RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SP3Q02447 781 aa19.33■□□□□ 0.68
SYNCRIP-203ENST00000444272 PTPN12Q05209 780 aaKnown RBP19.33■□□□□ 0.68
SYNCRIP-203ENST00000444272 SUSD4Q5VX71 490 aa19.33■□□□□ 0.68
SYNCRIP-203ENST00000444272 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
SYNCRIP-203ENST00000444272 SHISA4Q96DD7 197 aa19.33■□□□□ 0.68
SYNCRIP-203ENST00000444272 CRHR2Q13324 411 aa19.32■□□□□ 0.68
SYNCRIP-203ENST00000444272 NLRP3Q96P20 1036 aa19.32■□□□□ 0.68
SYNCRIP-203ENST00000444272 TAF1P21675 1872 aa19.31■□□□□ 0.68
SYNCRIP-203ENST00000444272 MANSC4A6NHS7 340 aaPredicted RBP19.31■□□□□ 0.68
SYNCRIP-203ENST00000444272 BBOX1O75936 387 aa19.31■□□□□ 0.68
SYNCRIP-203ENST00000444272 PLA2G5P39877 138 aa19.31■□□□□ 0.68
SYNCRIP-203ENST00000444272 WASHC4Q2M389 1173 aa19.31■□□□□ 0.68
SYNCRIP-203ENST00000444272 SH3TC2Q8TF17 1288 aa19.31■□□□□ 0.68
SYNCRIP-203ENST00000444272 STAP2Q9UGK3 403 aa19.31■□□□□ 0.68
SYNCRIP-203ENST00000444272 RIMBP2O15034 1052 aa19.3■□□□□ 0.68
SYNCRIP-203ENST00000444272 ECE2O60344 883 aa19.3■□□□□ 0.68
SYNCRIP-203ENST00000444272 INHBEP58166 350 aa19.3■□□□□ 0.68
SYNCRIP-203ENST00000444272 BTBD11A6QL63 1104 aa19.29■□□□□ 0.68
SYNCRIP-203ENST00000444272 NTSR2O95665 410 aa19.29■□□□□ 0.68
SYNCRIP-203ENST00000444272 PRKG1Q13976 671 aa19.29■□□□□ 0.68
SYNCRIP-203ENST00000444272 SCN9AQ15858 1988 aa19.29■□□□□ 0.68
SYNCRIP-203ENST00000444272 PRUNE2Q8WUY3 3088 aa19.29■□□□□ 0.68
SYNCRIP-203ENST00000444272 LAMB2P55268 1798 aa19.29■□□□□ 0.68
SYNCRIP-203ENST00000444272 NF2P35240 595 aa19.28■□□□□ 0.68
SYNCRIP-203ENST00000444272 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
SYNCRIP-203ENST00000444272 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.28■□□□□ 0.68
SYNCRIP-203ENST00000444272 LAMB1P07942 1786 aa19.28■□□□□ 0.68
SYNCRIP-203ENST00000444272 SNRPA1P09661 255 aaKnown RBP19.27■□□□□ 0.68
SYNCRIP-203ENST00000444272 ZNF280AP59817 542 aaPredicted RBP19.27■□□□□ 0.68
SYNCRIP-203ENST00000444272 NGEFQ8N5V2 710 aa19.27■□□□□ 0.68
SYNCRIP-203ENST00000444272 FAM122AQ96E09 287 aa19.27■□□□□ 0.68
SYNCRIP-203ENST00000444272 LRRC37AA6NMS7 1700 aa19.27■□□□□ 0.68
SYNCRIP-203ENST00000444272 ARMC9Q7Z3E5 817 aa19.26■□□□□ 0.67
SYNCRIP-203ENST00000444272 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
SYNCRIP-203ENST00000444272 GNAT3A8MTJ3 354 aa19.25■□□□□ 0.67
SYNCRIP-203ENST00000444272 ERVV-1B6SEH8 477 aa19.25■□□□□ 0.67
SYNCRIP-203ENST00000444272 VIL1P09327 827 aaKnown RBP19.25■□□□□ 0.67
SYNCRIP-203ENST00000444272 UBE2Q1Q7Z7E8 422 aa19.25■□□□□ 0.67
SYNCRIP-203ENST00000444272 ANKRD36CQ5JPF3 1778 aa19.24■□□□□ 0.67
SYNCRIP-203ENST00000444272 MYOZ2Q9NPC6 264 aa19.24■□□□□ 0.67
SYNCRIP-203ENST00000444272 MAP3K15Q6ZN16 1313 aa19.24■□□□□ 0.67
SYNCRIP-203ENST00000444272 ARHGEF6Q15052 776 aa19.23■□□□□ 0.67
SYNCRIP-203ENST00000444272 MTFR1Q15390 333 aa19.23■□□□□ 0.67
SYNCRIP-203ENST00000444272 LDLRAD1Q5T700 205 aa19.23■□□□□ 0.67
SYNCRIP-203ENST00000444272 RPTORQ8N122 1335 aa19.23■□□□□ 0.67
SYNCRIP-203ENST00000444272 TTC28Q96AY4 2481 aa19.23■□□□□ 0.67
SYNCRIP-203ENST00000444272 GRAPQ13588 217 aa19.22■□□□□ 0.67
SYNCRIP-203ENST00000444272 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
SYNCRIP-203ENST00000444272 GRAPLQ8TC17 118 aaPredicted RBP19.22■□□□□ 0.67
SYNCRIP-203ENST00000444272 ANGEL1Q9UNK9 670 aaKnown RBP19.22■□□□□ 0.67
SYNCRIP-203ENST00000444272 NSFL1CQ9UNZ2 370 aaKnown RBP19.22■□□□□ 0.67
SYNCRIP-203ENST00000444272 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 C6orf229H3BNL8 230 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 EVI5O60447 810 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 ZBTB48P10074 688 aaPredicted RBP19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 HOXD11P31277 338 aaPredicted RBP19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 KIF6Q6ZMV9 814 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 MORC1Q86VD1 984 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 ZNF34Q8IZ26 560 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 WNK4Q96J92 1243 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 ZBTB3Q9H5J0 574 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 FZD1Q9UP38 647 aa19.21■□□□□ 0.67
SYNCRIP-203ENST00000444272 TTLL7Q6ZT98 887 aa19.2■□□□□ 0.66
SYNCRIP-203ENST00000444272 NKX2-3Q8TAU0 364 aa19.2■□□□□ 0.66
SYNCRIP-203ENST00000444272 SLC10A4Q96EP9 437 aa19.2■□□□□ 0.66
SYNCRIP-203ENST00000444272 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
SYNCRIP-203ENST00000444272 LAMA2P24043 3122 aaKnown RBP19.2■□□□□ 0.66
SYNCRIP-203ENST00000444272 CEMIPQ8WUJ3 1361 aa19.19■□□□□ 0.66
SYNCRIP-203ENST00000444272 BCAMP50895 628 aa19.19■□□□□ 0.66
SYNCRIP-203ENST00000444272 NBPF9Q3BBW0 867 aa19.19■□□□□ 0.66
SYNCRIP-203ENST00000444272 LRIT3Q3SXY7 679 aa19.19■□□□□ 0.66
SYNCRIP-203ENST00000444272 SLC10A5Q5PT55 438 aa19.19■□□□□ 0.66
SYNCRIP-203ENST00000444272 RSBN1LQ6PCB5 846 aaPredicted RBP19.19■□□□□ 0.66
SYNCRIP-203ENST00000444272 AGBL3Q8NEM8 1001 aa19.19■□□□□ 0.66
SYNCRIP-203ENST00000444272 USP17L8P0C7I0 530 aa19.18■□□□□ 0.66
SYNCRIP-203ENST00000444272 PSME4Q14997 1843 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 BMP8BP34820 402 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 GJA8P48165 433 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 TMC4Q7Z404 712 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 NECTIN2Q92692 538 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 EYA3Q99504 573 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 PTPN18Q99952 460 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 GDF15Q99988 308 aa19.17■□□□□ 0.66
SYNCRIP-203ENST00000444272 FARP2O94887 1054 aaPredicted RBP19.16■□□□□ 0.66
SYNCRIP-203ENST00000444272 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
SYNCRIP-203ENST00000444272 CLMNQ96JQ2 1002 aa19.16■□□□□ 0.66
SYNCRIP-203ENST00000444272 PARP10Q53GL7 1025 aa19.15■□□□□ 0.66
SYNCRIP-203ENST00000444272 GUCD1Q96NT3 240 aa19.15■□□□□ 0.66
SYNCRIP-203ENST00000444272 POLR3GLQ9BT43 218 aa19.15■□□□□ 0.66
SYNCRIP-203ENST00000444272 UTP14AQ9BVJ6 771 aaKnown RBP19.15■□□□□ 0.66
SYNCRIP-203ENST00000444272 G3V3G9 751 aa19.14■□□□□ 0.65
SYNCRIP-203ENST00000444272 HCLS1P14317 486 aaPredicted RBP19.14■□□□□ 0.65
SYNCRIP-203ENST00000444272 GPSM2P81274 684 aa19.14■□□□□ 0.65
SYNCRIP-203ENST00000444272 DCAF8Q5TAQ9 597 aa19.14■□□□□ 0.65
SYNCRIP-203ENST00000444272 ARHGAP39Q9C0H5 1083 aa19.14■□□□□ 0.65
SYNCRIP-203ENST00000444272 GMLQ99445 158 aa19.13■□□□□ 0.65
SYNCRIP-203ENST00000444272 ALPK3Q96L96 1907 aa19.13■□□□□ 0.65
SYNCRIP-203ENST00000444272 IRS2Q9Y4H2 1338 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms