RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TTC14Q96N46 770 aa16.63■□□□□ 0.25
PTCHD3-201ENST00000438700 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
PTCHD3-201ENST00000438700 EYA2O00167 538 aa16.63■□□□□ 0.25
PTCHD3-201ENST00000438700 ADCK5Q3MIX3 580 aa16.63■□□□□ 0.25
PTCHD3-201ENST00000438700 ZSCAN23Q3MJ62 389 aa16.63■□□□□ 0.25
PTCHD3-201ENST00000438700 SEPT12Q8IYM1 358 aa16.63■□□□□ 0.25
PTCHD3-201ENST00000438700 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 DTNBO60941 627 aa16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 CSF1RP07333 972 aa16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 IL15P40933 162 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 NMIQ13287 307 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 ONECUT3O60422 494 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 JAKMIP1Q96N16 626 aaKnown RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 RBSNQ9H1K0 784 aa16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 NSFL1CQ9UNZ2 370 aaKnown RBP16.62■□□□□ 0.25
PTCHD3-201ENST00000438700 TPM2P07951 284 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 DBNDD2Q9BQY9 259 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 BCORQ6W2J9 1755 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 CIAO1O76071 339 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 KCNJ4P48050 445 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 CTSWP56202 376 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 QTRT2Q9H974 415 aaKnown RBP16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 NDUFB9Q9Y6M9 179 aa16.61■□□□□ 0.25
PTCHD3-201ENST00000438700 A0A0D9SFI3 127 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 SUSD4Q5VX71 490 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 TTLL11Q8NHH1 800 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 LARGE1O95461 756 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 MSNP26038 577 aaKnown RBP16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 GREM2Q9H772 168 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 LIMCH1Q9UPQ0 1083 aa16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 RBM8AQ9Y5S9 174 aaKnown RBP16.6■□□□□ 0.25
PTCHD3-201ENST00000438700 OFD1O75665 1012 aa16.59■□□□□ 0.25
PTCHD3-201ENST00000438700 PDE8AO60658 829 aa16.59■□□□□ 0.25
PTCHD3-201ENST00000438700 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-201ENST00000438700 NIP7Q9Y221 180 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTCHD3-201ENST00000438700 ZNF609O15014 1411 aa16.59■□□□□ 0.25
PTCHD3-201ENST00000438700 ATP5JP18859 108 aa16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 ITGA6P23229 1130 aa16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 NECTIN1Q15223 517 aa16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 NEUROD6Q96NK8 337 aa16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 GPR108Q9NPR9 543 aa16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 CCNL1Q9UK58 526 aaPredicted RBP16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 LY75O60449 1722 aa16.58■□□□□ 0.25
PTCHD3-201ENST00000438700 RPAP1Q9BWH6 1393 aaPredicted RBP16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 ZNF445P59923 1031 aa16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 TIMM10P62072 90 aa16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 COL9A3Q14050 684 aaPredicted RBP16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 PDCL3Q9H2J4 239 aa16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 PDRG1Q9NUG6 133 aa16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 TCHHQ07283 1943 aa16.58■□□□□ 0.24
PTCHD3-201ENST00000438700 ZKSCAN1P17029 563 aaPredicted RBP16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 PARP10Q53GL7 1025 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 ARID3AQ99856 593 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 ZNF652Q9Y2D9 606 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 HIP1O00291 1037 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 ZNF589Q86UQ0 364 aaPredicted RBP16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
PTCHD3-201ENST00000438700 TAF1LQ8IZX4 1826 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 FAM13BQ9NYF5 915 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 SCN7AQ01118 1682 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 A0A1B0GUL7 405 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 CHGBP05060 677 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 MAP4K1Q92918 833 aa16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
PTCHD3-201ENST00000438700 SYCE3A1L190 88 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 BRWD3Q6RI45 1802 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 NTSR2O95665 410 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 RC3H1Q5TC82 1133 aaKnown RBP16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 VPS53Q5VIR6 699 aa16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 LDHAL6AQ6ZMR3 332 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms