RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 GGA1Q9UJY5 639 aa23.17■■□□□ 1.3
VCX3B-203ENST00000444481 XDHP47989 1333 aa23.16■■□□□ 1.3
VCX3B-203ENST00000444481 RAD17O75943 681 aa23.16■■□□□ 1.3
VCX3B-203ENST00000444481 GMPSP49915 693 aaPredicted RBP23.16■■□□□ 1.3
VCX3B-203ENST00000444481 BEND3Q5T5X7 828 aa23.16■■□□□ 1.3
VCX3B-203ENST00000444481 CNTROBQ8N137 903 aa23.16■■□□□ 1.3
VCX3B-203ENST00000444481 BCL2L13Q9BXK5 485 aa23.16■■□□□ 1.3
VCX3B-203ENST00000444481 BSDC1Q9NW68 430 aaPredicted RBP23.16■■□□□ 1.3
VCX3B-203ENST00000444481 UFL1O94874 794 aa23.15■■□□□ 1.3
VCX3B-203ENST00000444481 DBNDD1Q9H9R9 158 aa23.15■■□□□ 1.3
VCX3B-203ENST00000444481 F6X3S4 739 aa23.14■■□□□ 1.29
VCX3B-203ENST00000444481 CSF1RP07333 972 aa23.14■■□□□ 1.29
VCX3B-203ENST00000444481 ATP2B4P23634 1241 aa23.14■■□□□ 1.29
VCX3B-203ENST00000444481 MAP1SQ66K74 1059 aaPredicted RBP23.14■■□□□ 1.29
VCX3B-203ENST00000444481 ECE2O60344 883 aa23.13■■□□□ 1.29
VCX3B-203ENST00000444481 SLFN5Q08AF3 891 aa23.13■■□□□ 1.29
VCX3B-203ENST00000444481 DPF2Q92785 391 aa23.13■■□□□ 1.29
VCX3B-203ENST00000444481 IGHMBP2P38935 993 aaKnown RBP23.12■■□□□ 1.29
VCX3B-203ENST00000444481 MINPP1Q9UNW1 487 aa23.12■■□□□ 1.29
VCX3B-203ENST00000444481 TMEM88BA6NKF7 163 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 G3V3G9 751 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 H7C1D1 291 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 PSMD14O00487 310 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 ALDH1L1O75891 902 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 ITGA6P23229 1130 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 RPS12P25398 132 aaKnown RBP23.11■■□□□ 1.29
VCX3B-203ENST00000444481 DOK7Q18PE1 504 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 DCAF8Q5TAQ9 597 aa23.11■■□□□ 1.29
VCX3B-203ENST00000444481 CNOT7Q9UIV1 285 aaKnown RBP23.11■■□□□ 1.29
VCX3B-203ENST00000444481 ZC3H15Q8WU90 426 aaKnown RBP23.1■■□□□ 1.29
VCX3B-203ENST00000444481 GPR101Q96P66 508 aaPredicted RBP23.1■■□□□ 1.29
VCX3B-203ENST00000444481 GRM8O00222 908 aa23.09■■□□□ 1.29
VCX3B-203ENST00000444481 MPHOSPH8Q99549 860 aa23.09■■□□□ 1.29
VCX3B-203ENST00000444481 SRCIN1Q9C0H9 1055 aa23.09■■□□□ 1.29
VCX3B-203ENST00000444481 PGAP2Q9UHJ9 254 aa23.09■■□□□ 1.29
VCX3B-203ENST00000444481 FAM161AQ3B820 660 aa23.08■■□□□ 1.29
VCX3B-203ENST00000444481 MRPL50Q8N5N7 158 aaKnown RBP23.08■■□□□ 1.29
VCX3B-203ENST00000444481 ANKRD2Q9GZV1 360 aa23.08■■□□□ 1.29
VCX3B-203ENST00000444481 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.29
VCX3B-203ENST00000444481 PTPRCP08575 1304 aa23.08■■□□□ 1.28
VCX3B-203ENST00000444481 MED23Q9ULK4 1368 aa23.07■■□□□ 1.28
VCX3B-203ENST00000444481 ANKRD18BA2A2Z9 1011 aa23.07■■□□□ 1.28
VCX3B-203ENST00000444481 VIL1P09327 827 aaKnown RBP23.07■■□□□ 1.28
VCX3B-203ENST00000444481 CCT4P50991 539 aaKnown RBP23.07■■□□□ 1.28
VCX3B-203ENST00000444481 FOXO4P98177 505 aa23.07■■□□□ 1.28
VCX3B-203ENST00000444481 SLC4A10Q6U841 1118 aa23.07■■□□□ 1.28
VCX3B-203ENST00000444481 PODNQ7Z5L7 613 aa23.07■■□□□ 1.28
VCX3B-203ENST00000444481 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
VCX3B-203ENST00000444481 LEMD3Q9Y2U8 911 aa23.07■■□□□ 1.28
VCX3B-203ENST00000444481 ZBTB12Q9Y330 459 aaPredicted RBP23.07■■□□□ 1.28
VCX3B-203ENST00000444481 MICALL2Q8IY33 904 aa23.06■■□□□ 1.28
VCX3B-203ENST00000444481 KCNQ5Q9NR82 932 aa23.06■■□□□ 1.28
VCX3B-203ENST00000444481 CT47B1P0C2W7 299 aaPredicted RBP23.05■■□□□ 1.28
VCX3B-203ENST00000444481 IFIT5Q13325 482 aaKnown RBP23.05■■□□□ 1.28
VCX3B-203ENST00000444481 ALDH1L2Q3SY69 923 aa23.05■■□□□ 1.28
VCX3B-203ENST00000444481 CDCA7LQ96GN5 454 aa23.05■■□□□ 1.28
VCX3B-203ENST00000444481 SPEF2Q9C093 1822 aa23.05■■□□□ 1.28
VCX3B-203ENST00000444481 CNTNAP1P78357 1384 aa23.04■■□□□ 1.28
VCX3B-203ENST00000444481 HIRAP54198 1017 aaPredicted RBP23.04■■□□□ 1.28
VCX3B-203ENST00000444481 SSH1Q8WYL5 1049 aa23.04■■□□□ 1.28
VCX3B-203ENST00000444481 MKRN1Q9UHC7 482 aaKnown RBP23.04■■□□□ 1.28
VCX3B-203ENST00000444481 ZNF609O15014 1411 aa23.04■■□□□ 1.28
VCX3B-203ENST00000444481 LMBR1LQ6UX01 489 aa23.03■■□□□ 1.28
VCX3B-203ENST00000444481 AGBL3Q8NEM8 1001 aa23.03■■□□□ 1.28
VCX3B-203ENST00000444481 TRPM4Q8TD43 1214 aa23.03■■□□□ 1.28
VCX3B-203ENST00000444481 SCN9AQ15858 1988 aa23.03■■□□□ 1.28
VCX3B-203ENST00000444481 CHMP3Q9Y3E7 222 aa23.02■■□□□ 1.28
VCX3B-203ENST00000444481 ZNF804BA4D1E1 1349 aa23.02■■□□□ 1.28
VCX3B-203ENST00000444481 UTYO14607 1347 aa23.02■■□□□ 1.28
VCX3B-203ENST00000444481 RASSF10A6NK89 507 aa23.01■■□□□ 1.27
VCX3B-203ENST00000444481 CHRNDQ07001 517 aa23.01■■□□□ 1.27
VCX3B-203ENST00000444481 CCDC57Q2TAC2 916 aa23.01■■□□□ 1.27
VCX3B-203ENST00000444481 RSBN1LQ6PCB5 846 aaPredicted RBP23.01■■□□□ 1.27
VCX3B-203ENST00000444481 CDC37L1Q7L3B6 337 aa23.01■■□□□ 1.27
VCX3B-203ENST00000444481 COA1Q9GZY4 146 aa23.01■■□□□ 1.27
VCX3B-203ENST00000444481 PCNTO95613 3336 aa23.01■■□□□ 1.27
VCX3B-203ENST00000444481 PSME4Q14997 1843 aa23.01■■□□□ 1.27
VCX3B-203ENST00000444481 SHTN1A0MZ66 631 aa23■■□□□ 1.27
VCX3B-203ENST00000444481 USP17L3A6NCW0 530 aa23■■□□□ 1.27
VCX3B-203ENST00000444481 USP17L4A6NCW7 530 aa23■■□□□ 1.27
VCX3B-203ENST00000444481 WTIPA6NIX2 430 aaPredicted RBP23■■□□□ 1.27
VCX3B-203ENST00000444481 EPHA10Q5JZY3 1008 aa23■■□□□ 1.27
VCX3B-203ENST00000444481 USP17L1Q7RTZ2 530 aa23■■□□□ 1.27
VCX3B-203ENST00000444481 SAMD7Q7Z3H4 446 aa23■■□□□ 1.27
VCX3B-203ENST00000444481 TRPM7Q96QT4 1865 aa22.99■■□□□ 1.27
VCX3B-203ENST00000444481 DEFB115Q30KQ5 88 aa22.99■■□□□ 1.27
VCX3B-203ENST00000444481 TRAF5O00463 557 aa22.98■■□□□ 1.27
VCX3B-203ENST00000444481 KCNJ4P48050 445 aa22.98■■□□□ 1.27
VCX3B-203ENST00000444481 TBC1D10BQ4KMP7 808 aaPredicted RBP22.98■■□□□ 1.27
VCX3B-203ENST00000444481 TAF7LQ5H9L4 462 aa22.98■■□□□ 1.27
VCX3B-203ENST00000444481 ABT1Q9ULW3 272 aaKnown RBP22.98■■□□□ 1.27
VCX3B-203ENST00000444481 NBPF7P0C2Y1 421 aaPredicted RBP22.97■■□□□ 1.27
VCX3B-203ENST00000444481 ZNF280AP59817 542 aaPredicted RBP22.97■■□□□ 1.27
VCX3B-203ENST00000444481 CST9Q5W186 159 aa22.97■■□□□ 1.27
VCX3B-203ENST00000444481 GMLQ99445 158 aa22.97■■□□□ 1.27
VCX3B-203ENST00000444481 GLIS2Q9BZE0 524 aaPredicted RBP22.97■■□□□ 1.27
VCX3B-203ENST00000444481 SMC4Q9NTJ3 1288 aa22.97■■□□□ 1.27
VCX3B-203ENST00000444481 VEGFBP49765 207 aa22.96■■□□□ 1.27
VCX3B-203ENST00000444481 FMR1Q06787 632 aaKnown RBP eCLIP22.96■■□□□ 1.27
VCX3B-203ENST00000444481 KIF4BQ2VIQ3 1234 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms