RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 CAPNS2Q96L46 248 aa12.77□□□□□ -0.37
LINC01238-204ENST00000451070 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
LINC01238-204ENST00000451070 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
LINC01238-204ENST00000451070 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.37
LINC01238-204ENST00000451070 MYH3P11055 1940 aa12.77□□□□□ -0.37
LINC01238-204ENST00000451070 ECE2O60344 883 aa12.76□□□□□ -0.37
LINC01238-204ENST00000451070 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
LINC01238-204ENST00000451070 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
LINC01238-204ENST00000451070 LBX1P52954 281 aa12.76□□□□□ -0.37
LINC01238-204ENST00000451070 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
LINC01238-204ENST00000451070 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
LINC01238-204ENST00000451070 PSME4Q14997 1843 aa12.76□□□□□ -0.37
LINC01238-204ENST00000451070 H7C1D1 291 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 PDE8AO60658 829 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
LINC01238-204ENST00000451070 EGFRP00533 1210 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 HSPA8P11142 646 aaKnown RBP12.75□□□□□ -0.37
LINC01238-204ENST00000451070 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
LINC01238-204ENST00000451070 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
LINC01238-204ENST00000451070 CCDC27Q2M243 656 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 CCDC152Q4G0S7 254 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
LINC01238-204ENST00000451070 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 SAPCD2Q86UD0 394 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 WWC1Q8IX03 1113 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
LINC01238-204ENST00000451070 EYA3Q99504 573 aa12.75□□□□□ -0.37
LINC01238-204ENST00000451070 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 UFL1O94874 794 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 ECE1P42892 770 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 KSR2Q6VAB6 950 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
LINC01238-204ENST00000451070 AOC2O75106 756 aa12.73□□□□□ -0.37
LINC01238-204ENST00000451070 VIL1P09327 827 aaKnown RBP12.73□□□□□ -0.37
LINC01238-204ENST00000451070 RPS12P25398 132 aaKnown RBP12.73□□□□□ -0.37
LINC01238-204ENST00000451070 GRM1Q13255 1194 aa12.73□□□□□ -0.37
LINC01238-204ENST00000451070 TBC1D10BQ4KMP7 808 aaPredicted RBP12.73□□□□□ -0.37
LINC01238-204ENST00000451070 G2E3Q7L622 706 aa12.73□□□□□ -0.37
LINC01238-204ENST00000451070 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
LINC01238-204ENST00000451070 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
LINC01238-204ENST00000451070 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
LINC01238-204ENST00000451070 GGA1Q9UJY5 639 aa12.73□□□□□ -0.37
LINC01238-204ENST00000451070 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
LINC01238-204ENST00000451070 CTSWP56202 376 aa12.72□□□□□ -0.37
LINC01238-204ENST00000451070 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
LINC01238-204ENST00000451070 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
LINC01238-204ENST00000451070 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
LINC01238-204ENST00000451070 HHIPL1Q96JK4 782 aa12.72□□□□□ -0.37
LINC01238-204ENST00000451070 ZNF408Q9H9D4 720 aa12.72□□□□□ -0.37
LINC01238-204ENST00000451070 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
LINC01238-204ENST00000451070 ZNF609O15014 1411 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 XDHP47989 1333 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 IL16Q14005 1332 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 WTIPA6NIX2 430 aaPredicted RBP12.71□□□□□ -0.37
LINC01238-204ENST00000451070 NEURL1BA8MQ27 555 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 MAP2K2P36507 400 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
LINC01238-204ENST00000451070 ANKRD18AQ8IVF6 992 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 GREM2Q9H772 168 aa12.71□□□□□ -0.37
LINC01238-204ENST00000451070 H7C1W4 665 aa12.7□□□□□ -0.38
LINC01238-204ENST00000451070 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
LINC01238-204ENST00000451070 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
LINC01238-204ENST00000451070 KIF4BQ2VIQ3 1234 aa12.7□□□□□ -0.38
LINC01238-204ENST00000451070 KRT26Q7Z3Y9 468 aa12.7□□□□□ -0.38
LINC01238-204ENST00000451070 ASTN2O75129 1339 aaPredicted RBP12.69□□□□□ -0.38
LINC01238-204ENST00000451070 FANCIQ9NVI1 1328 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
LINC01238-204ENST00000451070 FLIIQ13045 1269 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
LINC01238-204ENST00000451070 UBE3BQ7Z3V4 1068 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 ZIC5Q96T25 663 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 GMLQ99445 158 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 CDC5LQ99459 802 aaKnown RBP12.69□□□□□ -0.38
LINC01238-204ENST00000451070 MRS2Q9HD23 443 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
LINC01238-204ENST00000451070 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 MINPP1Q9UNW1 487 aa12.69□□□□□ -0.38
LINC01238-204ENST00000451070 G3V3G9 751 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 CASP7P55210 303 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 HUNKP57058 714 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 DCAF8Q5TAQ9 597 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 DCPSQ96C86 337 aaKnown RBP12.68□□□□□ -0.38
LINC01238-204ENST00000451070 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 CASP8AP2Q9UKL3 1982 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 MED23Q9ULK4 1368 aa12.68□□□□□ -0.38
LINC01238-204ENST00000451070 VAMP4O75379 141 aa12.67□□□□□ -0.38
LINC01238-204ENST00000451070 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
LINC01238-204ENST00000451070 GCKRQ14397 625 aa12.67□□□□□ -0.38
LINC01238-204ENST00000451070 PODNQ7Z5L7 613 aa12.67□□□□□ -0.38
LINC01238-204ENST00000451070 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms