RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 LDHDQ86WU2 507 aa17.82■□□□□ 0.44
SREBF1-207ENST00000447641 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-207ENST00000447641 GREM2Q9H772 168 aa17.82■□□□□ 0.44
SREBF1-207ENST00000447641 TNNQ9UQP3 1299 aa17.82■□□□□ 0.44
SREBF1-207ENST00000447641 VEGFBP49765 207 aa17.81■□□□□ 0.44
SREBF1-207ENST00000447641 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
SREBF1-207ENST00000447641 PSMD1Q99460 953 aa17.81■□□□□ 0.44
SREBF1-207ENST00000447641 RCAN3Q9UKA8 241 aa17.81■□□□□ 0.44
SREBF1-207ENST00000447641 SUCLG2Q96I99 432 aa17.8■□□□□ 0.44
SREBF1-207ENST00000447641 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-207ENST00000447641 RTFDC1Q9BY42 306 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-207ENST00000447641 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
SREBF1-207ENST00000447641 TRPM7Q96QT4 1865 aa17.8■□□□□ 0.44
SREBF1-207ENST00000447641 RABL6Q3YEC7 729 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-207ENST00000447641 LMBR1LQ6UX01 489 aa17.79■□□□□ 0.44
SREBF1-207ENST00000447641 ZNF277Q9NRM2 450 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-207ENST00000447641 IQCA1LA6NCM1 817 aa17.78■□□□□ 0.44
SREBF1-207ENST00000447641 ITGA6P23229 1130 aa17.78■□□□□ 0.44
SREBF1-207ENST00000447641 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
SREBF1-207ENST00000447641 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
SREBF1-207ENST00000447641 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
SREBF1-207ENST00000447641 TMEM88BA6NKF7 163 aa17.77■□□□□ 0.44
SREBF1-207ENST00000447641 ANKRD18AQ8IVF6 992 aa17.77■□□□□ 0.44
SREBF1-207ENST00000447641 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
SREBF1-207ENST00000447641 BICC1Q9H694 974 aaKnown RBP17.77■□□□□ 0.44
SREBF1-207ENST00000447641 BSDC1Q9NW68 430 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-207ENST00000447641 WBP1LQ9NX94 342 aa17.77■□□□□ 0.44
SREBF1-207ENST00000447641 RLBP1P12271 317 aa17.76■□□□□ 0.43
SREBF1-207ENST00000447641 DZIP1LQ8IYY4 767 aaKnown RBP17.76■□□□□ 0.43
SREBF1-207ENST00000447641 MPNDQ8N594 471 aa17.76■□□□□ 0.43
SREBF1-207ENST00000447641 TMEM57Q8N5G2 664 aa17.76■□□□□ 0.43
SREBF1-207ENST00000447641 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-207ENST00000447641 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
SREBF1-207ENST00000447641 PODXL2Q9NZ53 605 aa17.76■□□□□ 0.43
SREBF1-207ENST00000447641 DUOX1Q9NRD9 1551 aa17.75■□□□□ 0.43
SREBF1-207ENST00000447641 SPEF2Q9C093 1822 aa17.75■□□□□ 0.43
SREBF1-207ENST00000447641 CTCFP49711 727 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-207ENST00000447641 IFIT5Q13325 482 aaKnown RBP17.75■□□□□ 0.43
SREBF1-207ENST00000447641 EAPPQ56P03 285 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-207ENST00000447641 MEIS3Q99687 375 aa17.75■□□□□ 0.43
SREBF1-207ENST00000447641 ANKRD18BA2A2Z9 1011 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 FZD9O00144 591 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-207ENST00000447641 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
SREBF1-207ENST00000447641 EPHX2P34913 555 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 LBX1P52954 281 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 GPSM2P81274 684 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 DPP8Q6V1X1 898 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-207ENST00000447641 HACL1Q9UJ83 578 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 MINPP1Q9UNW1 487 aa17.74■□□□□ 0.43
SREBF1-207ENST00000447641 TNRC18O15417 2968 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-207ENST00000447641 GNAI3P08754 354 aa17.73■□□□□ 0.43
SREBF1-207ENST00000447641 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
SREBF1-207ENST00000447641 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
SREBF1-207ENST00000447641 MAP1SQ66K74 1059 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-207ENST00000447641 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
SREBF1-207ENST00000447641 HDAC5Q9UQL6 1122 aa17.73■□□□□ 0.43
SREBF1-207ENST00000447641 IGHMBP2P38935 993 aaKnown RBP17.72■□□□□ 0.43
SREBF1-207ENST00000447641 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
SREBF1-207ENST00000447641 POLLQ9UGP5 575 aa17.72■□□□□ 0.43
SREBF1-207ENST00000447641 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
SREBF1-207ENST00000447641 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-207ENST00000447641 MS4A1P11836 297 aa17.71■□□□□ 0.43
SREBF1-207ENST00000447641 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
SREBF1-207ENST00000447641 TBC1D16Q8TBP0 767 aa17.71■□□□□ 0.43
SREBF1-207ENST00000447641 CHMP3Q9Y3E7 222 aa17.71■□□□□ 0.43
SREBF1-207ENST00000447641 PLIN1O60240 522 aa17.7■□□□□ 0.42
SREBF1-207ENST00000447641 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-207ENST00000447641 KIAA2012Q0VF49 1180 aa17.7■□□□□ 0.42
SREBF1-207ENST00000447641 CNTROBQ8N137 903 aa17.7■□□□□ 0.42
SREBF1-207ENST00000447641 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
SREBF1-207ENST00000447641 AIDAQ96BJ3 306 aa17.7■□□□□ 0.42
SREBF1-207ENST00000447641 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-207ENST00000447641 MPHOSPH8Q99549 860 aa17.7■□□□□ 0.42
SREBF1-207ENST00000447641 LRRFIP2Q9Y608 721 aaKnown RBP17.7■□□□□ 0.42
SREBF1-207ENST00000447641 XDHP47989 1333 aa17.7■□□□□ 0.42
SREBF1-207ENST00000447641 MTX1Q13505 466 aa17.69■□□□□ 0.42
SREBF1-207ENST00000447641 CLEC11AQ9Y240 323 aa17.69■□□□□ 0.42
SREBF1-207ENST00000447641 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
SREBF1-207ENST00000447641 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 SCNN1DP51172 638 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 PDE3AQ14432 1141 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 AOC3Q16853 763 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 GPC2Q8N158 579 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 ANKRD2Q9GZV1 360 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 ANKIB1Q9P2G1 1089 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 GGA1Q9UJY5 639 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 RIPOR2Q9Y4F9 1068 aa17.68■□□□□ 0.42
SREBF1-207ENST00000447641 WTIPA6NIX2 430 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-207ENST00000447641 PPIP5K2O43314 1243 aa17.67■□□□□ 0.42
SREBF1-207ENST00000447641 GNAI2P04899 355 aa17.67■□□□□ 0.42
SREBF1-207ENST00000447641 ATP2B4P23634 1241 aa17.67■□□□□ 0.42
SREBF1-207ENST00000447641 CHRNDQ07001 517 aa17.67■□□□□ 0.42
SREBF1-207ENST00000447641 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
SREBF1-207ENST00000447641 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-207ENST00000447641 ITPRIPQ8IWB1 547 aa17.67■□□□□ 0.42
SREBF1-207ENST00000447641 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms