RNA–Protein interactions for RNA: ENST00000446039.2

RPL35P4-201, Transcript of ribosomal protein L35 pseudogene 4, humanhuman

BASIC

Gene RPL35P4, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P4-201ENST00000446039 U2AF1L5P0DN76 240 aaPredicted RBP11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 MYL6BP14649 208 aa11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 U2AF1Q01081 240 aaKnown RBP eCLIP11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 SCARF1Q14162 830 aa11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 MCM10Q7L590 875 aa11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 ZNF34Q8IZ26 560 aa11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
RPL35P4-201ENST00000446039 KDM3BQ7LBC6 1761 aa11.26□□□□□ -0.61
RPL35P4-201ENST00000446039 C6orf229H3BNL8 230 aa11.26□□□□□ -0.61
RPL35P4-201ENST00000446039 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
RPL35P4-201ENST00000446039 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
RPL35P4-201ENST00000446039 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
RPL35P4-201ENST00000446039 MYCP01106 439 aaPredicted RBP11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 NEFMP07197 916 aa11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 HCLS1P14317 486 aaPredicted RBP11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 GRAPQ13588 217 aa11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 PRKG1Q13976 671 aa11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 GRAPLQ8TC17 118 aaPredicted RBP11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 PHACTR3Q96KR7 559 aa11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 CFHR5Q9BXR6 569 aa11.25□□□□□ -0.61
RPL35P4-201ENST00000446039 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 SLC4A8Q2Y0W8 1093 aa11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 ARMC5Q96C12 935 aa11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 MIS18AQ9NYP9 233 aa11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 NSFL1CQ9UNZ2 370 aaKnown RBP11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 ZNF609O15014 1411 aa11.24□□□□□ -0.61
RPL35P4-201ENST00000446039 TCIRG1Q13488 830 aa11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 PARP10Q53GL7 1025 aa11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 RTF1Q92541 710 aaKnown RBP11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 ZNF428Q96B54 188 aa11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 COL3A1P02461 1466 aaPredicted RBP11.23□□□□□ -0.61
RPL35P4-201ENST00000446039 COL4A1P02462 1669 aa11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 PRKAR2BP31323 418 aa11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 PTPN12Q05209 780 aaKnown RBP11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 ERO1AQ96HE7 468 aa11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 ZNF333Q96JL9 665 aa11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 EFCC1Q9HA90 598 aa11.22□□□□□ -0.61
RPL35P4-201ENST00000446039 PSME4Q14997 1843 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 G3V3G9 751 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 ALDH1A1P00352 501 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 GPSM2P81274 684 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 CAP1Q01518 475 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 DPF3Q92784 378 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 MYOZ2Q9NPC6 264 aa11.21□□□□□ -0.61
RPL35P4-201ENST00000446039 UNC80Q8N2C7 3258 aa11.21□□□□□ -0.62
RPL35P4-201ENST00000446039 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 NF2P35240 595 aa11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 ZNF280AP59817 542 aaPredicted RBP11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 EYA3Q99504 573 aa11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 THUMPD2Q9BTF0 503 aaKnown RBP11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 FZD1Q9UP38 647 aa11.2□□□□□ -0.62
RPL35P4-201ENST00000446039 WTIPA6NIX2 430 aaPredicted RBP11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 SOX1O00570 391 aaPredicted RBP11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 NBPF9Q3BBW0 867 aa11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 TMC4Q7Z404 712 aa11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 MRS2Q9HD23 443 aa11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 PTCH2Q9Y6C5 1203 aa11.19□□□□□ -0.62
RPL35P4-201ENST00000446039 MAPK8IP3Q9UPT6 1336 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 CRHR2Q13324 411 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 ARMC9Q7Z3E5 817 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 NBPF11Q86T75 865 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 AGBL3Q8NEM8 1001 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 TBC1D16Q8TBP0 767 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 RSPH6AQ9H0K4 717 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 ANGEL1Q9UNK9 670 aaKnown RBP11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 ZSWIM8A7E2V4 1837 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 LAMB1P07942 1786 aa11.18□□□□□ -0.62
RPL35P4-201ENST00000446039 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
RPL35P4-201ENST00000446039 SP3Q02447 781 aa11.17□□□□□ -0.62
RPL35P4-201ENST00000446039 TAF7Q15545 349 aaPredicted RBP11.17□□□□□ -0.62
RPL35P4-201ENST00000446039 COL25A1Q9BXS0 654 aaPredicted RBP11.17□□□□□ -0.62
RPL35P4-201ENST00000446039 LAMA3Q16787 3333 aa11.17□□□□□ -0.62
RPL35P4-201ENST00000446039 ANXA1P04083 346 aa11.16□□□□□ -0.62
RPL35P4-201ENST00000446039 NLRP10Q86W26 655 aa11.16□□□□□ -0.62
RPL35P4-201ENST00000446039 SH3TC2Q8TF17 1288 aa11.16□□□□□ -0.62
RPL35P4-201ENST00000446039 SLC10A4Q96EP9 437 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms