RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TAF7Q15545 349 aaPredicted RBP8.96□□□□□ -0.98
SMG1-202ENST00000446231 LARP1Q6PKG0 1096 aaKnown RBP8.96□□□□□ -0.98
SMG1-202ENST00000446231 RIPOR2Q9Y4F9 1068 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 LMNTD2Q8IXW0 634 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 CCDC155Q8N6L0 562 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 CNGA4Q8IV77 575 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 EIF3CLB5ME19 914 aaKnown RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 FKBP4Q02790 459 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMG1-202ENST00000446231 EIF3CQ99613 913 aaKnown RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 GOPCQ9HD26 462 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 ST7Q9NRC1 585 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 PSDA5PKW4 1024 aaPredicted RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 NLRP12P59046 1061 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 TTC39AQ5SRH9 613 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 Q6ZUG5 572 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 GDAP1L1Q96MZ0 367 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 MEIS3Q99687 375 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 TMCO5BA8MYB1 307 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 WDR66Q8TBY9 1149 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 FRMD3A2A2Y4 597 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 NAA30Q147X3 362 aaPredicted RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 SPATS2Q86XZ4 545 aaKnown RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 ADAM21Q9UKJ8 722 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 CEP83Q9Y592 693 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 FAM114A1Q8IWE2 563 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 ZCCHC17Q9NP64 241 aaKnown RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 KCNH3Q9ULD8 1083 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 SUFUQ9UMX1 484 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 GCOM1H8Y6P7 765 aaPredicted RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 MYZAPP0CAP1 466 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 ERCC3P19447 782 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 HPDP32754 393 aaPredicted RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 PTPN23Q9H3S7 1636 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 KIF1CO43896 1103 aaKnown RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 CCDC42Q96M95 316 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 FAN1Q9Y2M0 1017 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 PLEKHO1Q53GL0 409 aaPredicted RBP8.95□□□□□ -0.98
SMG1-202ENST00000446231 CFAP58Q5T655 872 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 SAMD15Q9P1V8 674 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMG1-202ENST00000446231 IFT74Q96LB3 600 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 RALGAPBQ86X10 1494 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 NUTM2GQ5VZR2 741 aa8.95□□□□□ -0.98
SMG1-202ENST00000446231 CDC37L1Q7L3B6 337 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 CDK5RAP3Q96JB5 506 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 RRAGBQ5VZM2 374 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 TTC5Q8N0Z6 440 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 TTF2Q9UNY4 1162 aaKnown RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 NSFL1CQ9UNZ2 370 aaKnown RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 MYL5Q02045 173 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 AP1ARQ63HQ0 302 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 FLIIQ13045 1269 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 SLC12A7Q9Y666 1083 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 CYLC1P35663 651 aaPredicted RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 RAD51AP2Q09MP3 1159 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 LONRF2Q1L5Z9 754 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 CYP26C1Q6V0L0 522 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 IFT20Q8IY31 132 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 ANKRD24Q8TF21 1146 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 ZNF202O95125 648 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 ANO1Q5XXA6 986 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 BMP2KQ9NSY1 1161 aaPredicted RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 RTL1A6NKG5 1358 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 CCDC122Q5T0U0 273 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 VPS36Q86VN1 386 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 NMIQ13287 307 aaPredicted RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 LUC7L2Q9Y383 392 aaKnown RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 GSPT1P15170 499 aaKnown RBP8.94□□□□□ -0.98
SMG1-202ENST00000446231 CCDC6Q16204 474 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 FBXO18Q8NFZ0 1043 aa8.94□□□□□ -0.98
SMG1-202ENST00000446231 NR1I2O75469 434 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 IFT88Q13099 833 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 PYM1Q9BRP8 204 aaKnown RBP8.93□□□□□ -0.98
SMG1-202ENST00000446231 CXorf56Q9H5V9 222 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 UBE4AQ14139 1066 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 TMTC1Q8IUR5 882 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 SWAP70Q9UH65 585 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 FAM83GA6ND36 823 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 PPP2R2CQ9Y2T4 447 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 MLECQ14165 292 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 DHX32Q7L7V1 743 aaKnown RBP8.93□□□□□ -0.98
SMG1-202ENST00000446231 KAT6BQ8WYB5 2073 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 ATP11AP98196 1134 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 SEPT11Q9NVA2 429 aaKnown RBP8.93□□□□□ -0.98
SMG1-202ENST00000446231 STMN4Q9H169 189 aaPredicted RBP8.93□□□□□ -0.98
SMG1-202ENST00000446231 RPS6KB1P23443 525 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 TSGA10Q9BZW7 698 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 PLEKHA4Q9H4M7 779 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 GBP1P32455 592 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 GYS2P54840 703 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 TADA2BQ86TJ2 420 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 DESI2Q9BSY9 194 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 TRIM4Q9C037 500 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 CEP126Q9P2H0 1117 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 UBXN1Q04323 297 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 PHACTR3Q96KR7 559 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 CCDC8Q9H0W5 538 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms