RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 ZNF853P0CG23 659 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 MAP2K2P36507 400 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 CDC37L1Q7L3B6 337 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 USP48Q86UV5 1035 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 HHIPL1Q96JK4 782 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 ZIC5Q96T25 663 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 TNRC18O15417 2968 aaPredicted RBP10.84□□□□□ -0.67
TOP3B-209ENST00000442653 ECE2O60344 883 aa10.83□□□□□ -0.68
TOP3B-209ENST00000442653 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
TOP3B-209ENST00000442653 DOK7Q18PE1 504 aa10.83□□□□□ -0.68
TOP3B-209ENST00000442653 TBC1D10BQ4KMP7 808 aaPredicted RBP10.83□□□□□ -0.68
TOP3B-209ENST00000442653 TBC1D16Q8TBP0 767 aa10.83□□□□□ -0.68
TOP3B-209ENST00000442653 DPF2Q92785 391 aa10.83□□□□□ -0.68
TOP3B-209ENST00000442653 PHAXQ9H814 394 aaKnown RBP10.83□□□□□ -0.68
TOP3B-209ENST00000442653 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.68
TOP3B-209ENST00000442653 ELL2O00472 640 aaPredicted RBP10.82□□□□□ -0.68
TOP3B-209ENST00000442653 APAF1O14727 1248 aa10.82□□□□□ -0.68
TOP3B-209ENST00000442653 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
TOP3B-209ENST00000442653 KRT26Q7Z3Y9 468 aa10.82□□□□□ -0.68
TOP3B-209ENST00000442653 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
TOP3B-209ENST00000442653 ZBTB38Q8NAP3 1195 aaPredicted RBP10.82□□□□□ -0.68
TOP3B-209ENST00000442653 JARID2Q92833 1246 aaPredicted RBP10.82□□□□□ -0.68
TOP3B-209ENST00000442653 ADM5C9JUS6 153 aa10.81□□□□□ -0.68
TOP3B-209ENST00000442653 UFL1O94874 794 aa10.81□□□□□ -0.68
TOP3B-209ENST00000442653 HUNKP57058 714 aa10.81□□□□□ -0.68
TOP3B-209ENST00000442653 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
TOP3B-209ENST00000442653 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
TOP3B-209ENST00000442653 C8orf58Q8NAV2 365 aa10.81□□□□□ -0.68
TOP3B-209ENST00000442653 MYD88Q99836 296 aa10.81□□□□□ -0.68
TOP3B-209ENST00000442653 PRKRIP1Q9H875 184 aaPredicted RBP10.81□□□□□ -0.68
TOP3B-209ENST00000442653 IFT57Q9NWB7 429 aa10.81□□□□□ -0.68
TOP3B-209ENST00000442653 POLR2AP24928 1970 aaKnown RBP10.81□□□□□ -0.68
TOP3B-209ENST00000442653 ASTN2O75129 1339 aaPredicted RBP10.81□□□□□ -0.68
TOP3B-209ENST00000442653 CASP8AP2Q9UKL3 1982 aa10.8□□□□□ -0.68
TOP3B-209ENST00000442653 CA12O43570 354 aa10.8□□□□□ -0.68
TOP3B-209ENST00000442653 RPS12P25398 132 aaKnown RBP10.8□□□□□ -0.68
TOP3B-209ENST00000442653 CCDC85AQ96PX6 553 aaPredicted RBP10.8□□□□□ -0.68
TOP3B-209ENST00000442653 EYA3Q99504 573 aa10.8□□□□□ -0.68
TOP3B-209ENST00000442653 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
TOP3B-209ENST00000442653 PODXL2Q9NZ53 605 aa10.8□□□□□ -0.68
TOP3B-209ENST00000442653 WTIPA6NIX2 430 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-209ENST00000442653 CCDC85CA6NKD9 419 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-209ENST00000442653 PCCAP05165 728 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-209ENST00000442653 VIL1P09327 827 aaKnown RBP10.79□□□□□ -0.68
TOP3B-209ENST00000442653 GNAI1P63096 354 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 NOGQ13253 232 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 KIF4BQ2VIQ3 1234 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 FAM161AQ3B820 660 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 ZC3H12CQ9C0D7 883 aaKnown RBP10.79□□□□□ -0.68
TOP3B-209ENST00000442653 GGA3Q9NZ52 723 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 ANKIB1Q9P2G1 1089 aa10.79□□□□□ -0.68
TOP3B-209ENST00000442653 ZNF280AP59817 542 aaPredicted RBP10.78□□□□□ -0.68
TOP3B-209ENST00000442653 CCDC152Q4G0S7 254 aa10.78□□□□□ -0.68
TOP3B-209ENST00000442653 RGMBQ6NW40 437 aa10.78□□□□□ -0.68
TOP3B-209ENST00000442653 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
TOP3B-209ENST00000442653 DCPSQ96C86 337 aaKnown RBP10.78□□□□□ -0.68
TOP3B-209ENST00000442653 METTL22Q9BUU2 404 aaPredicted RBP10.78□□□□□ -0.68
TOP3B-209ENST00000442653 GBA2Q9HCG7 927 aaPredicted RBP10.78□□□□□ -0.68
TOP3B-209ENST00000442653 CWC25Q9NXE8 425 aaPredicted RBP10.78□□□□□ -0.68
TOP3B-209ENST00000442653 GGA1Q9UJY5 639 aa10.78□□□□□ -0.68
TOP3B-209ENST00000442653 ZNF609O15014 1411 aa10.77□□□□□ -0.68
TOP3B-209ENST00000442653 PDE8AO60658 829 aa10.77□□□□□ -0.69
TOP3B-209ENST00000442653 IGKV5-2P06315 115 aa10.77□□□□□ -0.69
TOP3B-209ENST00000442653 HSP90B1P14625 803 aaKnown RBP10.77□□□□□ -0.69
TOP3B-209ENST00000442653 CALD1Q05682 793 aaKnown RBP10.77□□□□□ -0.69
TOP3B-209ENST00000442653 GMLQ99445 158 aa10.77□□□□□ -0.69
TOP3B-209ENST00000442653 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
TOP3B-209ENST00000442653 MAP3K2Q9Y2U5 619 aa10.77□□□□□ -0.69
TOP3B-209ENST00000442653 XDHP47989 1333 aa10.77□□□□□ -0.69
TOP3B-209ENST00000442653 PSME4Q14997 1843 aa10.77□□□□□ -0.69
TOP3B-209ENST00000442653 ANGEL2Q5VTE6 544 aaKnown RBP10.76□□□□□ -0.69
TOP3B-209ENST00000442653 RSBN1LQ6PCB5 846 aaPredicted RBP10.76□□□□□ -0.69
TOP3B-209ENST00000442653 SULF1Q8IWU6 871 aa10.76□□□□□ -0.69
TOP3B-209ENST00000442653 C2orf69Q8N8R5 385 aa10.76□□□□□ -0.69
TOP3B-209ENST00000442653 TSR2Q969E8 191 aaKnown RBP10.76□□□□□ -0.69
TOP3B-209ENST00000442653 CDCA5Q96FF9 252 aa10.76□□□□□ -0.69
TOP3B-209ENST00000442653 PI4KAP2A4QPH2 592 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 G3V3G9 751 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 DDX58O95786 925 aaKnown RBP10.75□□□□□ -0.69
TOP3B-209ENST00000442653 RGS19P49795 217 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 ZNF157P51786 506 aaPredicted RBP10.75□□□□□ -0.69
TOP3B-209ENST00000442653 CTSWP56202 376 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 KIF23Q02241 960 aaPredicted RBP10.75□□□□□ -0.69
TOP3B-209ENST00000442653 DGKZQ13574 1117 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 SCARF1Q14162 830 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 CWF19L2Q2TBE0 894 aaKnown RBP10.75□□□□□ -0.69
TOP3B-209ENST00000442653 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 CCDC30Q5VVM6 783 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 KSR2Q6VAB6 950 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 ANKRD18AQ8IVF6 992 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 PI4KAP1Q8N8J0 262 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 AGBL3Q8NEM8 1001 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 CCDC102AQ96A19 550 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 GREM2Q9H772 168 aa10.75□□□□□ -0.69
TOP3B-209ENST00000442653 SCAF8Q9UPN6 1271 aaKnown RBP10.75□□□□□ -0.69
TOP3B-209ENST00000442653 SPEF2Q9C093 1822 aa10.74□□□□□ -0.69
TOP3B-209ENST00000442653 HTTP42858 3142 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms