RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 EYA3Q99504 573 aa27.1■■□□□ 1.93
POLR2J3-202ENST00000443430 AKAP11Q9UKA4 1901 aa27.1■■□□□ 1.93
POLR2J3-202ENST00000443430 TBC1D16Q8TBP0 767 aa27.09■■□□□ 1.93
POLR2J3-202ENST00000443430 RNF186Q9NXI6 227 aa27.09■■□□□ 1.93
POLR2J3-202ENST00000443430 KIF4BQ2VIQ3 1234 aa27.08■■□□□ 1.93
POLR2J3-202ENST00000443430 RTL5Q5HYW3 569 aaPredicted RBP27.08■■□□□ 1.93
POLR2J3-202ENST00000443430 TRPA1O75762 1119 aa27.07■■□□□ 1.92
POLR2J3-202ENST00000443430 VIL1P09327 827 aaKnown RBP27.07■■□□□ 1.92
POLR2J3-202ENST00000443430 RPS8P62241 208 aaKnown RBP27.07■■□□□ 1.92
POLR2J3-202ENST00000443430 NEUROD2Q15784 382 aa27.07■■□□□ 1.92
POLR2J3-202ENST00000443430 HDGFL1Q5TGJ6 251 aa27.07■■□□□ 1.92
POLR2J3-202ENST00000443430 GGA3Q9NZ52 723 aa27.06■■□□□ 1.92
POLR2J3-202ENST00000443430 LAS1LQ9Y4W2 734 aaKnown RBP27.06■■□□□ 1.92
POLR2J3-202ENST00000443430 IRS4O14654 1257 aaPredicted RBP27.05■■□□□ 1.92
POLR2J3-202ENST00000443430 SLC10A3P09131 477 aa27.05■■□□□ 1.92
POLR2J3-202ENST00000443430 SULF1Q8IWU6 871 aa27.05■■□□□ 1.92
POLR2J3-202ENST00000443430 CSRNP1Q96S65 589 aa27.05■■□□□ 1.92
POLR2J3-202ENST00000443430 DBF4Q9UBU7 674 aaPredicted RBP27.05■■□□□ 1.92
POLR2J3-202ENST00000443430 ASTN2O75129 1339 aaPredicted RBP27.05■■□□□ 1.92
POLR2J3-202ENST00000443430 HOXB7P09629 217 aa27.04■■□□□ 1.92
POLR2J3-202ENST00000443430 TRIM28Q13263 835 aaKnown RBP27.04■■□□□ 1.92
POLR2J3-202ENST00000443430 ZC3H12CQ9C0D7 883 aaKnown RBP27.04■■□□□ 1.92
POLR2J3-202ENST00000443430 PODXL2Q9NZ53 605 aa27.04■■□□□ 1.92
POLR2J3-202ENST00000443430 TRIM35Q9UPQ4 493 aa27.04■■□□□ 1.92
POLR2J3-202ENST00000443430 CCDC146Q8IYE0 955 aa27.03■■□□□ 1.92
POLR2J3-202ENST00000443430 CDCA5Q96FF9 252 aa27.03■■□□□ 1.92
POLR2J3-202ENST00000443430 PCDH10Q9P2E7 1040 aa27.03■■□□□ 1.92
POLR2J3-202ENST00000443430 SOX10P56693 466 aa27.01■■□□□ 1.91
POLR2J3-202ENST00000443430 SEC31BQ9NQW1 1179 aa27.01■■□□□ 1.91
POLR2J3-202ENST00000443430 HYPKQ9NX55 129 aa27.01■■□□□ 1.91
POLR2J3-202ENST00000443430 UFL1O94874 794 aa27■■□□□ 1.91
POLR2J3-202ENST00000443430 ZNF280AP59817 542 aaPredicted RBP27■■□□□ 1.91
POLR2J3-202ENST00000443430 RALBP1Q15311 655 aa27■■□□□ 1.91
POLR2J3-202ENST00000443430 SCARF1Q14162 830 aa26.99■■□□□ 1.91
POLR2J3-202ENST00000443430 G3V3G9 751 aa26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 DCAF8Q5TAQ9 597 aa26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 ANGEL2Q5VTE6 544 aaKnown RBP26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 RASAL3Q86YV0 1011 aa26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 ZBTB38Q8NAP3 1195 aaPredicted RBP26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 AGBL3Q8NEM8 1001 aa26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 ANKIB1Q9P2G1 1089 aa26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 GGA1Q9UJY5 639 aa26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 ZNF609O15014 1411 aa26.98■■□□□ 1.91
POLR2J3-202ENST00000443430 PSME4Q14997 1843 aa26.97■■□□□ 1.91
POLR2J3-202ENST00000443430 DUSP27Q5VZP5 1158 aa26.97■■□□□ 1.91
POLR2J3-202ENST00000443430 RSBN1LQ6PCB5 846 aaPredicted RBP26.97■■□□□ 1.91
POLR2J3-202ENST00000443430 CTU1Q7Z7A3 348 aaKnown RBP26.97■■□□□ 1.91
POLR2J3-202ENST00000443430 REM2Q8IYK8 340 aaPredicted RBP26.97■■□□□ 1.91
POLR2J3-202ENST00000443430 RIC3Q7Z5B4 369 aa26.95■■□□□ 1.9
POLR2J3-202ENST00000443430 RUNDC1Q96C34 613 aa26.95■■□□□ 1.9
POLR2J3-202ENST00000443430 GMLQ99445 158 aa26.95■■□□□ 1.9
POLR2J3-202ENST00000443430 FKBP1BP68106 108 aa26.94■■□□□ 1.9
POLR2J3-202ENST00000443430 PAPPA2Q9BXP8 1791 aa26.94■■□□□ 1.9
POLR2J3-202ENST00000443430 MYOZ2Q9NPC6 264 aa26.93■■□□□ 1.9
POLR2J3-202ENST00000443430 USP17L8P0C7I0 530 aa26.92■■□□□ 1.9
POLR2J3-202ENST00000443430 HSP90B1P14625 803 aaKnown RBP26.92■■□□□ 1.9
POLR2J3-202ENST00000443430 CCDC152Q4G0S7 254 aa26.92■■□□□ 1.9
POLR2J3-202ENST00000443430 PHAXQ9H814 394 aaKnown RBP26.92■■□□□ 1.9
POLR2J3-202ENST00000443430 PITPNM2Q9BZ72 1349 aa26.91■■□□□ 1.9
POLR2J3-202ENST00000443430 GOLGA2Q08379 1002 aa26.91■■□□□ 1.9
POLR2J3-202ENST00000443430 MOB2Q70IA6 237 aa26.91■■□□□ 1.9
POLR2J3-202ENST00000443430 MYD88Q99836 296 aa26.91■■□□□ 1.9
POLR2J3-202ENST00000443430 MBIPQ9NS73 344 aa26.91■■□□□ 1.9
POLR2J3-202ENST00000443430 SCAF8Q9UPN6 1271 aaKnown RBP26.91■■□□□ 1.9
POLR2J3-202ENST00000443430 PDE8AO60658 829 aa26.9■■□□□ 1.9
POLR2J3-202ENST00000443430 PCCAP05165 728 aaPredicted RBP26.9■■□□□ 1.9
POLR2J3-202ENST00000443430 CCDC191Q8NCU4 936 aa26.9■■□□□ 1.9
POLR2J3-202ENST00000443430 JARID2Q92833 1246 aaPredicted RBP26.9■■□□□ 1.9
POLR2J3-202ENST00000443430 CCDC85AQ96PX6 553 aaPredicted RBP26.9■■□□□ 1.9
POLR2J3-202ENST00000443430 XDHP47989 1333 aa26.9■■□□□ 1.9
POLR2J3-202ENST00000443430 HPS5Q9UPZ3 1129 aa26.89■■□□□ 1.9
POLR2J3-202ENST00000443430 USP17L3A6NCW0 530 aa26.88■■□□□ 1.89
POLR2J3-202ENST00000443430 USP17L4A6NCW7 530 aa26.88■■□□□ 1.89
POLR2J3-202ENST00000443430 USP17L1Q7RTZ2 530 aa26.88■■□□□ 1.89
POLR2J3-202ENST00000443430 PODNQ7Z5L7 613 aa26.88■■□□□ 1.89
POLR2J3-202ENST00000443430 MYBBP1AQ9BQG0 1328 aaKnown RBP26.88■■□□□ 1.89
POLR2J3-202ENST00000443430 UBE2Q2LH0YL09 131 aa26.87■■□□□ 1.89
POLR2J3-202ENST00000443430 ATP2B4P23634 1241 aa26.87■■□□□ 1.89
POLR2J3-202ENST00000443430 PRAMEF18Q5VWM3 479 aa26.87■■□□□ 1.89
POLR2J3-202ENST00000443430 ANKRD18AQ8IVF6 992 aa26.87■■□□□ 1.89
POLR2J3-202ENST00000443430 ADAMTS8Q9UP79 889 aa26.87■■□□□ 1.89
POLR2J3-202ENST00000443430 ZNF853P0CG23 659 aa26.86■■□□□ 1.89
POLR2J3-202ENST00000443430 CWC25Q9NXE8 425 aaPredicted RBP26.86■■□□□ 1.89
POLR2J3-202ENST00000443430 WTIPA6NIX2 430 aaPredicted RBP26.85■■□□□ 1.89
POLR2J3-202ENST00000443430 TBC1D8O95759 1140 aa26.85■■□□□ 1.89
POLR2J3-202ENST00000443430 WDR43Q15061 677 aaKnown RBP eCLIP26.85■■□□□ 1.89
POLR2J3-202ENST00000443430 PKN2Q16513 984 aaKnown RBP26.85■■□□□ 1.89
POLR2J3-202ENST00000443430 NBPF9Q3BBW0 867 aa26.85■■□□□ 1.89
POLR2J3-202ENST00000443430 ZNF296Q8WUU4 475 aaPredicted RBP26.85■■□□□ 1.89
POLR2J3-202ENST00000443430 PRPF38BQ5VTL8 546 aaKnown RBP26.84■■□□□ 1.89
POLR2J3-202ENST00000443430 HDAC9Q9UKV0 1011 aa26.84■■□□□ 1.89
POLR2J3-202ENST00000443430 ELL2O00472 640 aaPredicted RBP26.83■■□□□ 1.89
POLR2J3-202ENST00000443430 METTL22Q9BUU2 404 aaPredicted RBP26.83■■□□□ 1.89
POLR2J3-202ENST00000443430 TM4SF4P48230 202 aa26.82■■□□□ 1.88
POLR2J3-202ENST00000443430 MXD3Q9BW11 206 aa26.82■■□□□ 1.88
POLR2J3-202ENST00000443430 DACT2Q5SW24 774 aa26.81■■□□□ 1.88
POLR2J3-202ENST00000443430 MED23Q9ULK4 1368 aa26.81■■□□□ 1.88
POLR2J3-202ENST00000443430 ZNF646O15015 1829 aaPredicted RBP26.81■■□□□ 1.88
POLR2J3-202ENST00000443430 WNT10BO00744 389 aa26.8■■□□□ 1.88
POLR2J3-202ENST00000443430 TTLL12Q14166 644 aaPredicted RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms