RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
SCN10A-201ENST00000449082 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 BIN1O00499 593 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 NEMFO60524 1076 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 IGHDP01880 384 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 UQCRHP07919 91 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 CALM1P0DP23 149 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 CALM2P0DP24 149 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 CALM3P0DP25 149 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 RBM17Q96I25 401 aaKnown RBP11.69□□□□□ -0.54
SCN10A-201ENST00000449082 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
SCN10A-201ENST00000449082 HOXC9P31274 260 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 GSDMDP57764 484 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 USP37Q86T82 979 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 ALS2CR12Q96Q35 445 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
SCN10A-201ENST00000449082 KIF18AQ8NI77 898 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
SCN10A-201ENST00000449082 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 TTC41PQ6P2S7 1318 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 GSTTP1A0A1W2PQM5 241 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 RBM10P98175 930 aaKnown RBP11.69□□□□□ -0.54
SCN10A-201ENST00000449082 SKAP1Q86WV1 359 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 ESPNB1AK53 854 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 KCNA6P17658 529 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 HOOK3Q86VS8 718 aa11.69□□□□□ -0.54
SCN10A-201ENST00000449082 RTL9Q8NET4 1388 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 UBE2HP62256 183 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 EYA1Q99502 592 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 CCDC172P0C7W6 258 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 NAPAP54920 295 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 RNF113AO15541 343 aaKnown RBP11.68□□□□□ -0.54
SCN10A-201ENST00000449082 CAVIN2O95810 425 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 ZSCAN30Q86W11 494 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 SYKP43405 635 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 C6orf50Q9HD87 102 aa11.68□□□□□ -0.54
SCN10A-201ENST00000449082 PUF60Q9UHX1 559 aaKnown RBP11.68□□□□□ -0.54
SCN10A-201ENST00000449082 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
SCN10A-201ENST00000449082 STAT6P42226 847 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 C16orf71Q8IYS4 520 aaPredicted RBP11.67□□□□□ -0.54
SCN10A-201ENST00000449082 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 URI1O94763 535 aaPredicted RBP11.67□□□□□ -0.54
SCN10A-201ENST00000449082 KCNG4Q8TDN1 519 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 Q6ZUG5 572 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 GDPD2Q9HCC8 539 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
SCN10A-201ENST00000449082 GNPATO15228 680 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 TMCO3Q6UWJ1 677 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 DYDC1Q8WWB3 177 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 RRP36Q96EU6 259 aaKnown RBP11.67□□□□□ -0.54
SCN10A-201ENST00000449082 YTHDC2Q9H6S0 1430 aaKnown RBP11.67□□□□□ -0.54
SCN10A-201ENST00000449082 ZSCAN22P10073 491 aaPredicted RBP11.67□□□□□ -0.54
SCN10A-201ENST00000449082 TMC6Q7Z403 805 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 MAGEB6Q8N7X4 407 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 TMX3Q96JJ7 454 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 FERMT1Q9BQL6 677 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
SCN10A-201ENST00000449082 RIMBP2O15034 1052 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 TNNI2P48788 182 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 VTI1AQ96AJ9 217 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 LRRC2Q9BYS8 371 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 ADAMTS12P58397 1594 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 DNA2P51530 1060 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
SCN10A-201ENST00000449082 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
SCN10A-201ENST00000449082 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
SCN10A-201ENST00000449082 UHRF1BP1Q6BDS2 1440 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 CALML3P27482 149 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
SCN10A-201ENST00000449082 GOPCQ9HD26 462 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 CWF19L2Q2TBE0 894 aaKnown RBP11.66□□□□□ -0.54
SCN10A-201ENST00000449082 TBC1D5Q92609 795 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 UNC13AQ9UPW8 1703 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 TNNT1P13805 278 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 IFFO1Q0D2I5 559 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 CCDC113Q9H0I3 377 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 STK32BQ9NY57 414 aa11.66□□□□□ -0.54
SCN10A-201ENST00000449082 KRT13P13646 458 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 PPM1FP49593 454 aaPredicted RBP11.65□□□□□ -0.54
SCN10A-201ENST00000449082 PLS1Q14651 629 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 NOP2P46087 812 aaKnown RBP11.65□□□□□ -0.54
SCN10A-201ENST00000449082 GRM1Q13255 1194 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 RRAGBQ5VZM2 374 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 HELBQ8NG08 1087 aaPredicted RBP11.65□□□□□ -0.54
SCN10A-201ENST00000449082 GOLGA6L9A6NEM1 432 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 GCOM1H8Y6P7 765 aaPredicted RBP11.65□□□□□ -0.54
SCN10A-201ENST00000449082 MYZAPP0CAP1 466 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 ZNF165P49910 485 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 IFI16Q16666 785 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms