 ERC1Q8IUD2 1116 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 SPOCK2Q92563 424 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 BRCA1P38398 1863 aaKnown RBP8.06□□□□□ -1.12
USP46-202ENST00000451218 ANAPC15P60006 121 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 PROM2Q8N271 834 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.06□□□□□ -1.12
USP46-202ENST00000451218 C8orf37Q96NL8 207 aa8.06□□□□□ -1.12
USP46-202ENST00000451218 SEC62Q99442 399 aaKnown RBP8.06□□□□□ -1.12
USP46-202ENST00000451218 SH3TC1Q8TE82 1336 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 HSP90AB4PQ58FF6 505 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 RUFY3Q7L099 469 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 TCRBV5S4A2TA0A5A2 114 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 TAF5LO75529 589 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 NEXNQ0ZGT2 675 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
USP46-202ENST00000451218 STOX1Q6ZVD7 989 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 GJD4Q96KN9 370 aaPredicted RBP8.05□□□□□ -1.12
USP46-202ENST00000451218 SNED1Q8TER0 1413 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 RGL2O15211 777 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 TIMM10P62072 90 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 EVI5LQ96CN4 794 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 TBC1D2BQ9UPU7 963 aa8.05□□□□□ -1.12
USP46-202ENST00000451218 RABEP1Q15276 862 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 ZNF512BQ96KM6 892 aaPredicted RBP8.04□□□□□ -1.12
USP46-202ENST00000451218 BCL11AQ9H165 835 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 CCDC171Q6TFL3 1326 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 DZIP3Q86Y13 1208 aaKnown RBP8.04□□□□□ -1.12
USP46-202ENST00000451218 ZNF384Q8TF68 577 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 CHAMP1Q96JM3 812 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 AFF2P51816 1311 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 VPS53Q5VIR6 699 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 PI16Q6UXB8 463 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 SLKQ9H2G2 1235 aaPredicted RBP8.04□□□□□ -1.12
USP46-202ENST00000451218 STARD3NLO95772 234 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 CPA1P15085 419 aa8.04□□□□□ -1.12
USP46-202ENST00000451218 CLASRPQ8N2M8 674 aaKnown RBP8.04□□□□□ -1.12
USP46-202ENST00000451218 MCAMP43121 646 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 RILPL2Q969X0 211 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 BOLA2Q9H3K6 86 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 ZSWIM6Q9HCJ5 1215 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 USP21Q9UK80 565 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 GREB1LQ9C091 1923 aaPredicted RBP8.03□□□□□ -1.12
USP46-202ENST00000451218 A0A1B0GUL7 405 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 ATP6V1AP38606 617 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 TOB2Q14106 344 aaPredicted RBP8.03□□□□□ -1.12
USP46-202ENST00000451218 CWC27Q6UX04 472 aaKnown RBP8.03□□□□□ -1.12
USP46-202ENST00000451218 M0R2C6 588 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 GPTP24298 496 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 ARID4AP29374 1257 aaPredicted RBP8.03□□□□□ -1.12
USP46-202ENST00000451218 TNPO1Q92973 898 aaKnown RBP8.03□□□□□ -1.12
USP46-202ENST00000451218 RGS17Q9UGC6 210 aaPredicted RBP8.03□□□□□ -1.12
USP46-202ENST00000451218 ZNF804BA4D1E1 1349 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 NAV1Q8NEY1 1877 aa8.03□□□□□ -1.12
USP46-202ENST00000451218 SNAP23O00161 211 aa8.02□□□□□ -1.12
USP46-202ENST00000451218 ITGA6P23229 1130 aa8.02□□□□□ -1.12
USP46-202ENST00000451218 IL15P40933 162 aaPredicted RBP8.02□□□□□ -1.12
USP46-202ENST00000451218 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.12
USP46-202ENST00000451218 TBC1D9BQ66K14 1250 aa8.02□□□□□ -1.12
USP46-202ENST00000451218 CCDC129Q6ZRS4 1044 aa8.02□□□□□ -1.12
USP46-202ENST00000451218 ALDH8A1Q9H2A2 487 aaPredicted RBP8.02□□□□□ -1.12
USP46-202ENST00000451218 SEC31BQ9NQW1 1179 aa8.02□□□□□ -1.12
USP46-202ENST00000451218 CARMIL3Q8ND23 1372 aa8.02□□□□□ -1.12
USP46-202ENST00000451218 TMX3Q96JJ7 454 aa8.02□□□□□ -1.13
USP46-202ENST00000451218 CNTROBQ8N137 903 aa8.02□□□□□ -1.13
USP46-202ENST00000451218 AK7Q96M32 723 aa8.02□□□□□ -1.13
USP46-202ENST00000451218 AGXT2Q9BYV1 514 aa8.02□□□□□ -1.13
USP46-202ENST00000451218 MAST3O60307 1309 aa8.02□□□□□ -1.13
USP46-202ENST00000451218 SLC27A2O14975 620 aa8.02□□□□□ -1.13
USP46-202ENST00000451218 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.13
USP46-202ENST00000451218 REC8O95072 547 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 SCN9AQ15858 1988 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 SLC10A5Q5PT55 438 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 IFNLR1Q8IU57 520 aaPredicted RBP8.01□□□□□ -1.13
USP46-202ENST00000451218 KBTBD3Q8NAB2 608 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 IRS4O14654 1257 aaPredicted RBP8.01□□□□□ -1.13
USP46-202ENST00000451218 OSBP2Q969R2 916 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 PDE8AO60658 829 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 G3BP1Q13283 466 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP46-202ENST00000451218 XAGE2Q96GT9 111 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms