RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 ZNF609O15014 1411 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 PFKFB2O60825 505 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 LRRC8AQ8IWT6 810 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 RCOR1Q9UKL0 485 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-206ENST00000443700 SH3TC1Q8TE82 1336 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 BECN2A8MW95 431 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 KIF2AO00139 706 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-206ENST00000443700 KINO60870 393 aaKnown RBP18.12■□□□□ 0.49
AP1S3-206ENST00000443700 COL9A3Q14050 684 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-206ENST00000443700 MCMDC2Q4G0Z9 681 aa18.12■□□□□ 0.49
AP1S3-206ENST00000443700 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
AP1S3-206ENST00000443700 IGKV5-2P06315 115 aa18.11■□□□□ 0.49
AP1S3-206ENST00000443700 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
AP1S3-206ENST00000443700 FGD1P98174 961 aa18.11■□□□□ 0.49
AP1S3-206ENST00000443700 DHX8Q14562 1220 aaKnown RBP18.11■□□□□ 0.49
AP1S3-206ENST00000443700 TNNI3KQ59H18 835 aa18.11■□□□□ 0.49
AP1S3-206ENST00000443700 CCAR1Q8IX12 1150 aaKnown RBP18.11■□□□□ 0.49
AP1S3-206ENST00000443700 NAT10Q9H0A0 1025 aaKnown RBP18.11■□□□□ 0.49
AP1S3-206ENST00000443700 FPGT-TNNI3KV9GXZ4 949 aa18.11■□□□□ 0.49
AP1S3-206ENST00000443700 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 GSDMDP57764 484 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 GABPB1Q06547 395 aaPredicted RBP18.1■□□□□ 0.49
AP1S3-206ENST00000443700 AIMP1Q12904 312 aaKnown RBP18.1■□□□□ 0.49
AP1S3-206ENST00000443700 GCKRQ14397 625 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 CCDC144BQ3MJ40 725 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 CCDC144CPQ8IYA2 1237 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 CEP57L1Q8IYX8 460 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 KCND1Q9NSA2 647 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 CTNNA3Q9UI47 895 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 ZHX1Q9UKY1 873 aaPredicted RBP18.1■□□□□ 0.49
AP1S3-206ENST00000443700 ARFGEF2Q9Y6D5 1785 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
AP1S3-206ENST00000443700 ABCC6O95255 1503 aa18.09■□□□□ 0.49
AP1S3-206ENST00000443700 FAM160A1Q05DH4 1040 aa18.09■□□□□ 0.49
AP1S3-206ENST00000443700 SCRN1Q12765 414 aa18.09■□□□□ 0.49
AP1S3-206ENST00000443700 C11orf57Q6ZUT1 292 aaPredicted RBP18.09■□□□□ 0.49
AP1S3-206ENST00000443700 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
AP1S3-206ENST00000443700 DBNLQ9UJU6 430 aaKnown RBP18.09■□□□□ 0.49
AP1S3-206ENST00000443700 PDIA6Q15084 440 aa18.09■□□□□ 0.49
AP1S3-206ENST00000443700 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
AP1S3-206ENST00000443700 NSUN7Q8NE18 718 aaKnown RBP18.09■□□□□ 0.49
AP1S3-206ENST00000443700 HAUS7Q99871 368 aa18.09■□□□□ 0.49
AP1S3-206ENST00000443700 CYP21A2P08686 494 aa18.08■□□□□ 0.48
AP1S3-206ENST00000443700 PSME1Q06323 249 aa18.08■□□□□ 0.48
AP1S3-206ENST00000443700 ZNF397Q8NF99 534 aaPredicted RBP18.08■□□□□ 0.48
AP1S3-206ENST00000443700 DDX11Q96FC9 970 aa18.08■□□□□ 0.48
AP1S3-206ENST00000443700 PTPDC1A2A3K4 754 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 PRAMEF22A3QJZ6 481 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 ADD1P35611 737 aaKnown RBP18.07■□□□□ 0.48
AP1S3-206ENST00000443700 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 DHX32Q7L7V1 743 aaKnown RBP18.07■□□□□ 0.48
AP1S3-206ENST00000443700 IMPACTQ9P2X3 320 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 DNAJC2Q99543 621 aaKnown RBP18.07■□□□□ 0.48
AP1S3-206ENST00000443700 MYD88Q99836 296 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 DSCC1Q9BVC3 393 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 HELLSQ9NRZ9 838 aa18.07■□□□□ 0.48
AP1S3-206ENST00000443700 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
AP1S3-206ENST00000443700 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
AP1S3-206ENST00000443700 SKILP12757 684 aa18.06■□□□□ 0.48
AP1S3-206ENST00000443700 RFX5P48382 616 aaPredicted RBP18.06■□□□□ 0.48
AP1S3-206ENST00000443700 TFCP2Q12800 502 aa18.06■□□□□ 0.48
AP1S3-206ENST00000443700 RABL6Q3YEC7 729 aaPredicted RBP18.06■□□□□ 0.48
AP1S3-206ENST00000443700 KBTBD3Q8NAB2 608 aa18.06■□□□□ 0.48
AP1S3-206ENST00000443700 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
AP1S3-206ENST00000443700 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
AP1S3-206ENST00000443700 ERO1AQ96HE7 468 aa18.06■□□□□ 0.48
AP1S3-206ENST00000443700 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
AP1S3-206ENST00000443700 PTPN12Q05209 780 aaKnown RBP18.05■□□□□ 0.48
AP1S3-206ENST00000443700 SNW1Q13573 536 aaKnown RBP18.05■□□□□ 0.48
AP1S3-206ENST00000443700 SLFNL1Q499Z3 407 aa18.05■□□□□ 0.48
AP1S3-206ENST00000443700 DHX40Q8IX18 779 aaKnown RBP18.05■□□□□ 0.48
AP1S3-206ENST00000443700 ENGASEQ8NFI3 743 aa18.05■□□□□ 0.48
AP1S3-206ENST00000443700 ZNF592Q92610 1267 aa18.05■□□□□ 0.48
AP1S3-206ENST00000443700 GOLPH3LQ9H4A5 285 aa18.05■□□□□ 0.48
AP1S3-206ENST00000443700 SALL1Q9NSC2 1324 aa18.05■□□□□ 0.48
AP1S3-206ENST00000443700 NRDCO43847 1150 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 CCZ1BP86790 482 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 CCZ1P86791 482 aaPredicted RBP18.04■□□□□ 0.48
AP1S3-206ENST00000443700 TAF3Q5VWG9 929 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 FSIP1Q8NA03 581 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 CCDC150Q8NCX0 1101 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 KIF18AQ8NI77 898 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 XAGE3Q8WTP9 111 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 MRPS27Q92552 414 aaKnown RBP18.04■□□□□ 0.48
AP1S3-206ENST00000443700 MORC2Q9Y6X9 1032 aaPredicted RBP18.04■□□□□ 0.48
AP1S3-206ENST00000443700 TUBB4AP04350 444 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 TPM4P67936 248 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 CEBPZQ03701 1054 aaKnown RBP18.04■□□□□ 0.48
AP1S3-206ENST00000443700 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
AP1S3-206ENST00000443700 EPHA10Q5JZY3 1008 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 CCDC129Q6ZRS4 1044 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 ZNF274Q96GC6 653 aaPredicted RBP18.04■□□□□ 0.48
AP1S3-206ENST00000443700 USP28Q96RU2 1077 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms