RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
LINC02549-201ENST00000445346 DLEC1Q9Y238 1755 aa10.64□□□□□ -0.71
LINC02549-201ENST00000445346 TIAM2Q8IVF5 1701 aa10.64□□□□□ -0.71
LINC02549-201ENST00000445346 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
LINC02549-201ENST00000445346 CAMTA2O94983 1202 aa10.63□□□□□ -0.71
LINC02549-201ENST00000445346 CCDC93Q567U6 631 aa10.63□□□□□ -0.71
LINC02549-201ENST00000445346 CCER1Q8TC90 406 aaPredicted RBP10.63□□□□□ -0.71
LINC02549-201ENST00000445346 TSR3Q9UJK0 312 aaKnown RBP10.63□□□□□ -0.71
LINC02549-201ENST00000445346 ZNF652Q9Y2D9 606 aa10.63□□□□□ -0.71
LINC02549-201ENST00000445346 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
LINC02549-201ENST00000445346 KIF7Q2M1P5 1343 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 TMEM88BA6NKF7 163 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 FAM177BA6PVY3 158 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 FOXN1O15353 648 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 KCNQ3O43525 872 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 NPR1P16066 1061 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
LINC02549-201ENST00000445346 PIP4K2AP48426 406 aaPredicted RBP10.61□□□□□ -0.71
LINC02549-201ENST00000445346 CTCFP49711 727 aaPredicted RBP10.61□□□□□ -0.71
LINC02549-201ENST00000445346 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC02549-201ENST00000445346 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 TPTE2Q6XPS3 522 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 RTF1Q92541 710 aaKnown RBP10.61□□□□□ -0.71
LINC02549-201ENST00000445346 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
LINC02549-201ENST00000445346 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 CNTNAP1P78357 1384 aa10.61□□□□□ -0.71
LINC02549-201ENST00000445346 PER1O15534 1290 aaPredicted RBP10.6□□□□□ -0.71
LINC02549-201ENST00000445346 RNF40O75150 1001 aa10.6□□□□□ -0.71
LINC02549-201ENST00000445346 VEGFBP49765 207 aa10.6□□□□□ -0.71
LINC02549-201ENST00000445346 RTKN2Q8IZC4 609 aa10.6□□□□□ -0.71
LINC02549-201ENST00000445346 PRDM10Q9NQV6 1147 aa10.6□□□□□ -0.71
LINC02549-201ENST00000445346 HACL1Q9UJ83 578 aa10.6□□□□□ -0.71
LINC02549-201ENST00000445346 NIP7Q9Y221 180 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC02549-201ENST00000445346 PASKQ96RG2 1323 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 SNRPA1P09661 255 aaKnown RBP10.59□□□□□ -0.71
LINC02549-201ENST00000445346 PRKAR2BP31323 418 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 EPHX2P34913 555 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 PNMA8AQ86V59 439 aaPredicted RBP10.59□□□□□ -0.71
LINC02549-201ENST00000445346 C7orf43Q8WVR3 580 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 CFAP53Q96M91 514 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 UBR2Q8IWV8 1755 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 FER1L6Q2WGJ9 1857 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
LINC02549-201ENST00000445346 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
LINC02549-201ENST00000445346 PRAMEF22A3QJZ6 481 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 OATP04181 439 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 ALDH1B1P30837 517 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 CNTROBQ8N137 903 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 JDP2Q8WYK2 163 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 PHACTR3Q96KR7 559 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 TMUB1Q9BVT8 246 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 ABT1Q9ULW3 272 aaKnown RBP10.58□□□□□ -0.72
LINC02549-201ENST00000445346 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 DICER1Q9UPY3 1922 aaKnown RBP10.58□□□□□ -0.72
LINC02549-201ENST00000445346 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.72
LINC02549-201ENST00000445346 SCN7AQ01118 1682 aa10.57□□□□□ -0.72
LINC02549-201ENST00000445346 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
LINC02549-201ENST00000445346 ITGBL1O95965 494 aaPredicted RBP10.57□□□□□ -0.72
LINC02549-201ENST00000445346 IARSP41252 1262 aaKnown RBP10.57□□□□□ -0.72
LINC02549-201ENST00000445346 LBX1P52954 281 aa10.57□□□□□ -0.72
LINC02549-201ENST00000445346 DEFB115Q30KQ5 88 aa10.57□□□□□ -0.72
LINC02549-201ENST00000445346 MAP1SQ66K74 1059 aaPredicted RBP10.57□□□□□ -0.72
LINC02549-201ENST00000445346 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
LINC02549-201ENST00000445346 MCM10Q7L590 875 aa10.57□□□□□ -0.72
LINC02549-201ENST00000445346 COL11A2P13942 1736 aaPredicted RBP10.57□□□□□ -0.72
LINC02549-201ENST00000445346 RNF123Q5XPI4 1314 aa10.57□□□□□ -0.72
LINC02549-201ENST00000445346 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
LINC02549-201ENST00000445346 U2AF1L5P0DN76 240 aaPredicted RBP10.56□□□□□ -0.72
LINC02549-201ENST00000445346 LMOD1P29536 600 aaPredicted RBP10.56□□□□□ -0.72
LINC02549-201ENST00000445346 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
LINC02549-201ENST00000445346 PPP4CP60510 307 aa10.56□□□□□ -0.72
LINC02549-201ENST00000445346 U2AF1Q01081 240 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINC02549-201ENST00000445346 MAP2K1Q02750 393 aaPredicted RBP10.56□□□□□ -0.72
LINC02549-201ENST00000445346 GPC2Q8N158 579 aa10.56□□□□□ -0.72
LINC02549-201ENST00000445346 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
LINC02549-201ENST00000445346 GJA3Q9Y6H8 435 aa10.56□□□□□ -0.72
LINC02549-201ENST00000445346 KLRG2A4D1S0 409 aaPredicted RBP10.55□□□□□ -0.72
LINC02549-201ENST00000445346 FZD9O00144 591 aa10.55□□□□□ -0.72
LINC02549-201ENST00000445346 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
LINC02549-201ENST00000445346 NGEFQ8N5V2 710 aa10.55□□□□□ -0.72
LINC02549-201ENST00000445346 BEGAINQ9BUH8 593 aa10.55□□□□□ -0.72
LINC02549-201ENST00000445346 NYXQ9GZU5 481 aa10.55□□□□□ -0.72
LINC02549-201ENST00000445346 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
LINC02549-201ENST00000445346 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
LINC02549-201ENST00000445346 SCN4AP35499 1836 aa10.54□□□□□ -0.72
LINC02549-201ENST00000445346 RASSF10A6NK89 507 aa10.54□□□□□ -0.72
LINC02549-201ENST00000445346 GRM1Q13255 1194 aa10.54□□□□□ -0.72
LINC02549-201ENST00000445346 CACNA1SQ13698 1873 aa10.54□□□□□ -0.72
LINC02549-201ENST00000445346 DCTN1Q14203 1278 aa10.54□□□□□ -0.72
LINC02549-201ENST00000445346 HLFQ16534 295 aa10.54□□□□□ -0.72
LINC02549-201ENST00000445346 NBPF10Q6P3W6 841 aaKnown RBP10.54□□□□□ -0.72
LINC02549-201ENST00000445346 NBPF15Q8N660 670 aa10.54□□□□□ -0.72
LINC02549-201ENST00000445346 RPGRQ92834 1020 aaKnown RBP10.54□□□□□ -0.72
LINC02549-201ENST00000445346 TMX4Q9H1E5 349 aaPredicted RBP10.54□□□□□ -0.72
LINC02549-201ENST00000445346 COL3A1P02461 1466 aaPredicted RBP10.54□□□□□ -0.72
LINC02549-201ENST00000445346 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 NEFMP07197 916 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms