RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CAVIN4Q5BKX8 364 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 MACROD2A1Z1Q3 448 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 TMEM266Q2M3C6 531 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 DDX12PQ92771 950 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 ZNF76P36508 570 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 MAP3K12Q12852 859 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 RMND1Q9NWS8 449 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 CCDC194A0A1B0GVG4 234 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 IFNL2Q8IZJ0 200 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 CCDC82Q8N4S0 544 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 CCDC85AQ96PX6 553 aaPredicted RBP21.23■□□□□ 0.99
SHANK3-203ENST00000445220 A2MP01023 1474 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 KRT83P78385 493 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 B4GALNT4Q76KP1 1039 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 ABCF2Q9UG63 623 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 PUF60Q9UHX1 559 aaKnown RBP21.23■□□□□ 0.99
SHANK3-203ENST00000445220 UHRF1BP1Q6BDS2 1440 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 IFIT3O14879 490 aaKnown RBP21.23■□□□□ 0.99
SHANK3-203ENST00000445220 KRT86O43790 486 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 LMOD1P29536 600 aaPredicted RBP21.23■□□□□ 0.99
SHANK3-203ENST00000445220 PPP2R3AQ06190 1150 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 CPLX4Q7Z7G2 160 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 TRIM47Q96LD4 638 aa21.23■□□□□ 0.99
SHANK3-203ENST00000445220 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
SHANK3-203ENST00000445220 POTEDQ86YR6 584 aa21.22■□□□□ 0.99
SHANK3-203ENST00000445220 TTC14Q96N46 770 aa21.22■□□□□ 0.99
SHANK3-203ENST00000445220 SEC63Q9UGP8 760 aaKnown RBP21.22■□□□□ 0.99
SHANK3-203ENST00000445220 RHOXF2BP0C7M4 288 aa21.22■□□□□ 0.99
SHANK3-203ENST00000445220 ZNF445P59923 1031 aa21.22■□□□□ 0.99
SHANK3-203ENST00000445220 RHOXF2Q9BQY4 288 aa21.22■□□□□ 0.99
SHANK3-203ENST00000445220 POLR3AO14802 1390 aaPredicted RBP21.22■□□□□ 0.99
SHANK3-203ENST00000445220 A0A087WZG4 1122 aa21.22■□□□□ 0.99
SHANK3-203ENST00000445220 SELENOOQ9BVL4 669 aa21.21■□□□□ 0.99
SHANK3-203ENST00000445220 A0A1W2PRG0 241 aa21.21■□□□□ 0.99
SHANK3-203ENST00000445220 NLRP5P59047 1200 aa21.21■□□□□ 0.99
SHANK3-203ENST00000445220 RNF41Q9H4P4 317 aaPredicted RBP21.21■□□□□ 0.99
SHANK3-203ENST00000445220 SLC5A1P13866 664 aa21.21■□□□□ 0.99
SHANK3-203ENST00000445220 USP5P45974 858 aa21.21■□□□□ 0.99
SHANK3-203ENST00000445220 DAAM2Q86T65 1068 aa21.21■□□□□ 0.99
SHANK3-203ENST00000445220 TCP11L1Q9NUJ3 509 aa21.21■□□□□ 0.99
SHANK3-203ENST00000445220 AFAP1L1Q8TED9 768 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 UBA5Q9GZZ9 404 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 VAV2P52735 878 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 TSHZ3Q63HK5 1081 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 KRT28Q7Z3Y7 464 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 BRF1Q92994 677 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 ANKRD18BA2A2Z9 1011 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 PDE1AP54750 535 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 SARNPP82979 210 aaKnown RBP21.2■□□□□ 0.98
SHANK3-203ENST00000445220 IQCA1Q86XH1 822 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 DRC1Q96MC2 740 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 HOMER2Q9NSB8 354 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 ZNF518AQ6AHZ1 1483 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 VGLL3A8MV65 326 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 ZNF569Q5MCW4 686 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 IFNKQ9P0W0 207 aa21.2■□□□□ 0.98
SHANK3-203ENST00000445220 SYCP2Q9BX26 1530 aa21.19■□□□□ 0.98
SHANK3-203ENST00000445220 KARSQ15046 597 aaKnown RBP21.19■□□□□ 0.98
SHANK3-203ENST00000445220 DNAJC21Q5F1R6 531 aaKnown RBP21.19■□□□□ 0.98
SHANK3-203ENST00000445220 ZGPATQ8N5A5 531 aaKnown RBP21.19■□□□□ 0.98
SHANK3-203ENST00000445220 UBA7P41226 1012 aa21.19■□□□□ 0.98
SHANK3-203ENST00000445220 KIF5AQ12840 1032 aa21.19■□□□□ 0.98
SHANK3-203ENST00000445220 RRAGBQ5VZM2 374 aa21.19■□□□□ 0.98
SHANK3-203ENST00000445220 RTL1A6NKG5 1358 aa21.19■□□□□ 0.98
SHANK3-203ENST00000445220 MINDY4BA8MYZ0 360 aa21.19■□□□□ 0.98
SHANK3-203ENST00000445220 HSP90AA4PQ58FG1 418 aa21.19■□□□□ 0.98
SHANK3-203ENST00000445220 CALML4Q96GE6 196 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 C8orf37Q96NL8 207 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 SEC24BO95487 1268 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 CETN1Q12798 172 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 TRMT112Q9UI30 125 aaKnown RBP21.18■□□□□ 0.98
SHANK3-203ENST00000445220 MAP3K2Q9Y2U5 619 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 CTTNBP2Q8WZ74 1663 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 INPP5BP32019 993 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 METAP2P50579 478 aaKnown RBP eCLIP21.18■□□□□ 0.98
SHANK3-203ENST00000445220 LZTFL1Q9NQ48 299 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 RASAL2Q9UJF2 1139 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 A6NNZ2 444 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 RBM5P52756 815 aaKnown RBP eCLIP21.18■□□□□ 0.988e-6■■■■□ 20.7
SHANK3-203ENST00000445220 TUBB8Q3ZCM7 444 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 BICDL1Q6ZP65 573 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 UHRF1BP1LA0JNW5 1464 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 SHANK2Q9UPX8 1470 aa21.18■□□□□ 0.98
SHANK3-203ENST00000445220 CCDC77Q9BR77 488 aa21.17■□□□□ 0.98
SHANK3-203ENST00000445220 CCDC160A6NGH7 325 aa21.17■□□□□ 0.98
SHANK3-203ENST00000445220 IDEP14735 1019 aa21.17■□□□□ 0.98
SHANK3-203ENST00000445220 CTNNA2P26232 953 aa21.17■□□□□ 0.98
SHANK3-203ENST00000445220 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
SHANK3-203ENST00000445220 BMP15O95972 392 aa21.17■□□□□ 0.98
SHANK3-203ENST00000445220 ZPR1O75312 459 aa21.17■□□□□ 0.98
SHANK3-203ENST00000445220 SAMD15Q9P1V8 674 aa21.17■□□□□ 0.98
SHANK3-203ENST00000445220 NEBLO76041 1014 aa21.16■□□□□ 0.98
SHANK3-203ENST00000445220 CFAP58Q5T655 872 aa21.16■□□□□ 0.98
SHANK3-203ENST00000445220 TTF1Q15361 905 aaPredicted RBP21.16■□□□□ 0.98
SHANK3-203ENST00000445220 PLVAPQ9BX97 442 aa21.16■□□□□ 0.98
SHANK3-203ENST00000445220 LACTBP83111 547 aaPredicted RBP21.16■□□□□ 0.98
SHANK3-203ENST00000445220 ELF2Q15723 593 aa21.16■□□□□ 0.98
SHANK3-203ENST00000445220 TCERG1LQ5VWI1 586 aa21.16■□□□□ 0.98
SHANK3-203ENST00000445220 PPP1R42Q7Z4L9 355 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms