RNA–Protein interactions for RNA: ENST00000438888.5

PRAME-208, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 4

Gene PRAME, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-208ENST00000438888 H7C1D1 291 aa15.93■□□□□ 0.14
PRAME-208ENST00000438888 PSMD14O00487 310 aa15.93■□□□□ 0.14
PRAME-208ENST00000438888 DLK2Q6UY11 383 aa15.93■□□□□ 0.14
PRAME-208ENST00000438888 TRMT2AQ8IZ69 625 aaKnown RBP15.93■□□□□ 0.14
PRAME-208ENST00000438888 JARID2Q92833 1246 aaPredicted RBP15.93■□□□□ 0.14
PRAME-208ENST00000438888 CCDC85AQ96PX6 553 aaPredicted RBP15.93■□□□□ 0.14
PRAME-208ENST00000438888 MYD88Q99836 296 aa15.93■□□□□ 0.14
PRAME-208ENST00000438888 POLLQ9UGP5 575 aa15.93■□□□□ 0.14
PRAME-208ENST00000438888 LRRC37AA6NMS7 1700 aa15.93■□□□□ 0.14
PRAME-208ENST00000438888 ECE2O60344 883 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 TBC1D10BQ4KMP7 808 aaPredicted RBP15.92■□□□□ 0.14
PRAME-208ENST00000438888 RBM26Q5T8P6 1007 aaKnown RBP15.92■□□□□ 0.14
PRAME-208ENST00000438888 SAMD7Q7Z3H4 446 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 SAPCD2Q86UD0 394 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 USP48Q86UV5 1035 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 SEC31BQ9NQW1 1179 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 THSD7BQ9C0I4 1608 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 TRPM7Q96QT4 1865 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 FANCIQ9NVI1 1328 aa15.92■□□□□ 0.14
PRAME-208ENST00000438888 RPS8P62241 208 aaKnown RBP15.91■□□□□ 0.14
PRAME-208ENST00000438888 CDC37L1Q7L3B6 337 aa15.91■□□□□ 0.14
PRAME-208ENST00000438888 ZC3H15Q8WU90 426 aaKnown RBP15.91■□□□□ 0.14
PRAME-208ENST00000438888 EYA3Q99504 573 aa15.91■□□□□ 0.14
PRAME-208ENST00000438888 KCNQ5Q9NR82 932 aa15.91■□□□□ 0.14
PRAME-208ENST00000438888 UFL1O94874 794 aa15.9■□□□□ 0.14
PRAME-208ENST00000438888 EGFRP00533 1210 aa15.9■□□□□ 0.14
PRAME-208ENST00000438888 ZBTB38Q8NAP3 1195 aaPredicted RBP15.9■□□□□ 0.14
PRAME-208ENST00000438888 TBC1D16Q8TBP0 767 aa15.9■□□□□ 0.14
PRAME-208ENST00000438888 TSR2Q969E8 191 aaKnown RBP15.9■□□□□ 0.14
PRAME-208ENST00000438888 PGAP2Q9UHJ9 254 aa15.9■□□□□ 0.14
PRAME-208ENST00000438888 RTL9Q8NET4 1388 aa15.89■□□□□ 0.13
PRAME-208ENST00000438888 G3V3G9 751 aa15.89■□□□□ 0.13
PRAME-208ENST00000438888 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
PRAME-208ENST00000438888 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
PRAME-208ENST00000438888 C8orf58Q8NAV2 365 aa15.89■□□□□ 0.13
PRAME-208ENST00000438888 ABHD8Q96I13 439 aa15.89■□□□□ 0.13
PRAME-208ENST00000438888 ANKIB1Q9P2G1 1089 aa15.89■□□□□ 0.13
PRAME-208ENST00000438888 KRT26Q7Z3Y9 468 aa15.88■□□□□ 0.13
PRAME-208ENST00000438888 DPF2Q92785 391 aa15.88■□□□□ 0.13
PRAME-208ENST00000438888 ZC3H12CQ9C0D7 883 aaKnown RBP15.88■□□□□ 0.13
PRAME-208ENST00000438888 CWC25Q9NXE8 425 aaPredicted RBP15.88■□□□□ 0.13
PRAME-208ENST00000438888 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
PRAME-208ENST00000438888 MAP2K2P36507 400 aa15.87■□□□□ 0.13
PRAME-208ENST00000438888 HUNKP57058 714 aa15.87■□□□□ 0.13
PRAME-208ENST00000438888 CCDC152Q4G0S7 254 aa15.87■□□□□ 0.13
PRAME-208ENST00000438888 GGA1Q9UJY5 639 aa15.87■□□□□ 0.13
PRAME-208ENST00000438888 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
PRAME-208ENST00000438888 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
PRAME-208ENST00000438888 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
PRAME-208ENST00000438888 KIF4BQ2VIQ3 1234 aa15.86■□□□□ 0.13
PRAME-208ENST00000438888 CCDC191Q8NCU4 936 aa15.86■□□□□ 0.13
PRAME-208ENST00000438888 DCPSQ96C86 337 aaKnown RBP15.86■□□□□ 0.13
PRAME-208ENST00000438888 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
PRAME-208ENST00000438888 PDE8AO60658 829 aa15.85■□□□□ 0.13
PRAME-208ENST00000438888 HSP90B1P14625 803 aaKnown RBP15.85■□□□□ 0.13
PRAME-208ENST00000438888 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
PRAME-208ENST00000438888 CCDC30Q5VVM6 783 aa15.85■□□□□ 0.13
PRAME-208ENST00000438888 TSPYL6Q8N831 410 aa15.85■□□□□ 0.13
PRAME-208ENST00000438888 HHIPL1Q96JK4 782 aa15.85■□□□□ 0.13
PRAME-208ENST00000438888 ZIC5Q96T25 663 aa15.85■□□□□ 0.13
PRAME-208ENST00000438888 METTL22Q9BUU2 404 aaPredicted RBP15.85■□□□□ 0.13
PRAME-208ENST00000438888 GGA3Q9NZ52 723 aa15.85■□□□□ 0.13
PRAME-208ENST00000438888 CCDC85CA6NKD9 419 aa15.84■□□□□ 0.13
PRAME-208ENST00000438888 BRPF1P55201 1214 aaPredicted RBP15.84■□□□□ 0.13
PRAME-208ENST00000438888 ANKRD18AQ8IVF6 992 aa15.84■□□□□ 0.13
PRAME-208ENST00000438888 GBA2Q9HCG7 927 aaPredicted RBP15.84■□□□□ 0.13
PRAME-208ENST00000438888 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
PRAME-208ENST00000438888 ASTN2O75129 1339 aaPredicted RBP15.84■□□□□ 0.13
PRAME-208ENST00000438888 PI4KAP2A4QPH2 592 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 VIL1P09327 827 aaKnown RBP15.82■□□□□ 0.12
PRAME-208ENST00000438888 CT47B1P0C2W7 299 aaPredicted RBP15.82■□□□□ 0.12
PRAME-208ENST00000438888 CTSWP56202 376 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 NOGQ13253 232 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 SULF1Q8IWU6 871 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 PI4KAP1Q8N8J0 262 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 C2orf69Q8N8R5 385 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 XDHP47989 1333 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 SCN9AQ15858 1988 aa15.82■□□□□ 0.12
PRAME-208ENST00000438888 CA12O43570 354 aa15.81■□□□□ 0.12
PRAME-208ENST00000438888 IGKV5-2P06315 115 aa15.81■□□□□ 0.12
PRAME-208ENST00000438888 CWF19L2Q2TBE0 894 aaKnown RBP15.81■□□□□ 0.12
PRAME-208ENST00000438888 RGMBQ6NW40 437 aa15.81■□□□□ 0.12
PRAME-208ENST00000438888 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
PRAME-208ENST00000438888 STK31Q9BXU1 1019 aa15.81■□□□□ 0.12
PRAME-208ENST00000438888 WTIPA6NIX2 430 aaPredicted RBP15.8■□□□□ 0.12
PRAME-208ENST00000438888 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
PRAME-208ENST00000438888 NEXNQ0ZGT2 675 aa15.8■□□□□ 0.12
PRAME-208ENST00000438888 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
PRAME-208ENST00000438888 ANGEL2Q5VTE6 544 aaKnown RBP15.8■□□□□ 0.12
PRAME-208ENST00000438888 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
PRAME-208ENST00000438888 FBXW7Q969H0 707 aa15.8■□□□□ 0.12
PRAME-208ENST00000438888 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
PRAME-208ENST00000438888 GREM2Q9H772 168 aa15.8■□□□□ 0.12
PRAME-208ENST00000438888 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
PRAME-208ENST00000438888 SCAF8Q9UPN6 1271 aaKnown RBP15.8■□□□□ 0.12
PRAME-208ENST00000438888 ATP2B4P23634 1241 aa15.79■□□□□ 0.12
PRAME-208ENST00000438888 SCARF1Q14162 830 aa15.79■□□□□ 0.12
PRAME-208ENST00000438888 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
PRAME-208ENST00000438888 G2E3Q7L622 706 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms