RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 LRRC37AA6NMS7 1700 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 PPEF1O14829 653 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-202ENST00000439369 SASH1O94885 1247 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 DPEP1P16444 411 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 CHRNA5P30532 468 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 LRRC24Q50LG9 513 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.11e-6■□□□□ 9.1
SCLT1-202ENST00000439369 PUS3Q9BZE2 481 aaKnown RBP15.65■□□□□ 0.1
SCLT1-202ENST00000439369 AKAP2Q9Y2D5 859 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 ATP6V0A2Q9Y487 856 aa15.65■□□□□ 0.1
SCLT1-202ENST00000439369 COL4A1P02462 1669 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 KCNA3P22001 575 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 PRPF40BQ6NWY9 871 aaKnown RBP15.64■□□□□ 0.09
SCLT1-202ENST00000439369 CHD1LQ86WJ1 897 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 CLASRPQ8N2M8 674 aaKnown RBP15.64■□□□□ 0.09
SCLT1-202ENST00000439369 TTLL6Q8N841 843 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 VGLL2Q8N8G2 317 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 TMX4Q9H1E5 349 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-202ENST00000439369 PIM2Q9P1W9 311 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 MINPP1Q9UNW1 487 aa15.64■□□□□ 0.09
SCLT1-202ENST00000439369 PDE8BO95263 885 aa15.63■□□□□ 0.09
SCLT1-202ENST00000439369 SOGA3Q5TF21 947 aa15.63■□□□□ 0.09
SCLT1-202ENST00000439369 ANKRD45Q5TZF3 282 aa15.63■□□□□ 0.09
SCLT1-202ENST00000439369 PPP1R1BQ9UD71 204 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-202ENST00000439369 SPEF2Q9C093 1822 aa15.62■□□□□ 0.09
SCLT1-202ENST00000439369 A0A0G2JLW4 131 aa15.62■□□□□ 0.09
SCLT1-202ENST00000439369 CHRNDQ07001 517 aa15.62■□□□□ 0.09
SCLT1-202ENST00000439369 TFCP2Q12800 502 aa15.62■□□□□ 0.09
SCLT1-202ENST00000439369 PUM3Q15397 648 aaKnown RBP15.62■□□□□ 0.09
SCLT1-202ENST00000439369 PODXL2Q9NZ53 605 aa15.62■□□□□ 0.09
SCLT1-202ENST00000439369 XDHP47989 1333 aa15.62■□□□□ 0.09
SCLT1-202ENST00000439369 ZNF609O15014 1411 aa15.61■□□□□ 0.09
SCLT1-202ENST00000439369 TAF1P21675 1872 aa15.61■□□□□ 0.09
SCLT1-202ENST00000439369 UBE4AQ14139 1066 aa15.61■□□□□ 0.09
SCLT1-202ENST00000439369 C7orf43Q8WVR3 580 aa15.61■□□□□ 0.09
SCLT1-202ENST00000439369 LEMD3Q9Y2U8 911 aa15.61■□□□□ 0.09
SCLT1-202ENST00000439369 BRCA1P38398 1863 aaKnown RBP15.61■□□□□ 0.09
SCLT1-202ENST00000439369 A0A1B0GUL6 1792 aa15.6■□□□□ 0.09
SCLT1-202ENST00000439369 APBB1O00213 710 aa15.6■□□□□ 0.09
SCLT1-202ENST00000439369 FGFR2P21802 821 aa15.6■□□□□ 0.09
SCLT1-202ENST00000439369 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
SCLT1-202ENST00000439369 TNNI3KQ59H18 835 aa15.6■□□□□ 0.09
SCLT1-202ENST00000439369 DALRD3Q5D0E6 543 aaKnown RBP15.6■□□□□ 0.09
SCLT1-202ENST00000439369 LPIN2Q92539 896 aa15.6■□□□□ 0.09
SCLT1-202ENST00000439369 FHDC1Q9C0D6 1143 aaPredicted RBP15.6■□□□□ 0.09
SCLT1-202ENST00000439369 FPGT-TNNI3KV9GXZ4 949 aa15.6■□□□□ 0.09
SCLT1-202ENST00000439369 ATP2B4P23634 1241 aa15.59■□□□□ 0.09
SCLT1-202ENST00000439369 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
SCLT1-202ENST00000439369 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
SCLT1-202ENST00000439369 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
SCLT1-202ENST00000439369 SLX4Q8IY92 1834 aa15.59■□□□□ 0.09
SCLT1-202ENST00000439369 ZBTB22O15209 634 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 IFIT2P09913 472 aaKnown RBP15.58■□□□□ 0.08
SCLT1-202ENST00000439369 IFIT1P09914 478 aaKnown RBP15.58■□□□□ 0.08
SCLT1-202ENST00000439369 SLC5A1P13866 664 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 CCDC93Q567U6 631 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 AACSQ86V21 672 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 RTKN2Q8IZC4 609 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 GPATCH3Q96I76 525 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 SYT17Q9BSW7 474 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 LNPKQ9C0E8 428 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 IL1RAPL2Q9NP60 686 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 ANKIB1Q9P2G1 1089 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 SNED1Q8TER0 1413 aa15.58■□□□□ 0.08
SCLT1-202ENST00000439369 ARAP2Q8WZ64 1704 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 A0A1B0GUL7 405 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 SMARCA5O60264 1052 aaPredicted RBP15.57■□□□□ 0.08
SCLT1-202ENST00000439369 KCNJ4P48050 445 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 GPSM2P81274 684 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 MPNDQ8N594 471 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 NLGN2Q8NFZ4 835 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 HELBQ8NG08 1087 aaPredicted RBP15.57■□□□□ 0.08
SCLT1-202ENST00000439369 EAF2Q96CJ1 260 aaPredicted RBP15.57■□□□□ 0.08
SCLT1-202ENST00000439369 RTFDC1Q9BY42 306 aaPredicted RBP15.57■□□□□ 0.08
SCLT1-202ENST00000439369 GGA1Q9UJY5 639 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 ZNF804BA4D1E1 1349 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 AOX1Q06278 1338 aa15.57■□□□□ 0.08
SCLT1-202ENST00000439369 TAF5LO75529 589 aa15.56■□□□□ 0.08
SCLT1-202ENST00000439369 DPP8Q6V1X1 898 aaPredicted RBP15.56■□□□□ 0.08
SCLT1-202ENST00000439369 SUPT20HQ8NEM7 779 aa15.56■□□□□ 0.08
SCLT1-202ENST00000439369 OSBPL3Q9H4L5 887 aa15.56■□□□□ 0.08
SCLT1-202ENST00000439369 STAP2Q9UGK3 403 aa15.56■□□□□ 0.08
SCLT1-202ENST00000439369 NSFL1CQ9UNZ2 370 aaKnown RBP15.56■□□□□ 0.08
SCLT1-202ENST00000439369 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.56■□□□□ 0.08
SCLT1-202ENST00000439369 TTC41PQ6P2S7 1318 aa15.56■□□□□ 0.08
SCLT1-202ENST00000439369 SALL3Q9BXA9 1300 aa15.56■□□□□ 0.08
SCLT1-202ENST00000439369 CACNA1SQ13698 1873 aa15.55■□□□□ 0.08
SCLT1-202ENST00000439369 MED23Q9ULK4 1368 aa15.55■□□□□ 0.08
SCLT1-202ENST00000439369 TBC1D16Q8TBP0 767 aa15.55■□□□□ 0.08
SCLT1-202ENST00000439369 ZNF512BQ96KM6 892 aaPredicted RBP15.55■□□□□ 0.08
SCLT1-202ENST00000439369 PSMD1Q99460 953 aa15.55■□□□□ 0.08
SCLT1-202ENST00000439369 VPS33BQ9H267 617 aa15.55■□□□□ 0.08
SCLT1-202ENST00000439369 DBNLQ9UJU6 430 aaKnown RBP15.55■□□□□ 0.08
SCLT1-202ENST00000439369 ARFGEF1Q9Y6D6 1849 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 DUOX1Q9NRD9 1551 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 C21orf2O43822 256 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 UFL1O94874 794 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms