RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 DBNDD1Q9H9R9 158 aa22.55■■□□□ 1.2
FAM3A-216ENST00000449971 RIMBP2O15034 1052 aa22.54■■□□□ 1.2
FAM3A-216ENST00000449971 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
FAM3A-216ENST00000449971 KRT26Q7Z3Y9 468 aa22.54■■□□□ 1.2
FAM3A-216ENST00000449971 PSMD14O00487 310 aa22.53■■□□□ 1.2
FAM3A-216ENST00000449971 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
FAM3A-216ENST00000449971 SH3TC1Q8TE82 1336 aa22.53■■□□□ 1.2
FAM3A-216ENST00000449971 TAF1P21675 1872 aa22.52■■□□□ 1.2
FAM3A-216ENST00000449971 ADM5C9JUS6 153 aa22.52■■□□□ 1.2
FAM3A-216ENST00000449971 SOX10P56693 466 aa22.52■■□□□ 1.2
FAM3A-216ENST00000449971 STK31Q9BXU1 1019 aa22.52■■□□□ 1.2
FAM3A-216ENST00000449971 C6orf229H3BNL8 230 aa22.51■■□□□ 1.19
FAM3A-216ENST00000449971 EGFRP00533 1210 aa22.51■■□□□ 1.19
FAM3A-216ENST00000449971 WASHC4Q2M389 1173 aa22.51■■□□□ 1.19
FAM3A-216ENST00000449971 RGMBQ6NW40 437 aa22.51■■□□□ 1.19
FAM3A-216ENST00000449971 GBA2Q9HCG7 927 aaPredicted RBP22.51■■□□□ 1.19
FAM3A-216ENST00000449971 NSFL1CQ9UNZ2 370 aaKnown RBP22.51■■□□□ 1.19
FAM3A-216ENST00000449971 FANCIQ9NVI1 1328 aa22.51■■□□□ 1.19
FAM3A-216ENST00000449971 LAMB2P55268 1798 aa22.5■■□□□ 1.19
FAM3A-216ENST00000449971 DDX58O95786 925 aaKnown RBP22.5■■□□□ 1.19
FAM3A-216ENST00000449971 ZNF157P51786 506 aaPredicted RBP22.5■■□□□ 1.19
FAM3A-216ENST00000449971 C2orf69Q8N8R5 385 aa22.5■■□□□ 1.19
FAM3A-216ENST00000449971 TNRC18O15417 2968 aaPredicted RBP22.5■■□□□ 1.19
FAM3A-216ENST00000449971 KIF23Q02241 960 aaPredicted RBP22.49■■□□□ 1.19
FAM3A-216ENST00000449971 TRIM28Q13263 835 aaKnown RBP22.49■■□□□ 1.19
FAM3A-216ENST00000449971 DOK7Q18PE1 504 aa22.49■■□□□ 1.19
FAM3A-216ENST00000449971 RTL5Q5HYW3 569 aaPredicted RBP22.49■■□□□ 1.19
FAM3A-216ENST00000449971 DCPSQ96C86 337 aaKnown RBP22.49■■□□□ 1.19
FAM3A-216ENST00000449971 FAM89AQ96GI7 184 aa22.49■■□□□ 1.19
FAM3A-216ENST00000449971 MYD88Q99836 296 aa22.49■■□□□ 1.19
FAM3A-216ENST00000449971 TRPA1O75762 1119 aa22.48■■□□□ 1.19
FAM3A-216ENST00000449971 KCNQ5Q9NR82 932 aa22.48■■□□□ 1.19
FAM3A-216ENST00000449971 FAM155AB1AL88 458 aaPredicted RBP22.47■■□□□ 1.19
FAM3A-216ENST00000449971 SLC4A2P04920 1241 aa22.47■■□□□ 1.19
FAM3A-216ENST00000449971 EXOSC9Q06265 439 aaKnown RBP22.47■■□□□ 1.19
FAM3A-216ENST00000449971 CELF1Q92879 486 aaKnown RBP22.47■■□□□ 1.19
FAM3A-216ENST00000449971 SPINK5Q9NQ38 1064 aaPredicted RBP22.47■■□□□ 1.19
FAM3A-216ENST00000449971 PDE4DIPQ5VU43 2346 aa22.47■■□□□ 1.19
FAM3A-216ENST00000449971 DUOX1Q9NRD9 1551 aa22.46■■□□□ 1.19
FAM3A-216ENST00000449971 ECE2O60344 883 aa22.46■■□□□ 1.19
FAM3A-216ENST00000449971 DPF2Q92785 391 aa22.46■■□□□ 1.19
FAM3A-216ENST00000449971 MYH16Q9H6N6 1097 aa22.46■■□□□ 1.19
FAM3A-216ENST00000449971 MAP3K2Q9Y2U5 619 aa22.46■■□□□ 1.19
FAM3A-216ENST00000449971 POLR2AP24928 1970 aaKnown RBP22.46■■□□□ 1.19
FAM3A-216ENST00000449971 ANKRD36CQ5JPF3 1778 aa22.45■■□□□ 1.19
FAM3A-216ENST00000449971 GPSM2P81274 684 aa22.45■■□□□ 1.18
FAM3A-216ENST00000449971 KSR2Q6VAB6 950 aa22.45■■□□□ 1.18
FAM3A-216ENST00000449971 TMC4Q7Z404 712 aa22.45■■□□□ 1.18
FAM3A-216ENST00000449971 CCDC102AQ96A19 550 aa22.45■■□□□ 1.18
FAM3A-216ENST00000449971 METTL22Q9BUU2 404 aaPredicted RBP22.45■■□□□ 1.18
FAM3A-216ENST00000449971 POLLQ9UGP5 575 aa22.45■■□□□ 1.18
FAM3A-216ENST00000449971 PI4KAP2A4QPH2 592 aa22.44■■□□□ 1.18
FAM3A-216ENST00000449971 VAMP4O75379 141 aa22.44■■□□□ 1.18
FAM3A-216ENST00000449971 KIF4BQ2VIQ3 1234 aa22.44■■□□□ 1.18
FAM3A-216ENST00000449971 G2E3Q7L622 706 aa22.44■■□□□ 1.18
FAM3A-216ENST00000449971 PI4KAP1Q8N8J0 262 aa22.44■■□□□ 1.18
FAM3A-216ENST00000449971 RNF186Q9NXI6 227 aa22.44■■□□□ 1.18
FAM3A-216ENST00000449971 GGA3Q9NZ52 723 aa22.44■■□□□ 1.18
FAM3A-216ENST00000449971 ASTN2O75129 1339 aaPredicted RBP22.43■■□□□ 1.18
FAM3A-216ENST00000449971 G3V3G9 751 aa22.43■■□□□ 1.18
FAM3A-216ENST00000449971 IRS4O14654 1257 aaPredicted RBP22.43■■□□□ 1.18
FAM3A-216ENST00000449971 DCAF8Q5TAQ9 597 aa22.43■■□□□ 1.18
FAM3A-216ENST00000449971 SULF1Q8IWU6 871 aa22.43■■□□□ 1.18
FAM3A-216ENST00000449971 CCDC191Q8NCU4 936 aa22.43■■□□□ 1.18
FAM3A-216ENST00000449971 ZBTB38Q8NAP3 1195 aaPredicted RBP22.42■■□□□ 1.18
FAM3A-216ENST00000449971 EYA3Q99504 573 aa22.42■■□□□ 1.18
FAM3A-216ENST00000449971 CWC25Q9NXE8 425 aaPredicted RBP22.42■■□□□ 1.18
FAM3A-216ENST00000449971 SAGE1Q9NXZ1 904 aa22.42■■□□□ 1.18
FAM3A-216ENST00000449971 RTL9Q8NET4 1388 aa22.41■■□□□ 1.18
FAM3A-216ENST00000449971 RPS12P25398 132 aaKnown RBP22.41■■□□□ 1.18
FAM3A-216ENST00000449971 JARID2Q92833 1246 aaPredicted RBP22.41■■□□□ 1.18
FAM3A-216ENST00000449971 CCER2I3L3R5 266 aa22.4■■□□□ 1.18
FAM3A-216ENST00000449971 NEXNQ0ZGT2 675 aa22.4■■□□□ 1.18
FAM3A-216ENST00000449971 SF3B3Q15393 1217 aaKnown RBP22.4■■□□□ 1.18
FAM3A-216ENST00000449971 PCDH10Q9P2E7 1040 aa22.4■■□□□ 1.18
FAM3A-216ENST00000449971 PCCAP05165 728 aaPredicted RBP22.39■■□□□ 1.17
FAM3A-216ENST00000449971 SLC10A3P09131 477 aa22.39■■□□□ 1.17
FAM3A-216ENST00000449971 HSP90B1P14625 803 aaKnown RBP22.39■■□□□ 1.17
FAM3A-216ENST00000449971 FLIIQ13045 1269 aa22.39■■□□□ 1.17
FAM3A-216ENST00000449971 TBC1D16Q8TBP0 767 aa22.39■■□□□ 1.17
FAM3A-216ENST00000449971 CDCA5Q96FF9 252 aa22.39■■□□□ 1.17
FAM3A-216ENST00000449971 CSRNP1Q96S65 589 aa22.39■■□□□ 1.17
FAM3A-216ENST00000449971 ZC3H12CQ9C0D7 883 aaKnown RBP22.38■■□□□ 1.17
FAM3A-216ENST00000449971 SCAF8Q9UPN6 1271 aaKnown RBP22.38■■□□□ 1.17
FAM3A-216ENST00000449971 LRRC37AA6NMS7 1700 aa22.37■■□□□ 1.17
FAM3A-216ENST00000449971 ZNF521Q96K83 1311 aa22.37■■□□□ 1.17
FAM3A-216ENST00000449971 COL4A1P02462 1669 aa22.37■■□□□ 1.17
FAM3A-216ENST00000449971 UFL1O94874 794 aa22.37■■□□□ 1.17
FAM3A-216ENST00000449971 IGKV5-2P06315 115 aa22.37■■□□□ 1.17
FAM3A-216ENST00000449971 FKBP5Q13451 457 aaPredicted RBP22.37■■□□□ 1.17
FAM3A-216ENST00000449971 ANKIB1Q9P2G1 1089 aa22.37■■□□□ 1.17
FAM3A-216ENST00000449971 AKAP11Q9UKA4 1901 aa22.37■■□□□ 1.17
FAM3A-216ENST00000449971 DDX60Q8IY21 1712 aaKnown RBP22.37■■□□□ 1.17
FAM3A-216ENST00000449971 RPS8P62241 208 aaKnown RBP22.36■■□□□ 1.17
FAM3A-216ENST00000449971 ANGEL2Q5VTE6 544 aaKnown RBP22.36■■□□□ 1.17
FAM3A-216ENST00000449971 CTU1Q7Z7A3 348 aaKnown RBP22.36■■□□□ 1.17
FAM3A-216ENST00000449971 VIL1P09327 827 aaKnown RBP22.35■■□□□ 1.17
FAM3A-216ENST00000449971 SCARF1Q14162 830 aa22.35■■□□□ 1.17
FAM3A-216ENST00000449971 CWF19L2Q2TBE0 894 aaKnown RBP22.35■■□□□ 1.17
FAM3A-216ENST00000449971 RASAL3Q86YV0 1011 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms