RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 RLBP1P12271 317 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 GNAT2P19087 354 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 AMPD3Q01432 767 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 PTPN14Q15678 1187 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 ARHGAP29Q52LW3 1261 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 PLEKHM2Q8IWE5 1019 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 PLEKHG3A1L390 1219 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 CHL1O00533 1208 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 GCP02774 474 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 TOP1P11387 765 aaKnown RBP7.4□□□□□ -1.23
CNOT1-202ENST00000441024 ZFYVE27Q5T4F4 411 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 PCDH11XQ9BZA7 1347 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 PCDH11YQ9BZA8 1340 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 CAMTA1Q9Y6Y1 1673 aa7.4□□□□□ -1.23
CNOT1-202ENST00000441024 GOLGA6L10A6NI86 522 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 SSBP05455 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
CNOT1-202ENST00000441024 MCM3P25205 808 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 TSPYL6Q8N831 410 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 DDX21Q9NR30 783 aaKnown RBP eCLIP7.39□□□□□ -1.23
CNOT1-202ENST00000441024 CLIP2Q9UDT6 1046 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 CCT2P78371 535 aaKnown RBP7.39□□□□□ -1.23
CNOT1-202ENST00000441024 TRAF1Q13077 416 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 CHRNA2Q15822 529 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 LMBR1LQ6UX01 489 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 LEKR1Q6ZMV7 388 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 KIF18AQ8NI77 898 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 KCNG4Q8TDN1 519 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 CUL5Q93034 780 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 GNAQP50148 359 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 KIAA1328Q86T90 577 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 TAF4BQ92750 862 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 NGLY1Q96IV0 654 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 PDCL3Q9H2J4 239 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 RBM27Q9P2N5 1060 aaKnown RBP7.39□□□□□ -1.23
CNOT1-202ENST00000441024 RNF113AO15541 343 aaKnown RBP7.39□□□□□ -1.23
CNOT1-202ENST00000441024 SPA17Q15506 151 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 CCDC102BQ68D86 513 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 ATL3Q6DD88 541 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 ANKRD18AQ8IVF6 992 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 FAM114A1Q8IWE2 563 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 CDCA7Q9BWT1 371 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-202ENST00000441024 KAT14Q9H8E8 782 aa7.39□□□□□ -1.23
CNOT1-202ENST00000441024 KDM2BQ8NHM5 1336 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 MPHOSPH10O00566 681 aaKnown RBP7.38□□□□□ -1.23
CNOT1-202ENST00000441024 RRP9O43818 475 aaKnown RBP7.38□□□□□ -1.23
CNOT1-202ENST00000441024 ADAMTS2O95450 1211 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
CNOT1-202ENST00000441024 CCDC150Q8NCX0 1101 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 GTPBP4Q9BZE4 634 aaKnown RBP7.38□□□□□ -1.23
CNOT1-202ENST00000441024 NYXQ9GZU5 481 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 RTL1A6NKG5 1358 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 KIF5CO60282 957 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 RAB3GAP1Q15042 981 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 ZSCAN23Q3MJ62 389 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 JAKMIP3Q5VZ66 844 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 UBXN4Q92575 508 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 ESR2Q92731 530 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 UTP14AQ9BVJ6 771 aaKnown RBP7.38□□□□□ -1.23
CNOT1-202ENST00000441024 PAG1Q9NWQ8 432 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-202ENST00000441024 F13A1P00488 732 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 ANXA1P04083 346 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 CALM1P0DP23 149 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 CALM2P0DP24 149 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 CALM3P0DP25 149 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 CHMLP26374 656 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 NMIQ13287 307 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-202ENST00000441024 WTAPQ15007 396 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 CALML4Q96GE6 196 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 HELLSQ9NRZ9 838 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 RMND1Q9NWS8 449 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 TRIM35Q9UPQ4 493 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 POTEB2H3BUK9 544 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 ZBTB43O43298 467 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 YEATS4O95619 227 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 KCNA6P17658 529 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 ST5P78524 1137 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 GUCY1B3Q02153 619 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 BRF1Q92994 677 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 USP26Q9BXU7 913 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 SNRKQ9NRH2 765 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 TCP11L1Q9NUJ3 509 aa7.38□□□□□ -1.23
CNOT1-202ENST00000441024 RGPD1P0DJD0 1748 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 KLF18A0A0U1RQI7 1052 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 TUBB4AP04350 444 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 POTEJP0CG39 1038 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 VPS36Q86VN1 386 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 VIRMAQ69YN4 1812 aaKnown RBP7.37□□□□□ -1.23
CNOT1-202ENST00000441024 TMEM2Q9UHN6 1383 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 HLA-DOAP06340 250 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 NBPF7P0C2Y1 421 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-202ENST00000441024 TSHZ3Q63HK5 1081 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 RTL9Q8NET4 1388 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 DESP17661 470 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 CASQ1P31415 396 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 ZNF165P49910 485 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 DNAI2Q9GZS0 605 aa7.37□□□□□ -1.23
CNOT1-202ENST00000441024 TFIP11Q9UBB9 837 aaKnown RBP7.37□□□□□ -1.23
CNOT1-202ENST00000441024 TRPM3Q9HCF6 1732 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-202ENST00000441024 TSPY2A6NKD2 308 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms