RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 KLRG1Q96E93 195 aa17.64■□□□□ 0.41
PRAME-209ENST00000439106 WTIPA6NIX2 430 aaPredicted RBP17.63■□□□□ 0.41
PRAME-209ENST00000439106 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
PRAME-209ENST00000439106 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
PRAME-209ENST00000439106 PNMA8AQ86V59 439 aaPredicted RBP17.63■□□□□ 0.41
PRAME-209ENST00000439106 KCNQ5Q9NR82 932 aa17.63■□□□□ 0.41
PRAME-209ENST00000439106 GPRC5DQ9NZD1 345 aa17.63■□□□□ 0.41
PRAME-209ENST00000439106 PASKQ96RG2 1323 aa17.63■□□□□ 0.41
PRAME-209ENST00000439106 CCER2I3L3R5 266 aa17.62■□□□□ 0.41
PRAME-209ENST00000439106 ECE2O60344 883 aa17.62■□□□□ 0.41
PRAME-209ENST00000439106 ITGBL1O95965 494 aaPredicted RBP17.62■□□□□ 0.41
PRAME-209ENST00000439106 FMR1Q06787 632 aaKnown RBP eCLIP17.62■□□□□ 0.416e-14■□□□□ 9.2
PRAME-209ENST00000439106 SLC4A10Q6U841 1118 aa17.62■□□□□ 0.41
PRAME-209ENST00000439106 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
PRAME-209ENST00000439106 BCL2L13Q9BXK5 485 aa17.62■□□□□ 0.41
PRAME-209ENST00000439106 PODXL2Q9NZ53 605 aa17.62■□□□□ 0.41
PRAME-209ENST00000439106 GGA1Q9UJY5 639 aa17.62■□□□□ 0.41
PRAME-209ENST00000439106 ZBTB12Q9Y330 459 aaPredicted RBP17.62■□□□□ 0.41
PRAME-209ENST00000439106 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
PRAME-209ENST00000439106 E9PSI1 815 aa17.61■□□□□ 0.41
PRAME-209ENST00000439106 PSMD14O00487 310 aa17.61■□□□□ 0.41
PRAME-209ENST00000439106 SLFN5Q08AF3 891 aa17.61■□□□□ 0.41
PRAME-209ENST00000439106 EYA3Q99504 573 aa17.61■□□□□ 0.41
PRAME-209ENST00000439106 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
PRAME-209ENST00000439106 ITGA6P23229 1130 aa17.6■□□□□ 0.41
PRAME-209ENST00000439106 CNTROBQ8N137 903 aa17.6■□□□□ 0.41
PRAME-209ENST00000439106 XDHP47989 1333 aa17.6■□□□□ 0.41
PRAME-209ENST00000439106 TNIP1Q15025 636 aa17.59■□□□□ 0.41
PRAME-209ENST00000439106 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
PRAME-209ENST00000439106 TRPM4Q8TD43 1214 aa17.59■□□□□ 0.41
PRAME-209ENST00000439106 MKRN1Q9UHC7 482 aaKnown RBP17.59■□□□□ 0.41
PRAME-209ENST00000439106 EPHA10Q5JZY3 1008 aa17.58■□□□□ 0.4
PRAME-209ENST00000439106 USP50Q70EL3 339 aaPredicted RBP17.58■□□□□ 0.4
PRAME-209ENST00000439106 MICALL2Q8IY33 904 aa17.58■□□□□ 0.4
PRAME-209ENST00000439106 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
PRAME-209ENST00000439106 ZC3H12CQ9C0D7 883 aaKnown RBP17.58■□□□□ 0.4
PRAME-209ENST00000439106 CREBZFQ9NS37 354 aa17.58■□□□□ 0.4
PRAME-209ENST00000439106 ADARB2Q9NS39 739 aaKnown RBP17.58■□□□□ 0.4
PRAME-209ENST00000439106 BSDC1Q9NW68 430 aaPredicted RBP17.58■□□□□ 0.4
PRAME-209ENST00000439106 MINPP1Q9UNW1 487 aa17.58■□□□□ 0.4
PRAME-209ENST00000439106 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.4
PRAME-209ENST00000439106 TRAF5O00463 557 aa17.57■□□□□ 0.4
PRAME-209ENST00000439106 CSF1RP07333 972 aa17.57■□□□□ 0.4
PRAME-209ENST00000439106 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
PRAME-209ENST00000439106 FOXO4P98177 505 aa17.57■□□□□ 0.4
PRAME-209ENST00000439106 CNOT7Q9UIV1 285 aaKnown RBP17.57■□□□□ 0.4
PRAME-209ENST00000439106 G3V3G9 751 aa17.56■□□□□ 0.4
PRAME-209ENST00000439106 GRM8O00222 908 aa17.56■□□□□ 0.4
PRAME-209ENST00000439106 ATP2B4P23634 1241 aa17.56■□□□□ 0.4
PRAME-209ENST00000439106 HIRAP54198 1017 aaPredicted RBP17.56■□□□□ 0.4
PRAME-209ENST00000439106 DCAF8Q5TAQ9 597 aa17.56■□□□□ 0.4
PRAME-209ENST00000439106 JMYQ8N9B5 988 aa17.56■□□□□ 0.4
PRAME-209ENST00000439106 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
PRAME-209ENST00000439106 EGFRP00533 1210 aa17.55■□□□□ 0.4
PRAME-209ENST00000439106 KLRK1P26718 216 aa17.55■□□□□ 0.4
PRAME-209ENST00000439106 CCT4P50991 539 aaKnown RBP17.55■□□□□ 0.4
PRAME-209ENST00000439106 SAMD7Q7Z3H4 446 aa17.55■□□□□ 0.4
PRAME-209ENST00000439106 MED23Q9ULK4 1368 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 TBC1D10BQ4KMP7 808 aaPredicted RBP17.54■□□□□ 0.4
PRAME-209ENST00000439106 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 TXNRD3Q86VQ6 643 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 MIER1Q8N108 512 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 SUCLG2Q96I99 432 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
PRAME-209ENST00000439106 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
PRAME-209ENST00000439106 GLIS2Q9BZE0 524 aaPredicted RBP17.54■□□□□ 0.4
PRAME-209ENST00000439106 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
PRAME-209ENST00000439106 SNAP23O00161 211 aa17.53■□□□□ 0.4
PRAME-209ENST00000439106 ALDH1L1O75891 902 aa17.53■□□□□ 0.4
PRAME-209ENST00000439106 NBPF7P0C2Y1 421 aaPredicted RBP17.53■□□□□ 0.4
PRAME-209ENST00000439106 CHRNDQ07001 517 aa17.53■□□□□ 0.4
PRAME-209ENST00000439106 RBM26Q5T8P6 1007 aaKnown RBP17.53■□□□□ 0.4
PRAME-209ENST00000439106 TRMT2AQ8IZ69 625 aaKnown RBP17.53■□□□□ 0.4
PRAME-209ENST00000439106 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
PRAME-209ENST00000439106 H7C1D1 291 aa17.52■□□□□ 0.4
PRAME-209ENST00000439106 TAF5LO75529 589 aa17.52■□□□□ 0.4
PRAME-209ENST00000439106 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.4
PRAME-209ENST00000439106 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.4
PRAME-209ENST00000439106 DLK2Q6UY11 383 aa17.52■□□□□ 0.4
PRAME-209ENST00000439106 HELBQ8NG08 1087 aaPredicted RBP17.52■□□□□ 0.4
PRAME-209ENST00000439106 DPF2Q92785 391 aa17.52■□□□□ 0.4
PRAME-209ENST00000439106 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
PRAME-209ENST00000439106 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.4
PRAME-209ENST00000439106 VIL1P09327 827 aaKnown RBP17.51■□□□□ 0.39
PRAME-209ENST00000439106 MXD3Q9BW11 206 aa17.51■□□□□ 0.39
PRAME-209ENST00000439106 ZNF804BA4D1E1 1349 aa17.5■□□□□ 0.39
PRAME-209ENST00000439106 PTPRCP08575 1304 aa17.5■□□□□ 0.39
PRAME-209ENST00000439106 RPS12P25398 132 aaKnown RBP17.5■□□□□ 0.39
PRAME-209ENST00000439106 FBXW7Q969H0 707 aa17.5■□□□□ 0.39
PRAME-209ENST00000439106 ABT1Q9ULW3 272 aaKnown RBP17.5■□□□□ 0.39
PRAME-209ENST00000439106 ASTN2O75129 1339 aaPredicted RBP17.49■□□□□ 0.39
PRAME-209ENST00000439106 VEGFBP49765 207 aa17.49■□□□□ 0.39
PRAME-209ENST00000439106 KIF4BQ2VIQ3 1234 aa17.49■□□□□ 0.39
PRAME-209ENST00000439106 CST9Q5W186 159 aa17.49■□□□□ 0.39
PRAME-209ENST00000439106 RSBN1LQ6PCB5 846 aaPredicted RBP17.49■□□□□ 0.39
PRAME-209ENST00000439106 ANKRD2Q9GZV1 360 aa17.49■□□□□ 0.39
PRAME-209ENST00000439106 ZNF408Q9H9D4 720 aa17.49■□□□□ 0.39
PRAME-209ENST00000439106 LEMD3Q9Y2U8 911 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms