RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 VAT1LQ9HCJ6 419 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 LMBRD1Q9NUN5 540 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 ZNF521Q96K83 1311 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 GAS2L3Q86XJ1 694 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 WHAMMQ8TF30 809 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 SERPINA10Q9UK55 444 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 SAMD9Q5K651 1589 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 FSD2A1L4K1 749 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 BIN1O00499 593 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 POLR3GO15318 223 aaPredicted RBP13.23□□□□□ -0.29
CCBE1-202ENST00000439986 CACNA2D4Q7Z3S7 1137 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 TMC6Q7Z403 805 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 SEPT8Q92599 483 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
CCBE1-202ENST00000439986 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
CCBE1-202ENST00000439986 TNIP1Q15025 636 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 A0A1W2PP64 1363 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 KDM5CP41229 1560 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
CCBE1-202ENST00000439986 CHMLP26374 656 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 AK2P54819 239 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 SPA17Q15506 151 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 CC2D2BQ6DHV5 1058 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 CEP131Q9UPN4 1083 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 APBB1IPQ7Z5R6 666 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-202ENST00000439986 ARL10Q8N8L6 244 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-202ENST00000439986 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-202ENST00000439986 ZMYM3Q14202 1370 aa13.22□□□□□ -0.29
CCBE1-202ENST00000439986 PPP4R3AQ6IN85 833 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 WASF1Q92558 559 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 SKILP12757 684 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 ZBTB9Q96C00 473 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 ERCC3P19447 782 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 GPTP24298 496 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 GRM1Q13255 1194 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
CCBE1-202ENST00000439986 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 TSG101Q99816 390 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.29
CCBE1-202ENST00000439986 LARP1Q6PKG0 1096 aaKnown RBP13.21□□□□□ -0.29
CCBE1-202ENST00000439986 PTGS1P23219 599 aa13.21□□□□□ -0.3
CCBE1-202ENST00000439986 TYRO3Q06418 890 aa13.21□□□□□ -0.3
CCBE1-202ENST00000439986 ARIH1Q9Y4X5 557 aaPredicted RBP13.21□□□□□ -0.3
CCBE1-202ENST00000439986 CCDC171Q6TFL3 1326 aa13.21□□□□□ -0.3
CCBE1-202ENST00000439986 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
CCBE1-202ENST00000439986 KCNA1Q09470 495 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 KRT222Q8N1A0 295 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 NUP88Q99567 741 aaPredicted RBP13.2□□□□□ -0.3
CCBE1-202ENST00000439986 CD109Q6YHK3 1445 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 GSTTP1A0A1W2PQM5 241 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 STARD3NLO95772 234 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 NEK1Q96PY6 1258 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 SYT1P21579 422 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 RBM8AQ9Y5S9 174 aaKnown RBP13.2□□□□□ -0.3
CCBE1-202ENST00000439986 COMMD10Q9Y6G5 202 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 MAGI2Q86UL8 1455 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 TRIM21P19474 475 aaKnown RBP13.2□□□□□ -0.3
CCBE1-202ENST00000439986 FAM107BQ9H098 131 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 NAPBQ9H115 298 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 ANXA1P04083 346 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCBE1-202ENST00000439986 PPFIBP2Q8ND30 876 aa13.2□□□□□ -0.3
CCBE1-202ENST00000439986 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 FERP16591 822 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 PUF60Q9UHX1 559 aaKnown RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 IFFO1Q0D2I5 559 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 BMS1Q14692 1282 aaKnown RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 FKBP15Q5T1M5 1219 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 G3BP2Q9UN86 482 aaKnown RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 BRF1Q92994 677 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 SRRTQ9BXP5 876 aaKnown RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 FAM184BQ9ULE4 1060 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-202ENST00000439986 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
CCBE1-202ENST00000439986 NLRP5P59047 1200 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms