RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 HAND2P61296 217 aa16.61■□□□□ 0.25
SMARCA4-204ENST00000444061 CPS1P31327 1500 aa16.61■□□□□ 0.25
SMARCA4-204ENST00000444061 GOLGA6L3A6NEY3 463 aa16.61■□□□□ 0.25
SMARCA4-204ENST00000444061 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
SMARCA4-204ENST00000444061 KCNQ2O43526 872 aa16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 LPIN2Q92539 896 aa16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 MROH5Q6ZUA9 1318 aa16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 MAGEB6P1A0A0J9YX57 407 aa16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 SEC63Q9UGP8 760 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 SSH2Q76I76 1423 aa16.6■□□□□ 0.25
SMARCA4-204ENST00000444061 WASF1Q92558 559 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 PES1O00541 588 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 PPIP5K2O43314 1243 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 SDSP20132 328 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 BEND3Q5T5X7 828 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 SPATA31A5Q5VU36 1347 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 SPATA31A7Q8IWB4 1347 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 WDR78Q5VTH9 848 aa16.59■□□□□ 0.25
SMARCA4-204ENST00000444061 ZNF853P0CG23 659 aa16.58■□□□□ 0.25
SMARCA4-204ENST00000444061 MCMDC2Q4G0Z9 681 aa16.58■□□□□ 0.25
SMARCA4-204ENST00000444061 USP44Q9H0E7 712 aa16.58■□□□□ 0.25
SMARCA4-204ENST00000444061 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.25
SMARCA4-204ENST00000444061 ADGRB1O14514 1584 aa16.58■□□□□ 0.25
SMARCA4-204ENST00000444061 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 MAGEB6Q8N7X4 407 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 XAGE2Q96GT9 111 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 SRP68Q9UHB9 627 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 SKOR2Q2VWA4 1001 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 BCORL1Q5H9F3 1711 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 MYO3AQ8NEV4 1616 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 GSE1Q14687 1217 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 WDR66Q8TBY9 1149 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 DBNDD2Q9BQY9 259 aa16.58■□□□□ 0.24
SMARCA4-204ENST00000444061 K7ELQ4 463 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 EN1Q05925 392 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 ZNF396Q96N95 335 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 TNNI2P48788 182 aa16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 RNF113AO15541 343 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-204ENST00000444061 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 BECN2A8MW95 431 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 MMP10P09238 476 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 NCOA7Q8NI08 942 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 MAST3O60307 1309 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 GNAT2P19087 354 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 STK38Q15208 465 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 HMG20BQ9P0W2 317 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 STX8Q9UNK0 236 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 TXLNAP40222 546 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 KIAA1210Q9ULL0 1709 aa16.56■□□□□ 0.24
SMARCA4-204ENST00000444061 ADRA2BP18089 450 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 ZNF76P36508 570 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 MCM9Q9NXL9 1143 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 ABCC4O15439 1325 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 JMYQ8N9B5 988 aa16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 MARCH10Q8NA82 808 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-204ENST00000444061 ATP2B4P23634 1241 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 PPP4R3BQ5MIZ7 849 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 NEURL4Q96JN8 1562 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 TSPY3P0CV98 308 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 TSPY8P0CW00 308 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 ESR2Q92731 530 aa16.54■□□□□ 0.24
SMARCA4-204ENST00000444061 GOLGA6L19H0YKK7 550 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 TPM2P07951 284 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 GRM1Q13255 1194 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 GOLGA8AA7E2F4 631 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 GOLGA8BA8MQT2 603 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 KIF5BP33176 963 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 NEK1Q96PY6 1258 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 TBC1D22AQ8WUA7 517 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 KRT23Q9C075 422 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 NARFQ9UHQ1 456 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
SMARCA4-204ENST00000444061 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 TEX11Q8IYF3 940 aa16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 CCDC178Q5BJE1 867 aa16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 SDF4Q9BRK5 362 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms