RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 RNFT1Q5M7Z0 435 aa9□□□□□ -0.97
USP49-205ENST00000448078 NLRP8Q86W28 1048 aa9□□□□□ -0.97
USP49-205ENST00000448078 ZSCAN1Q8NBB4 408 aa9□□□□□ -0.97
USP49-205ENST00000448078 ABHD17AQ96GS6 310 aa9□□□□□ -0.97
USP49-205ENST00000448078 TBX22Q9Y458 520 aa9□□□□□ -0.97
USP49-205ENST00000448078 AFF2P51816 1311 aa9□□□□□ -0.97
USP49-205ENST00000448078 NCOA3Q9Y6Q9 1424 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 BMP4P12644 408 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
USP49-205ENST00000448078 ALDH16A1Q8IZ83 802 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 C8orf37Q96NL8 207 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 ZIC5Q96T25 663 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 ZCCHC2Q9C0B9 1178 aaKnown RBP8.99□□□□□ -0.97
USP49-205ENST00000448078 MBIPQ9NS73 344 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 ANKIB1Q9P2G1 1089 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 PCDHGC4Q9Y5F7 938 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 SLIT1O75093 1534 aa8.99□□□□□ -0.97
USP49-205ENST00000448078 ARHGAP31Q2M1Z3 1444 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 CDK12Q9NYV4 1490 aaPredicted RBP8.98□□□□□ -0.97
USP49-205ENST00000448078 ARHGAP23Q9P227 1491 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 LRRIQ1Q96JM4 1722 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 MAP3K10Q02779 954 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 ELOAQ14241 798 aaKnown RBP8.98□□□□□ -0.97
USP49-205ENST00000448078 SWI5Q1ZZU3 235 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 SVOPQ8N4V2 548 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 RRP7BPQ9NSQ0 103 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 ZMIZ1Q9ULJ6 1067 aa8.98□□□□□ -0.97
USP49-205ENST00000448078 ATXN7L1Q9ULK2 861 aaPredicted RBP8.98□□□□□ -0.97
USP49-205ENST00000448078 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 ABCC3O15438 1527 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 PRDM15P57071 1507 aaPredicted RBP8.97□□□□□ -0.97
USP49-205ENST00000448078 C21orf2O43822 256 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 ADAMTS2O95450 1211 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 FGFR3P22607 806 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 HIF1AQ16665 826 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 CEP63Q96MT8 703 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 CFHR5Q9BXR6 569 aa8.97□□□□□ -0.97
USP49-205ENST00000448078 STRCP1A6NGW2 1772 aa8.96□□□□□ -0.97
USP49-205ENST00000448078 NKTRP30414 1462 aaKnown RBP8.96□□□□□ -0.97
USP49-205ENST00000448078 NCOA2Q15596 1464 aa8.96□□□□□ -0.97
USP49-205ENST00000448078 FOXO3O43524 673 aa8.96□□□□□ -0.98
USP49-205ENST00000448078 KRT76Q01546 638 aa8.96□□□□□ -0.98
USP49-205ENST00000448078 SF3B2Q13435 895 aaKnown RBP8.96□□□□□ -0.98
USP49-205ENST00000448078 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
USP49-205ENST00000448078 HSH2DQ96JZ2 352 aa8.96□□□□□ -0.98
USP49-205ENST00000448078 C2orf49Q9BVC5 232 aaPredicted RBP8.96□□□□□ -0.98
USP49-205ENST00000448078 PRR12Q9ULL5 1215 aa8.96□□□□□ -0.98
USP49-205ENST00000448078 CAMSAP2Q08AD1 1489 aa8.96□□□□□ -0.98
USP49-205ENST00000448078 EHBP1L1Q8N3D4 1523 aa8.95□□□□□ -0.98
USP49-205ENST00000448078 PHLPP1O60346 1717 aa8.95□□□□□ -0.98
USP49-205ENST00000448078 BNIP3LO60238 219 aa8.95□□□□□ -0.98
USP49-205ENST00000448078 SRSF11Q05519 484 aaKnown RBP8.95□□□□□ -0.98
USP49-205ENST00000448078 GAS6Q14393 721 aa8.95□□□□□ -0.98
USP49-205ENST00000448078 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
USP49-205ENST00000448078 TRPC5Q9UL62 973 aaPredicted RBP8.95□□□□□ -0.98
USP49-205ENST00000448078 GPC6Q9Y625 555 aaPredicted RBP8.95□□□□□ -0.98
USP49-205ENST00000448078 CD33P20138 364 aa8.94□□□□□ -0.98
USP49-205ENST00000448078 MAP2K3P46734 347 aa8.94□□□□□ -0.98
USP49-205ENST00000448078 STAG2Q8N3U4 1231 aa8.94□□□□□ -0.98
USP49-205ENST00000448078 USP21Q9UK80 565 aa8.94□□□□□ -0.98
USP49-205ENST00000448078 EFCAB6Q5THR3 1501 aa8.94□□□□□ -0.98
USP49-205ENST00000448078 ZC3H13Q5T200 1668 aaKnown RBP8.94□□□□□ -0.98
USP49-205ENST00000448078 CFAP65Q6ZU64 1925 aaKnown RBP8.93□□□□□ -0.98
USP49-205ENST00000448078 MAPTP10636 758 aaKnown RBP8.93□□□□□ -0.98
USP49-205ENST00000448078 WEE1P30291 646 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
USP49-205ENST00000448078 RTN1Q16799 776 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 BRINP3Q76B58 766 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 SUSD3Q96L08 255 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 AMOTL2Q9Y2J4 779 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 MYOM3Q5VTT5 1437 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 TIAM1Q13009 1591 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 UBR1Q8IWV7 1749 aa8.93□□□□□ -0.98
USP49-205ENST00000448078 ARHGEF5Q12774 1597 aa8.92□□□□□ -0.98
USP49-205ENST00000448078 KIF15Q9NS87 1388 aa8.92□□□□□ -0.98
USP49-205ENST00000448078 PLEKHG1Q9ULL1 1385 aa8.92□□□□□ -0.98
USP49-205ENST00000448078 THBS1P07996 1170 aa8.92□□□□□ -0.98
USP49-205ENST00000448078 SRPK2P78362 688 aaKnown RBP8.92□□□□□ -0.98
USP49-205ENST00000448078 DGKZQ13574 1117 aa8.92□□□□□ -0.98
USP49-205ENST00000448078 ENAMQ9NRM1 1142 aa8.92□□□□□ -0.98
USP49-205ENST00000448078 SRCAPQ6ZRS2 3230 aa8.92□□□□□ -0.98
USP49-205ENST00000448078 DUOX2Q9NRD8 1548 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 PIK3R4Q99570 1358 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 ATP2B4P23634 1241 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 CTBSQ01459 385 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 FKBP5Q13451 457 aaPredicted RBP8.91□□□□□ -0.98
USP49-205ENST00000448078 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 NEDD1Q8NHV4 660 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 KLK14Q9P0G3 267 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 MARK1Q9P0L2 795 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 STK17AQ9UEE5 414 aa8.91□□□□□ -0.98
USP49-205ENST00000448078 SETD1AO15047 1707 aaKnown RBP8.91□□□□□ -0.98
USP49-205ENST00000448078 FAM157BP0CG42 384 aa8.9□□□□□ -0.98
USP49-205ENST00000448078 AMPD1P23109 780 aa8.9□□□□□ -0.98
USP49-205ENST00000448078 TNP2Q05952 138 aa8.9□□□□□ -0.98
USP49-205ENST00000448078 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.98
USP49-205ENST00000448078 OXCT2Q9BYC2 517 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms