RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 TRPM4Q8TD43 1214 aa20.54■□□□□ 0.88
ITGB1-207ENST00000439974 ZC3H15Q8WU90 426 aaKnown RBP20.54■□□□□ 0.88
ITGB1-207ENST00000439974 JARID2Q92833 1246 aaPredicted RBP20.54■□□□□ 0.88
ITGB1-207ENST00000439974 PODXL2Q9NZ53 605 aa20.54■□□□□ 0.88
ITGB1-207ENST00000439974 PGAP2Q9UHJ9 254 aa20.54■□□□□ 0.88
ITGB1-207ENST00000439974 WDR33Q9C0J8 1336 aaKnown RBP20.53■□□□□ 0.88
ITGB1-207ENST00000439974 ECE2O60344 883 aa20.53■□□□□ 0.88
ITGB1-207ENST00000439974 VAMP4O75379 141 aa20.53■□□□□ 0.88
ITGB1-207ENST00000439974 HIRAP54198 1017 aaPredicted RBP20.53■□□□□ 0.88
ITGB1-207ENST00000439974 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
ITGB1-207ENST00000439974 NEXNQ0ZGT2 675 aa20.53■□□□□ 0.88
ITGB1-207ENST00000439974 MICALL2Q8IY33 904 aa20.53■□□□□ 0.88
ITGB1-207ENST00000439974 DPF2Q92785 391 aa20.53■□□□□ 0.88
ITGB1-207ENST00000439974 ZBTB12Q9Y330 459 aaPredicted RBP20.53■□□□□ 0.88
ITGB1-207ENST00000439974 IGKV5-2P06315 115 aa20.52■□□□□ 0.88
ITGB1-207ENST00000439974 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
ITGB1-207ENST00000439974 DOK7Q18PE1 504 aa20.52■□□□□ 0.88
ITGB1-207ENST00000439974 CST9Q5W186 159 aa20.52■□□□□ 0.88
ITGB1-207ENST00000439974 G2E3Q7L622 706 aa20.52■□□□□ 0.88
ITGB1-207ENST00000439974 GPR101Q96P66 508 aaPredicted RBP20.52■□□□□ 0.88
ITGB1-207ENST00000439974 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
ITGB1-207ENST00000439974 GLIS2Q9BZE0 524 aaPredicted RBP20.52■□□□□ 0.88
ITGB1-207ENST00000439974 ZC3H12CQ9C0D7 883 aaKnown RBP20.52■□□□□ 0.88
ITGB1-207ENST00000439974 WBP1LQ9NX94 342 aa20.52■□□□□ 0.88
ITGB1-207ENST00000439974 ANKIB1Q9P2G1 1089 aa20.52■□□□□ 0.88
ITGB1-207ENST00000439974 SHTN1A0MZ66 631 aa20.51■□□□□ 0.87
ITGB1-207ENST00000439974 UFL1O94874 794 aa20.51■□□□□ 0.87
ITGB1-207ENST00000439974 ANKRD18AQ8IVF6 992 aa20.51■□□□□ 0.87
ITGB1-207ENST00000439974 GGA1Q9UJY5 639 aa20.51■□□□□ 0.87
ITGB1-207ENST00000439974 TLL2Q9Y6L7 1015 aa20.51■□□□□ 0.87
ITGB1-207ENST00000439974 E9PSI1 815 aa20.5■□□□□ 0.87
ITGB1-207ENST00000439974 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
ITGB1-207ENST00000439974 RPS12P25398 132 aaKnown RBP20.5■□□□□ 0.87
ITGB1-207ENST00000439974 ECE1P42892 770 aa20.5■□□□□ 0.87
ITGB1-207ENST00000439974 CTCFP49711 727 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-207ENST00000439974 CTSWP56202 376 aa20.5■□□□□ 0.87
ITGB1-207ENST00000439974 PAXIP1Q6ZW49 1069 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-207ENST00000439974 CDC37L1Q7L3B6 337 aa20.5■□□□□ 0.87
ITGB1-207ENST00000439974 PRDM10Q9NQV6 1147 aa20.5■□□□□ 0.87
ITGB1-207ENST00000439974 MYH3P11055 1940 aa20.49■□□□□ 0.87
ITGB1-207ENST00000439974 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
ITGB1-207ENST00000439974 CELF2O95319 508 aaKnown RBP20.49■□□□□ 0.87
ITGB1-207ENST00000439974 MAP2K1Q02750 393 aaPredicted RBP20.49■□□□□ 0.87
ITGB1-207ENST00000439974 CAPNS2Q96L46 248 aa20.49■□□□□ 0.87
ITGB1-207ENST00000439974 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
ITGB1-207ENST00000439974 SCN9AQ15858 1988 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 NEURL1BA8MQ27 555 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 G3V3G9 751 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 CWF19L2Q2TBE0 894 aaKnown RBP20.48■□□□□ 0.87
ITGB1-207ENST00000439974 DCAF8Q5TAQ9 597 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 KCNQ5Q9NR82 932 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 THSD7BQ9C0I4 1608 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 XDHP47989 1333 aa20.48■□□□□ 0.87
ITGB1-207ENST00000439974 FLIIQ13045 1269 aa20.47■□□□□ 0.87
ITGB1-207ENST00000439974 CYP4F22Q6NT55 531 aa20.47■□□□□ 0.87
ITGB1-207ENST00000439974 SAMD7Q7Z3H4 446 aa20.47■□□□□ 0.87
ITGB1-207ENST00000439974 TTLL11Q8NHH1 800 aa20.47■□□□□ 0.87
ITGB1-207ENST00000439974 CAPN15O75808 1086 aa20.46■□□□□ 0.87
ITGB1-207ENST00000439974 VIL1P09327 827 aaKnown RBP20.46■□□□□ 0.87
ITGB1-207ENST00000439974 ATP2B4P23634 1241 aa20.46■□□□□ 0.87
ITGB1-207ENST00000439974 GRM1Q13255 1194 aa20.46■□□□□ 0.87
ITGB1-207ENST00000439974 TBC1D10BQ4KMP7 808 aaPredicted RBP20.46■□□□□ 0.87
ITGB1-207ENST00000439974 SAPCD2Q86UD0 394 aa20.46■□□□□ 0.87
ITGB1-207ENST00000439974 GREM2Q9H772 168 aa20.45■□□□□ 0.86
ITGB1-207ENST00000439974 ZNF408Q9H9D4 720 aa20.45■□□□□ 0.86
ITGB1-207ENST00000439974 H7C1W4 665 aa20.44■□□□□ 0.86
ITGB1-207ENST00000439974 FKBP5Q13451 457 aaPredicted RBP20.44■□□□□ 0.86
ITGB1-207ENST00000439974 UBE3BQ7Z3V4 1068 aa20.44■□□□□ 0.86
ITGB1-207ENST00000439974 HHIPL1Q96JK4 782 aa20.44■□□□□ 0.86
ITGB1-207ENST00000439974 BSDC1Q9NW68 430 aaPredicted RBP20.44■□□□□ 0.86
ITGB1-207ENST00000439974 PSME4Q14997 1843 aa20.43■□□□□ 0.86
ITGB1-207ENST00000439974 POLR2AP24928 1970 aaKnown RBP20.43■□□□□ 0.86
ITGB1-207ENST00000439974 EGFRP00533 1210 aa20.43■□□□□ 0.86
ITGB1-207ENST00000439974 HSPA8P11142 646 aaKnown RBP20.43■□□□□ 0.86
ITGB1-207ENST00000439974 LBX1P52954 281 aa20.43■□□□□ 0.86
ITGB1-207ENST00000439974 RBM26Q5T8P6 1007 aaKnown RBP20.43■□□□□ 0.86
ITGB1-207ENST00000439974 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
ITGB1-207ENST00000439974 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
ITGB1-207ENST00000439974 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
ITGB1-207ENST00000439974 SPEF2Q9C093 1822 aa20.43■□□□□ 0.86
ITGB1-207ENST00000439974 ZNF609O15014 1411 aa20.43■□□□□ 0.86
ITGB1-207ENST00000439974 GCKRQ14397 625 aa20.42■□□□□ 0.86
ITGB1-207ENST00000439974 KIF4BQ2VIQ3 1234 aa20.42■□□□□ 0.86
ITGB1-207ENST00000439974 RSBN1LQ6PCB5 846 aaPredicted RBP20.42■□□□□ 0.86
ITGB1-207ENST00000439974 KRT26Q7Z3Y9 468 aa20.42■□□□□ 0.86
ITGB1-207ENST00000439974 PLA2G12BQ9BX93 195 aa20.42■□□□□ 0.86
ITGB1-207ENST00000439974 MINPP1Q9UNW1 487 aa20.42■□□□□ 0.86
ITGB1-207ENST00000439974 MAP2K2P36507 400 aa20.41■□□□□ 0.86
ITGB1-207ENST00000439974 PODNQ7Z5L7 613 aa20.41■□□□□ 0.86
ITGB1-207ENST00000439974 AGBL3Q8NEM8 1001 aa20.41■□□□□ 0.86
ITGB1-207ENST00000439974 LINS1Q8NG48 757 aa20.41■□□□□ 0.86
ITGB1-207ENST00000439974 DCPSQ96C86 337 aaKnown RBP20.41■□□□□ 0.86
ITGB1-207ENST00000439974 BEGAINQ9BUH8 593 aa20.41■□□□□ 0.86
ITGB1-207ENST00000439974 MED23Q9ULK4 1368 aa20.41■□□□□ 0.86
ITGB1-207ENST00000439974 IGHMBP2P38935 993 aaKnown RBP20.4■□□□□ 0.86
ITGB1-207ENST00000439974 F6X3S4 739 aa20.39■□□□□ 0.85
ITGB1-207ENST00000439974 AOC2O75106 756 aa20.39■□□□□ 0.85
ITGB1-207ENST00000439974 CCT4P50991 539 aaKnown RBP20.39■□□□□ 0.85
ITGB1-207ENST00000439974 CASP7P55210 303 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms