RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-213ENST00000445268 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
RPE-213ENST00000445268 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
RPE-213ENST00000445268 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
RPE-213ENST00000445268 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.44
RPE-213ENST00000445268 U2SURPO15042 1029 aaKnown RBP12.27□□□□□ -0.45
RPE-213ENST00000445268 BBOX1O75936 387 aa12.27□□□□□ -0.45
RPE-213ENST00000445268 MYL6BP14649 208 aa12.27□□□□□ -0.45
RPE-213ENST00000445268 PTPN12Q05209 780 aaKnown RBP12.27□□□□□ -0.45
RPE-213ENST00000445268 GRAPQ13588 217 aa12.27□□□□□ -0.45
RPE-213ENST00000445268 PRKG1Q13976 671 aa12.27□□□□□ -0.45
RPE-213ENST00000445268 GRAPLQ8TC17 118 aaPredicted RBP12.27□□□□□ -0.45
RPE-213ENST00000445268 COL25A1Q9BXS0 654 aaPredicted RBP12.27□□□□□ -0.45
RPE-213ENST00000445268 RRP7AQ9Y3A4 280 aaKnown RBP12.27□□□□□ -0.45
RPE-213ENST00000445268 IGF2BP3O00425 579 aaKnown RBP eCLIP12.26□□□□□ -0.45
RPE-213ENST00000445268 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 PPP1R42Q7Z4L9 355 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 ERO1AQ96HE7 468 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 PHACTR3Q96KR7 559 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 PRO3102Q9H379 93 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 POLLQ9UGP5 575 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 FZD1Q9UP38 647 aa12.26□□□□□ -0.45
RPE-213ENST00000445268 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
RPE-213ENST00000445268 VIL1P09327 827 aaKnown RBP12.25□□□□□ -0.45
RPE-213ENST00000445268 ZNF280AP59817 542 aaPredicted RBP12.25□□□□□ -0.45
RPE-213ENST00000445268 SPRYD7Q5W111 196 aa12.25□□□□□ -0.45
RPE-213ENST00000445268 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
RPE-213ENST00000445268 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
RPE-213ENST00000445268 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
RPE-213ENST00000445268 ZNF428Q96B54 188 aa12.25□□□□□ -0.45
RPE-213ENST00000445268 UTP14AQ9BVJ6 771 aaKnown RBP12.25□□□□□ -0.45
RPE-213ENST00000445268 NSFL1CQ9UNZ2 370 aaKnown RBP12.25□□□□□ -0.45
RPE-213ENST00000445268 PTCH2Q9Y6C5 1203 aa12.25□□□□□ -0.45
RPE-213ENST00000445268 GPSM2P81274 684 aa12.24□□□□□ -0.45
RPE-213ENST00000445268 TCIRG1Q13488 830 aa12.24□□□□□ -0.45
RPE-213ENST00000445268 SLC10A5Q5PT55 438 aa12.24□□□□□ -0.45
RPE-213ENST00000445268 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
RPE-213ENST00000445268 DLG5Q8TDM6 1919 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 WTIPA6NIX2 430 aaPredicted RBP12.23□□□□□ -0.45
RPE-213ENST00000445268 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 CRHR2Q13324 411 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 SLC9C1Q4G0N8 1177 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 PARP10Q53GL7 1025 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
RPE-213ENST00000445268 DPF3Q92784 378 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 SHISA4Q96DD7 197 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 MYOZ2Q9NPC6 264 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 KNSTRNQ9Y448 316 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 VCANP13611 3396 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 OTOFQ9HC10 1997 aa12.23□□□□□ -0.45
RPE-213ENST00000445268 PRKAR2BP31323 418 aa12.22□□□□□ -0.45
RPE-213ENST00000445268 NBPF9Q3BBW0 867 aa12.22□□□□□ -0.45
RPE-213ENST00000445268 CELF1Q92879 486 aaKnown RBP12.22□□□□□ -0.45
RPE-213ENST00000445268 ALPK3Q96L96 1907 aa12.21□□□□□ -0.45
RPE-213ENST00000445268 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.45
RPE-213ENST00000445268 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
RPE-213ENST00000445268 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
RPE-213ENST00000445268 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
RPE-213ENST00000445268 NF2P35240 595 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 SP3Q02447 781 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 Q7L0L9 218 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 CLMNQ96JQ2 1002 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 GMLQ99445 158 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 ANGEL1Q9UNK9 670 aaKnown RBP12.2□□□□□ -0.46
RPE-213ENST00000445268 SSC5DA1L4H1 1573 aa12.2□□□□□ -0.46
RPE-213ENST00000445268 USP17L8P0C7I0 530 aa12.19□□□□□ -0.46
RPE-213ENST00000445268 LDLRAD1Q5T700 205 aa12.19□□□□□ -0.46
RPE-213ENST00000445268 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
RPE-213ENST00000445268 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
RPE-213ENST00000445268 RTF1Q92541 710 aaKnown RBP12.19□□□□□ -0.46
RPE-213ENST00000445268 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
RPE-213ENST00000445268 EYA3Q99504 573 aa12.19□□□□□ -0.46
RPE-213ENST00000445268 RSPH6AQ9H0K4 717 aa12.19□□□□□ -0.46
RPE-213ENST00000445268 SASH1O94885 1247 aa12.18□□□□□ -0.46
RPE-213ENST00000445268 ANXA1P04083 346 aa12.18□□□□□ -0.46
RPE-213ENST00000445268 NLRP10Q86W26 655 aa12.18□□□□□ -0.46
RPE-213ENST00000445268 SPTBN5Q9NRC6 3674 aaKnown RBP12.17□□□□□ -0.46
RPE-213ENST00000445268 ECM29Q5VYK3 1845 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 SPEF2Q9C093 1822 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 G3V3G9 751 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
RPE-213ENST00000445268 UFL1O94874 794 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 GJA5P36382 358 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 PROSER3Q2NL68 480 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 CC2D1BQ5T0F9 858 aaKnown RBP12.17□□□□□ -0.46
RPE-213ENST00000445268 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
RPE-213ENST00000445268 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
RPE-213ENST00000445268 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
RPE-213ENST00000445268 WNT10BO00744 389 aa12.16□□□□□ -0.46
RPE-213ENST00000445268 MTFR1Q15390 333 aa12.16□□□□□ -0.46
RPE-213ENST00000445268 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
RPE-213ENST00000445268 ZC3H12CQ9C0D7 883 aaKnown RBP12.16□□□□□ -0.46
RPE-213ENST00000445268 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.46
RPE-213ENST00000445268 INHBEP58166 350 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms