RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 METTL24Q5JXM2 366 aa12.59□□□□□ -0.39
CALD1-211ENST00000445569 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
CALD1-211ENST00000445569 GORABQ5T7V8 394 aa12.59□□□□□ -0.39
CALD1-211ENST00000445569 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
CALD1-211ENST00000445569 DNAJC2Q99543 621 aaKnown RBP12.59□□□□□ -0.39
CALD1-211ENST00000445569 NYXQ9GZU5 481 aa12.59□□□□□ -0.39
CALD1-211ENST00000445569 LSG1Q9H089 658 aaKnown RBP12.59□□□□□ -0.39
CALD1-211ENST00000445569 GREM2Q9H772 168 aa12.59□□□□□ -0.39
CALD1-211ENST00000445569 CNNM1Q9NRU3 951 aa12.59□□□□□ -0.39
CALD1-211ENST00000445569 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
CALD1-211ENST00000445569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
CALD1-211ENST00000445569 A0A1B0GUL6 1792 aa12.58□□□□□ -0.39
CALD1-211ENST00000445569 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
CALD1-211ENST00000445569 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
CALD1-211ENST00000445569 RNF20Q5VTR2 975 aa12.58□□□□□ -0.4
CALD1-211ENST00000445569 SUSD4Q5VX71 490 aa12.58□□□□□ -0.4
CALD1-211ENST00000445569 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.4
CALD1-211ENST00000445569 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
CALD1-211ENST00000445569 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
CALD1-211ENST00000445569 IFIT1P09914 478 aaKnown RBP12.57□□□□□ -0.4
CALD1-211ENST00000445569 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
CALD1-211ENST00000445569 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
CALD1-211ENST00000445569 NBR1Q14596 966 aa12.57□□□□□ -0.4
CALD1-211ENST00000445569 TTC39AQ5SRH9 613 aa12.57□□□□□ -0.4
CALD1-211ENST00000445569 KBTBD3Q8NAB2 608 aa12.57□□□□□ -0.4
CALD1-211ENST00000445569 HMG20BQ9P0W2 317 aa12.57□□□□□ -0.4
CALD1-211ENST00000445569 NARFQ9UHQ1 456 aa12.57□□□□□ -0.4
CALD1-211ENST00000445569 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
CALD1-211ENST00000445569 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
CALD1-211ENST00000445569 GNPATO15228 680 aa12.56□□□□□ -0.4
CALD1-211ENST00000445569 ZPR1O75312 459 aa12.56□□□□□ -0.4
CALD1-211ENST00000445569 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
CALD1-211ENST00000445569 KCNJ4P48050 445 aa12.56□□□□□ -0.4
CALD1-211ENST00000445569 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
CALD1-211ENST00000445569 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
CALD1-211ENST00000445569 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
CALD1-211ENST00000445569 RIPOR2Q9Y4F9 1068 aa12.56□□□□□ -0.4
CALD1-211ENST00000445569 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
CALD1-211ENST00000445569 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
CALD1-211ENST00000445569 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
CALD1-211ENST00000445569 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
CALD1-211ENST00000445569 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
CALD1-211ENST00000445569 NEK4P51957 841 aa12.55□□□□□ -0.4
CALD1-211ENST00000445569 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
CALD1-211ENST00000445569 ZNF512BQ96KM6 892 aaPredicted RBP12.55□□□□□ -0.4
CALD1-211ENST00000445569 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
CALD1-211ENST00000445569 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
CALD1-211ENST00000445569 IL25Q9H293 177 aa12.55□□□□□ -0.4
CALD1-211ENST00000445569 ANO8Q9HCE9 1232 aaPredicted RBP12.55□□□□□ -0.4
CALD1-211ENST00000445569 CWC22Q9HCG8 908 aaKnown RBP12.55□□□□□ -0.4
CALD1-211ENST00000445569 DOCK2Q92608 1830 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 A0A0D9SFI3 127 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 SLC5A1P13866 664 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 DDIT3P35638 169 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 KRT32Q14532 448 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 TTF1Q15361 905 aaPredicted RBP12.54□□□□□ -0.4
CALD1-211ENST00000445569 NFKBIBQ15653 356 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 KCNB2Q92953 911 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 XAGE2Q96GT9 111 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 PALD1Q9ULE6 856 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 SNX14Q9Y5W7 946 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
CALD1-211ENST00000445569 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
CALD1-211ENST00000445569 GOLIM4O00461 696 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 PDE8BO95263 885 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
CALD1-211ENST00000445569 PTMSP20962 102 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 PSMA5P28066 241 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 TIMM10P62072 90 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
CALD1-211ENST00000445569 SYNE4Q8N205 404 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 LPIN2Q92539 896 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 FAM227BQ96M60 508 aa12.53□□□□□ -0.4
CALD1-211ENST00000445569 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.53□□□□□ -0.4
CALD1-211ENST00000445569 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
CALD1-211ENST00000445569 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 HCLS1P14317 486 aaPredicted RBP12.52□□□□□ -0.41
CALD1-211ENST00000445569 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
CALD1-211ENST00000445569 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
CALD1-211ENST00000445569 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 ZSCAN25Q6NSZ9 544 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 MAP4K1Q92918 833 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 GBP4Q96PP9 640 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 STK32BQ9NY57 414 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 RPAP1Q9BWH6 1393 aaPredicted RBP12.52□□□□□ -0.41
CALD1-211ENST00000445569 AKAP11Q9UKA4 1901 aa12.52□□□□□ -0.41
CALD1-211ENST00000445569 SSFA2P28290 1259 aa12.51□□□□□ -0.41
CALD1-211ENST00000445569 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
CALD1-211ENST00000445569 NUCB2P80303 420 aa12.51□□□□□ -0.41
CALD1-211ENST00000445569 NECTIN1Q15223 517 aa12.51□□□□□ -0.41
CALD1-211ENST00000445569 USPL1Q5W0Q7 1092 aa12.51□□□□□ -0.41
CALD1-211ENST00000445569 PRPF40BQ6NWY9 871 aaKnown RBP12.51□□□□□ -0.41
CALD1-211ENST00000445569 NBPF5PQ86XG9 351 aaPredicted RBP12.51□□□□□ -0.41
CALD1-211ENST00000445569 ANKRD18AQ8IVF6 992 aa12.51□□□□□ -0.41
CALD1-211ENST00000445569 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms