RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SP8Q8IXZ3 490 aa14.91□□□□□ -0.02
CSTF3-203ENST00000438862 MPNDQ8N594 471 aa14.91□□□□□ -0.02
CSTF3-203ENST00000438862 MAP3K15Q6ZN16 1313 aa14.91□□□□□ -0.02
CSTF3-203ENST00000438862 SUSD4Q5VX71 490 aa14.9□□□□□ -0.02
CSTF3-203ENST00000438862 KIF6Q6ZMV9 814 aa14.9□□□□□ -0.02
CSTF3-203ENST00000438862 SLC51AQ86UW1 340 aa14.9□□□□□ -0.02
CSTF3-203ENST00000438862 PDCD7Q8N8D1 485 aaKnown RBP14.9□□□□□ -0.02
CSTF3-203ENST00000438862 SHTN1A0MZ66 631 aa14.89□□□□□ -0.03
CSTF3-203ENST00000438862 CHRM1P11229 460 aaPredicted RBP14.89□□□□□ -0.03
CSTF3-203ENST00000438862 GPTP24298 496 aa14.89□□□□□ -0.03
CSTF3-203ENST00000438862 FBXO46Q6PJ61 603 aaPredicted RBP14.89□□□□□ -0.03
CSTF3-203ENST00000438862 SAMD7Q7Z3H4 446 aa14.89□□□□□ -0.03
CSTF3-203ENST00000438862 PPP1R42Q7Z4L9 355 aa14.89□□□□□ -0.03
CSTF3-203ENST00000438862 ZNF34Q8IZ26 560 aa14.89□□□□□ -0.03
CSTF3-203ENST00000438862 RTF1Q92541 710 aaKnown RBP14.89□□□□□ -0.03
CSTF3-203ENST00000438862 NOM1Q5C9Z4 860 aaKnown RBP14.88□□□□□ -0.03
CSTF3-203ENST00000438862 SLC10A5Q5PT55 438 aa14.88□□□□□ -0.03
CSTF3-203ENST00000438862 ZNF467Q7Z7K2 595 aaPredicted RBP14.88□□□□□ -0.03
CSTF3-203ENST00000438862 NGEFQ8N5V2 710 aa14.88□□□□□ -0.03
CSTF3-203ENST00000438862 ZNF296Q8WUU4 475 aaPredicted RBP14.88□□□□□ -0.03
CSTF3-203ENST00000438862 UBN2Q6ZU65 1347 aa14.88□□□□□ -0.03
CSTF3-203ENST00000438862 YDJCA8MPS7 323 aa14.87□□□□□ -0.03
CSTF3-203ENST00000438862 ADM5C9JUS6 153 aa14.87□□□□□ -0.03
CSTF3-203ENST00000438862 NTSR2O95665 410 aa14.87□□□□□ -0.03
CSTF3-203ENST00000438862 RPS12P25398 132 aaKnown RBP14.87□□□□□ -0.03
CSTF3-203ENST00000438862 TBC1D10BQ4KMP7 808 aaPredicted RBP14.87□□□□□ -0.03
CSTF3-203ENST00000438862 C3orf67Q6ZVT6 689 aa14.87□□□□□ -0.03
CSTF3-203ENST00000438862 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
CSTF3-203ENST00000438862 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
CSTF3-203ENST00000438862 ABCC4O15439 1325 aa14.87□□□□□ -0.03
CSTF3-203ENST00000438862 HSPA5P11021 654 aaKnown RBP14.86□□□□□ -0.03
CSTF3-203ENST00000438862 FKBP1BP68106 108 aa14.86□□□□□ -0.03
CSTF3-203ENST00000438862 PARP10Q53GL7 1025 aa14.86□□□□□ -0.03
CSTF3-203ENST00000438862 FXR1P51114 621 aaKnown RBP eCLIP14.85□□□□□ -0.03
CSTF3-203ENST00000438862 TAF7Q15545 349 aaPredicted RBP14.85□□□□□ -0.03
CSTF3-203ENST00000438862 GIGYF2Q6Y7W6 1299 aaKnown RBP14.85□□□□□ -0.03
CSTF3-203ENST00000438862 TTLL7Q6ZT98 887 aa14.85□□□□□ -0.03
CSTF3-203ENST00000438862 RASAL3Q86YV0 1011 aa14.85□□□□□ -0.03
CSTF3-203ENST00000438862 GPR25O00155 361 aa14.84□□□□□ -0.03
CSTF3-203ENST00000438862 PSMD14O00487 310 aa14.84□□□□□ -0.03
CSTF3-203ENST00000438862 HTATSF1O43719 755 aaKnown RBP14.84□□□□□ -0.03
CSTF3-203ENST00000438862 TBC1D8O95759 1140 aa14.84□□□□□ -0.03
CSTF3-203ENST00000438862 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
CSTF3-203ENST00000438862 RBM26Q5T8P6 1007 aaKnown RBP14.84□□□□□ -0.03
CSTF3-203ENST00000438862 INTS3Q68E01 1043 aaKnown RBP14.84□□□□□ -0.03
CSTF3-203ENST00000438862 MCM10Q7L590 875 aa14.84□□□□□ -0.03
CSTF3-203ENST00000438862 TMC4Q7Z404 712 aa14.84□□□□□ -0.03
CSTF3-203ENST00000438862 ZBTB3Q9H5J0 574 aa14.84□□□□□ -0.03
CSTF3-203ENST00000438862 RRP7AQ9Y3A4 280 aaKnown RBP14.84□□□□□ -0.03
CSTF3-203ENST00000438862 COL3A1P02461 1466 aaPredicted RBP14.83□□□□□ -0.03
CSTF3-203ENST00000438862 LAMB4A4D0S4 1761 aa14.83□□□□□ -0.03
CSTF3-203ENST00000438862 EGFRP00533 1210 aa14.83□□□□□ -0.04
CSTF3-203ENST00000438862 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.04
CSTF3-203ENST00000438862 TM4SF4P48230 202 aa14.83□□□□□ -0.04
CSTF3-203ENST00000438862 WASHC4Q2M389 1173 aa14.83□□□□□ -0.04
CSTF3-203ENST00000438862 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
CSTF3-203ENST00000438862 CDCA5Q96FF9 252 aa14.83□□□□□ -0.04
CSTF3-203ENST00000438862 UTP14AQ9BVJ6 771 aaKnown RBP14.83□□□□□ -0.04
CSTF3-203ENST00000438862 RSPH6AQ9H0K4 717 aa14.82□□□□□ -0.04
CSTF3-203ENST00000438862 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.82□□□□□ -0.04
CSTF3-203ENST00000438862 ANKRD36CQ5JPF3 1778 aa14.81□□□□□ -0.04
CSTF3-203ENST00000438862 FKTNO75072 461 aa14.81□□□□□ -0.04
CSTF3-203ENST00000438862 MYL6BP14649 208 aa14.81□□□□□ -0.04
CSTF3-203ENST00000438862 GRAPQ13588 217 aa14.81□□□□□ -0.04
CSTF3-203ENST00000438862 KIF4BQ2VIQ3 1234 aa14.81□□□□□ -0.04
CSTF3-203ENST00000438862 CC2D1BQ5T0F9 858 aaKnown RBP14.81□□□□□ -0.04
CSTF3-203ENST00000438862 GRAPLQ8TC17 118 aaPredicted RBP14.81□□□□□ -0.04
CSTF3-203ENST00000438862 GGA3Q9NZ52 723 aa14.81□□□□□ -0.04
CSTF3-203ENST00000438862 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
CSTF3-203ENST00000438862 PSEN1P49768 467 aa14.8□□□□□ -0.04
CSTF3-203ENST00000438862 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
CSTF3-203ENST00000438862 CFHR5Q9BXR6 569 aa14.8□□□□□ -0.04
CSTF3-203ENST00000438862 DCTN1Q14203 1278 aa14.79□□□□□ -0.04
CSTF3-203ENST00000438862 PNISRQ8TF01 805 aaKnown RBP14.79□□□□□ -0.04
CSTF3-203ENST00000438862 DBNDD1Q9H9R9 158 aa14.79□□□□□ -0.04
CSTF3-203ENST00000438862 PAPPA2Q9BXP8 1791 aa14.78□□□□□ -0.04
CSTF3-203ENST00000438862 SREBF2Q12772 1141 aa14.78□□□□□ -0.04
CSTF3-203ENST00000438862 MIS18AQ9NYP9 233 aa14.78□□□□□ -0.04
CSTF3-203ENST00000438862 ERBB4Q15303 1308 aa14.77□□□□□ -0.04
CSTF3-203ENST00000438862 ECE2O60344 883 aa14.77□□□□□ -0.05
CSTF3-203ENST00000438862 VIL1P09327 827 aaKnown RBP14.77□□□□□ -0.05
CSTF3-203ENST00000438862 MKRN3Q13064 507 aaKnown RBP14.77□□□□□ -0.05
CSTF3-203ENST00000438862 SCARF1Q14162 830 aa14.77□□□□□ -0.05
CSTF3-203ENST00000438862 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
CSTF3-203ENST00000438862 EYA3Q99504 573 aa14.77□□□□□ -0.05
CSTF3-203ENST00000438862 NSFL1CQ9UNZ2 370 aaKnown RBP14.77□□□□□ -0.05
CSTF3-203ENST00000438862 NUDCQ9Y266 331 aa14.77□□□□□ -0.05
CSTF3-203ENST00000438862 LAMB2P55268 1798 aa14.77□□□□□ -0.05
CSTF3-203ENST00000438862 DUOX1Q9NRD9 1551 aa14.77□□□□□ -0.05
CSTF3-203ENST00000438862 PITPNM2Q9BZ72 1349 aa14.76□□□□□ -0.05
CSTF3-203ENST00000438862 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
CSTF3-203ENST00000438862 RIMBP2O15034 1052 aa14.76□□□□□ -0.05
CSTF3-203ENST00000438862 HCLS1P14317 486 aaPredicted RBP14.76□□□□□ -0.05
CSTF3-203ENST00000438862 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
CSTF3-203ENST00000438862 ANGEL2Q5VTE6 544 aaKnown RBP14.76□□□□□ -0.05
CSTF3-203ENST00000438862 CFAP53Q96M91 514 aa14.76□□□□□ -0.05
CSTF3-203ENST00000438862 KCNQ5Q9NR82 932 aa14.76□□□□□ -0.05
CSTF3-203ENST00000438862 MKI67P46013 3256 aaKnown RBP14.76□□□□□ -0.05
CSTF3-203ENST00000438862 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
CSTF3-203ENST00000438862 ALDH1A1P00352 501 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms