RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 EREGO14944 169 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 PRPF40AO75400 957 aaKnown RBP6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 KIF4AO95239 1232 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 GHRHP01286 108 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 KRT76Q01546 638 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 TBC1D8BQ0IIM8 1120 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 NCAPG2Q86XI2 1143 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 GALNT12Q8IXK2 581 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 CHRDQ9H2X0 955 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 NLRP2Q9NX02 1062 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 PPP4R2Q9NY27 417 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 KLF15Q9UIH9 416 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 SALL4Q9UJQ4 1053 aa6.47□□□□□ -1.37
LSM1P1-201ENST00000438629 RBM47A0AV96 593 aaKnown RBP6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 GIPC1O14908 333 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 BCRP11274 1271 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 EPXP11678 715 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 ADH7P40394 386 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 FBXO33Q7Z6M2 555 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 ACDQ96AP0 544 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 CCDC74AQ96AQ1 378 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 ENAMQ9NRM1 1142 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 SLC6A14Q9UN76 642 aa6.46□□□□□ -1.38
LSM1P1-201ENST00000438629 ZBTB42B2RXF5 422 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 OIP5O43482 229 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 CYP2E1P05181 493 aaPredicted RBP6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 XPCQ01831 940 aaPredicted RBP6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 MAP3K10Q02779 954 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 KANK3Q6NY19 840 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 FAM35AQ86V20 835 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 FCHSD1Q86WN1 690 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 MICALL1Q8N3F8 863 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 GALNT6Q8NCL4 622 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 GIPC2Q8TF65 315 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 EDARADDQ8WWZ3 215 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 FRRS1LQ9P0K9 344 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 SPG7Q9UQ90 795 aa6.45□□□□□ -1.38
LSM1P1-201ENST00000438629 ELMSAN1Q6PJG2 1045 aa6.44□□□□□ -1.38
LSM1P1-201ENST00000438629 CACTIN-AS1Q8N1I8 211 aa6.44□□□□□ -1.38
LSM1P1-201ENST00000438629 CEP120Q8N960 986 aa6.44□□□□□ -1.38
LSM1P1-201ENST00000438629 TTC9Q92623 222 aa6.44□□□□□ -1.38
LSM1P1-201ENST00000438629 NSUN5Q96P11 429 aaKnown RBP6.44□□□□□ -1.38
LSM1P1-201ENST00000438629 MDFIQ99750 246 aa6.44□□□□□ -1.38
LSM1P1-201ENST00000438629 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
LSM1P1-201ENST00000438629 GADD45BO75293 160 aaPredicted RBP6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 SMNDC1O75940 238 aaKnown RBP eCLIP6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 CPB1P15086 417 aa6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 EIF2AK2P19525 551 aaKnown RBP6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 MLLT1Q03111 559 aaPredicted RBP6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 KIAA0319Q5VV43 1072 aa6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 USPL1Q5W0Q7 1092 aa6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 FOXD4L4Q8WXT5 416 aaPredicted RBP6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 SRCIN1Q9C0H9 1055 aa6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 TRAK1Q9UPV9 953 aa6.43□□□□□ -1.38
LSM1P1-201ENST00000438629 FAM177BA6PVY3 158 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 J3QW42 95 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 WIPF1O43516 503 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 RGS9O75916 674 aaPredicted RBP6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 POLR3DP05423 398 aaPredicted RBP6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 CELA2BP08218 269 aaPredicted RBP6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 ZNF16P17020 682 aaPredicted RBP6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 COL13A1Q5TAT6 717 aaPredicted RBP6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 HFE2Q6ZVN8 426 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 BTBD6Q96KE9 485 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 OSMRQ99650 979 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 ZFYVE1Q9HBF4 777 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 WWC3Q9ULE0 1092 aa6.42□□□□□ -1.38
LSM1P1-201ENST00000438629 A0A1W2PP55 124 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 AMPD1P23109 780 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 GNA15P30679 374 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 LCE2CQ5TA81 110 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 PSAPL1Q6NUJ1 521 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 LYPD4Q6UWN0 246 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 EPS8L3Q8TE67 593 aaKnown RBP6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 PLD4Q96BZ4 506 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 DUSP9Q99956 384 aaKnown RBP6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 PBX4Q9BYU1 374 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 EHD4Q9H223 541 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 NPHS2Q9NP85 383 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 DZANK1Q9NVP4 752 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 PARP2Q9UGN5 583 aa6.41□□□□□ -1.38
LSM1P1-201ENST00000438629 PIK3R2O00459 728 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 PSMD2Q13200 908 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 PERM1Q5SV97 790 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 TMC4Q7Z404 712 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 TMEM102Q8N9M5 508 aaPredicted RBP6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 NEDD1Q8NHV4 660 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 SMG9Q9H0W8 520 aaKnown RBP6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 LIN7BQ9HAP6 207 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 MRS2Q9HD23 443 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 AK5Q9Y6K8 562 aa6.4□□□□□ -1.38
LSM1P1-201ENST00000438629 PDE2AO00408 941 aaPredicted RBP6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 SORBS3O60504 671 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 LILRB5O75023 590 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 XRCC5P13010 732 aaKnown RBP6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 DAB2P98082 770 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 INSM1Q01101 510 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms