RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 CNBD1Q8NA66 436 aa23.27■■□□□ 1.32
SNX17-203ENST00000440760 EDC3Q96F86 508 aaKnown RBP23.27■■□□□ 1.32
SNX17-203ENST00000440760 MPHOSPH8Q99549 860 aa23.27■■□□□ 1.32
SNX17-203ENST00000440760 CAMKK2Q96RR4 588 aa23.26■■□□□ 1.31
SNX17-203ENST00000440760 DDR1Q08345 913 aa23.25■■□□□ 1.31
SNX17-203ENST00000440760 PNPLA7Q6ZV29 1317 aa23.25■■□□□ 1.31
SNX17-203ENST00000440760 ATP5JP18859 108 aa23.25■■□□□ 1.31
SNX17-203ENST00000440760 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
SNX17-203ENST00000440760 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
SNX17-203ENST00000440760 PRR5LQ6MZQ0 368 aa23.25■■□□□ 1.31
SNX17-203ENST00000440760 IL25Q9H293 177 aa23.25■■□□□ 1.31
SNX17-203ENST00000440760 NLRP3Q96P20 1036 aa23.24■■□□□ 1.31
SNX17-203ENST00000440760 AKAP2Q9Y2D5 859 aa23.24■■□□□ 1.31
SNX17-203ENST00000440760 ARAP2Q8WZ64 1704 aa23.24■■□□□ 1.31
SNX17-203ENST00000440760 HMGB2P26583 209 aaKnown RBP23.23■■□□□ 1.31
SNX17-203ENST00000440760 TM4SF1P30408 202 aa23.23■■□□□ 1.31
SNX17-203ENST00000440760 CELF1Q92879 486 aaKnown RBP23.23■■□□□ 1.31
SNX17-203ENST00000440760 XAGE2Q96GT9 111 aa23.23■■□□□ 1.31
SNX17-203ENST00000440760 CDC5LQ99459 802 aaKnown RBP23.23■■□□□ 1.31
SNX17-203ENST00000440760 DNAJC2Q99543 621 aaKnown RBP23.23■■□□□ 1.31
SNX17-203ENST00000440760 ESYT1Q9BSJ8 1104 aa23.23■■□□□ 1.31
SNX17-203ENST00000440760 SNAP23O00161 211 aa23.23■■□□□ 1.31
SNX17-203ENST00000440760 SERPINB2P05120 415 aa23.23■■□□□ 1.31
SNX17-203ENST00000440760 DEFB132Q7Z7B7 95 aa23.23■■□□□ 1.31
SNX17-203ENST00000440760 MROH5Q6ZUA9 1318 aa23.23■■□□□ 1.31
SNX17-203ENST00000440760 TAF5LO75529 589 aa23.22■■□□□ 1.31
SNX17-203ENST00000440760 PDE8BO95263 885 aa23.22■■□□□ 1.31
SNX17-203ENST00000440760 EVI5LQ96CN4 794 aa23.22■■□□□ 1.31
SNX17-203ENST00000440760 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
SNX17-203ENST00000440760 ANKRD18AQ8IVF6 992 aa23.21■■□□□ 1.31
SNX17-203ENST00000440760 GORABQ5T7V8 394 aa23.2■■□□□ 1.3
SNX17-203ENST00000440760 MSL1Q68DK7 614 aa23.2■■□□□ 1.3
SNX17-203ENST00000440760 IPO9Q96P70 1041 aaKnown RBP23.2■■□□□ 1.3
SNX17-203ENST00000440760 HAUS7Q99871 368 aa23.2■■□□□ 1.3
SNX17-203ENST00000440760 FSD1Q9BTV5 496 aa23.2■■□□□ 1.3
SNX17-203ENST00000440760 CHRNDQ07001 517 aa23.19■■□□□ 1.3
SNX17-203ENST00000440760 PUM3Q15397 648 aaKnown RBP23.19■■□□□ 1.3
SNX17-203ENST00000440760 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
SNX17-203ENST00000440760 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
SNX17-203ENST00000440760 TTC39AQ5SRH9 613 aa23.18■■□□□ 1.3
SNX17-203ENST00000440760 CWC27Q6UX04 472 aaKnown RBP23.18■■□□□ 1.3
SNX17-203ENST00000440760 IFIT1P09914 478 aaKnown RBP23.18■■□□□ 1.3
SNX17-203ENST00000440760 FGFR2P21802 821 aa23.18■■□□□ 1.3
SNX17-203ENST00000440760 RBM25P49756 843 aaKnown RBP23.18■■□□□ 1.3
SNX17-203ENST00000440760 ST5P78524 1137 aa23.18■■□□□ 1.3
SNX17-203ENST00000440760 SLC51AQ86UW1 340 aa23.18■■□□□ 1.3
SNX17-203ENST00000440760 DIAPH3Q9NSV4 1193 aa23.18■■□□□ 1.3
SNX17-203ENST00000440760 ANKRD31Q8N7Z5 1873 aa23.17■■□□□ 1.3
SNX17-203ENST00000440760 SCARF1Q14162 830 aa23.17■■□□□ 1.3
SNX17-203ENST00000440760 ILDR1Q86SU0 546 aaPredicted RBP23.17■■□□□ 1.3
SNX17-203ENST00000440760 FLAD1Q8NFF5 587 aa23.17■■□□□ 1.3
SNX17-203ENST00000440760 USP26Q9BXU7 913 aa23.17■■□□□ 1.3
SNX17-203ENST00000440760 REC8O95072 547 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 BAG6P46379 1132 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 SLC15A2Q16348 729 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 CCDC158Q5M9N0 1113 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 NRXN2Q9P2S2 1712 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 AKAP11Q9UKA4 1901 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 GOLIM4O00461 696 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 CHGBP05060 677 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 QSER1Q2KHR3 1735 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 LPIN2Q92539 896 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 SNRKQ9NRH2 765 aa23.16■■□□□ 1.3
SNX17-203ENST00000440760 BSDC1Q9NW68 430 aaPredicted RBP23.16■■□□□ 1.3
SNX17-203ENST00000440760 PI16Q6UXB8 463 aa23.15■■□□□ 1.3
SNX17-203ENST00000440760 FAM227BQ96M60 508 aa23.15■■□□□ 1.3
SNX17-203ENST00000440760 ANO2Q9NQ90 1003 aa23.15■■□□□ 1.3
SNX17-203ENST00000440760 PAG1Q9NWQ8 432 aa23.15■■□□□ 1.3
SNX17-203ENST00000440760 STK32BQ9NY57 414 aa23.15■■□□□ 1.3
SNX17-203ENST00000440760 WTIPA6NIX2 430 aaPredicted RBP23.14■■□□□ 1.3
SNX17-203ENST00000440760 SGSM2O43147 1006 aa23.14■■□□□ 1.3
SNX17-203ENST00000440760 NLGN1Q8N2Q7 840 aa23.14■■□□□ 1.3
SNX17-203ENST00000440760 SLC5A1P13866 664 aa23.14■■□□□ 1.29
SNX17-203ENST00000440760 PHKA1P46020 1223 aa23.14■■□□□ 1.29
SNX17-203ENST00000440760 RPS8P62241 208 aaKnown RBP23.14■■□□□ 1.29
SNX17-203ENST00000440760 NMIQ13287 307 aaPredicted RBP23.14■■□□□ 1.29
SNX17-203ENST00000440760 MINPP1Q9UNW1 487 aa23.14■■□□□ 1.29
SNX17-203ENST00000440760 MMP10P09238 476 aa23.13■■□□□ 1.29
SNX17-203ENST00000440760 ANTXR1Q9H6X2 564 aa23.13■■□□□ 1.29
SNX17-203ENST00000440760 A0A0D9SFI3 127 aa23.12■■□□□ 1.29
SNX17-203ENST00000440760 FKBP4Q02790 459 aaKnown RBP eCLIP23.12■■□□□ 1.29
SNX17-203ENST00000440760 DDRGK1Q96HY6 314 aa23.12■■□□□ 1.29
SNX17-203ENST00000440760 KIF2CQ99661 725 aa23.12■■□□□ 1.29
SNX17-203ENST00000440760 EIF5BO60841 1220 aaKnown RBP23.12■■□□□ 1.29
SNX17-203ENST00000440760 MCAMP43121 646 aa23.12■■□□□ 1.29
SNX17-203ENST00000440760 CCDC102BQ68D86 513 aa23.12■■□□□ 1.29
SNX17-203ENST00000440760 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.12■■□□□ 1.29
SNX17-203ENST00000440760 SLC4A3P48751 1232 aa23.11■■□□□ 1.29
SNX17-203ENST00000440760 ZAP70P43403 619 aa23.1■■□□□ 1.29
SNX17-203ENST00000440760 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
SNX17-203ENST00000440760 KBTBD3Q8NAB2 608 aa23.1■■□□□ 1.29
SNX17-203ENST00000440760 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
SNX17-203ENST00000440760 MYO5AQ9Y4I1 1855 aaKnown RBP23.1■■□□□ 1.29
SNX17-203ENST00000440760 COL11A2P13942 1736 aaPredicted RBP23.1■■□□□ 1.29
SNX17-203ENST00000440760 GRAPQ13588 217 aa23.1■■□□□ 1.29
SNX17-203ENST00000440760 SLFNL1Q499Z3 407 aa23.1■■□□□ 1.29
SNX17-203ENST00000440760 GRAPLQ8TC17 118 aaPredicted RBP23.1■■□□□ 1.29
SNX17-203ENST00000440760 PDGFDQ9GZP0 370 aaPredicted RBP23.1■■□□□ 1.29
SNX17-203ENST00000440760 HIP1O00291 1037 aa23.09■■□□□ 1.29
SNX17-203ENST00000440760 RFX7Q2KHR2 1363 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms