RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 FBXO33Q7Z6M2 555 aa7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 NAGPAQ9UK23 515 aa7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 STARD13Q9Y3M8 1113 aa7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 CCDC9Q9Y3X0 531 aaKnown RBP7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 SHISA8B8ZZ34 492 aa7.64□□□□□ -1.19
HMGB1P48-201ENST00000446155 CPNE3O75131 537 aaKnown RBP7.64□□□□□ -1.19
HMGB1P48-201ENST00000446155 GALNT12Q8IXK2 581 aa7.64□□□□□ -1.19
HMGB1P48-201ENST00000446155 PMEPA1Q969W9 287 aa7.64□□□□□ -1.19
HMGB1P48-201ENST00000446155 UBE2OQ9C0C9 1292 aaKnown RBP7.64□□□□□ -1.19
HMGB1P48-201ENST00000446155 CES1P23141 567 aa7.63□□□□□ -1.19
HMGB1P48-201ENST00000446155 HYAL2Q12891 473 aa7.63□□□□□ -1.19
HMGB1P48-201ENST00000446155 PCSK7Q16549 785 aa7.63□□□□□ -1.19
HMGB1P48-201ENST00000446155 EDARADDQ8WWZ3 215 aa7.63□□□□□ -1.19
HMGB1P48-201ENST00000446155 KANSL3Q9P2N6 904 aa7.63□□□□□ -1.19
HMGB1P48-201ENST00000446155 AMOTL2Q9Y2J4 779 aa7.63□□□□□ -1.19
HMGB1P48-201ENST00000446155 LOC102724428A0A0B4J2F2 783 aa7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 PNMA6FA0A0J9YX94 578 aa7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 PHF20L1A8MW92 1017 aa7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 ARHGEF15O94989 841 aa7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 SIK1P57059 783 aa7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 C20orf204Q6ZNR8 217 aa7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 CEP120Q8N960 986 aa7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 NSUN5Q96P11 429 aaKnown RBP7.62□□□□□ -1.19
HMGB1P48-201ENST00000446155 PEAR1Q5VY43 1037 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P48-201ENST00000446155 GALNT6Q8NCL4 622 aa7.61□□□□□ -1.19
HMGB1P48-201ENST00000446155 CCDC74AQ96AQ1 378 aa7.61□□□□□ -1.19
HMGB1P48-201ENST00000446155 BTBD6Q96KE9 485 aa7.61□□□□□ -1.19
HMGB1P48-201ENST00000446155 SETDB2Q96T68 719 aa7.61□□□□□ -1.19
HMGB1P48-201ENST00000446155 WWC3Q9ULE0 1092 aa7.61□□□□□ -1.19
HMGB1P48-201ENST00000446155 J3QW42 95 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 NFKBIEO00221 500 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 POLR3DP05423 398 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 ACPPP15309 386 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 MAPK8P45983 427 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 TBC1D8BQ0IIM8 1120 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 PERM1Q5SV97 790 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 FBF1Q8TES7 1133 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 LPIN3Q9BQK8 851 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 IGFLR1Q9H665 355 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 LATS2Q9NRM7 1088 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 FRRS1LQ9P0K9 344 aa7.6□□□□□ -1.19
HMGB1P48-201ENST00000446155 ALBP02768 609 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 EDN3P14138 238 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 EAPPQ56P03 285 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 KANK3Q6NY19 840 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 HFE2Q6ZVN8 426 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 CHSY3Q70JA7 882 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 TTC9Q92623 222 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 DZANK1Q9NVP4 752 aa7.59□□□□□ -1.19
HMGB1P48-201ENST00000446155 A0A1W2PP55 124 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 LDHBP07195 334 aaKnown RBP7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 CPB1P15086 417 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 IRS1P35568 1242 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 TAGLNQ01995 201 aaKnown RBP7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 COL9A3Q14050 684 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 GRIK5Q16478 980 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 KIAA0319Q5VV43 1072 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 PSAPL1Q6NUJ1 521 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 NPHS2Q9NP85 383 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 PRDM6Q9NQX0 595 aa7.58□□□□□ -1.2
HMGB1P48-201ENST00000446155 PRPF40AO75400 957 aaKnown RBP7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 EIF2AK2P19525 551 aaKnown RBP7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 ALAS2P22557 587 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 DGKGP49619 791 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 ATP11AP98196 1134 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 ALG1LQ6GMV1 187 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 ILDR2Q71H61 639 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 NCAPG2Q86XI2 1143 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 MICALL1Q8N3F8 863 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 SVOPQ8N4V2 548 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 ZSCAN1Q8NBB4 408 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 EPS8L3Q8TE67 593 aaKnown RBP7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 PLD4Q96BZ4 506 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 ZKSCAN3Q9BRR0 538 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 RASSF4Q9H2L5 321 aa7.57□□□□□ -1.2
HMGB1P48-201ENST00000446155 RBM47A0AV96 593 aaKnown RBP7.56□□□□□ -1.2
HMGB1P48-201ENST00000446155 GHRHP01286 108 aa7.56□□□□□ -1.2
HMGB1P48-201ENST00000446155 PI16Q6UXB8 463 aa7.56□□□□□ -1.2
HMGB1P48-201ENST00000446155 HHIPQ96QV1 700 aa7.56□□□□□ -1.2
HMGB1P48-201ENST00000446155 PBX4Q9BYU1 374 aa7.56□□□□□ -1.2
HMGB1P48-201ENST00000446155 ATP2B2Q01814 1243 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 MAP3K10Q02779 954 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 ADAMTSL4Q6UY14 1074 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 GLIS3Q8NEA6 775 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 TCF12Q99081 682 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 OSMRQ99650 979 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 BHLHE41Q9C0J9 482 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 SUV39H2Q9H5I1 410 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
HMGB1P48-201ENST00000446155 M0R082 166 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 TRPA1O75762 1119 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 ZNF16P17020 682 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 INSM1Q01101 510 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms