RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 TAF5LO75529 589 aa23.73■■□□□ 1.39
CHRNA7-202ENST00000437966 GORABQ5T7V8 394 aa23.73■■□□□ 1.39
CHRNA7-202ENST00000437966 IGHMBP2P38935 993 aaKnown RBP23.72■■□□□ 1.39
CHRNA7-202ENST00000437966 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
CHRNA7-202ENST00000437966 HAUS7Q99871 368 aa23.72■■□□□ 1.39
CHRNA7-202ENST00000437966 FSD1Q9BTV5 496 aa23.72■■□□□ 1.39
CHRNA7-202ENST00000437966 ANO2Q9NQ90 1003 aa23.72■■□□□ 1.39
CHRNA7-202ENST00000437966 DIAPH3Q9NSV4 1193 aa23.72■■□□□ 1.39
CHRNA7-202ENST00000437966 LAMB2P55268 1798 aa23.71■■□□□ 1.39
CHRNA7-202ENST00000437966 EIF5BO60841 1220 aaKnown RBP23.71■■□□□ 1.39
CHRNA7-202ENST00000437966 PDE8BO95263 885 aa23.71■■□□□ 1.39
CHRNA7-202ENST00000437966 RTL9Q8NET4 1388 aa23.71■■□□□ 1.39
CHRNA7-202ENST00000437966 DDX46Q7L014 1031 aaKnown RBP23.7■■□□□ 1.39
CHRNA7-202ENST00000437966 AKT1S1Q96B36 256 aa23.7■■□□□ 1.39
CHRNA7-202ENST00000437966 NLRP3Q96P20 1036 aa23.7■■□□□ 1.39
CHRNA7-202ENST00000437966 COL24A1Q17RW2 1714 aa23.7■■□□□ 1.38
CHRNA7-202ENST00000437966 MROH5Q6ZUA9 1318 aa23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 SGSM2O43147 1006 aa23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 CHGBP05060 677 aa23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 IFIT1P09914 478 aaKnown RBP23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 TTC39AQ5SRH9 613 aa23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 FAM227BQ96M60 508 aa23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 SNRKQ9NRH2 765 aa23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 DAXXQ9UER7 740 aaPredicted RBP23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 CARMIL3Q8ND23 1372 aa23.69■■□□□ 1.38
CHRNA7-202ENST00000437966 GOLIM4O00461 696 aa23.68■■□□□ 1.38
CHRNA7-202ENST00000437966 NMIQ13287 307 aaPredicted RBP23.68■■□□□ 1.38
CHRNA7-202ENST00000437966 CCDC158Q5M9N0 1113 aa23.68■■□□□ 1.38
CHRNA7-202ENST00000437966 CELF1Q92879 486 aaKnown RBP23.68■■□□□ 1.38
CHRNA7-202ENST00000437966 COL23A1Q86Y22 540 aaPredicted RBP23.68■■□□□ 1.38
CHRNA7-202ENST00000437966 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
CHRNA7-202ENST00000437966 SPEF2Q9C093 1822 aa23.67■■□□□ 1.38
CHRNA7-202ENST00000437966 LRP5O75197 1615 aa23.67■■□□□ 1.38
CHRNA7-202ENST00000437966 TAF1P21675 1872 aa23.67■■□□□ 1.38
CHRNA7-202ENST00000437966 TM4SF1P30408 202 aa23.67■■□□□ 1.38
CHRNA7-202ENST00000437966 SCARF1Q14162 830 aa23.67■■□□□ 1.38
CHRNA7-202ENST00000437966 ANKRD18AQ8IVF6 992 aa23.67■■□□□ 1.38
CHRNA7-202ENST00000437966 CNBD1Q8NA66 436 aa23.67■■□□□ 1.38
CHRNA7-202ENST00000437966 EN1Q05925 392 aaPredicted RBP23.66■■□□□ 1.38
CHRNA7-202ENST00000437966 EZH2Q15910 746 aaKnown RBP23.66■■□□□ 1.38
CHRNA7-202ENST00000437966 TBC1D2Q9BYX2 928 aa23.66■■□□□ 1.38
CHRNA7-202ENST00000437966 SERPINB2P05120 415 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 FKBP4Q02790 459 aaKnown RBP eCLIP23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 CHRNDQ07001 517 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 PUM3Q15397 648 aaKnown RBP23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 PRR5LQ6MZQ0 368 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 ANTXR1Q9H6X2 564 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 PAG1Q9NWQ8 432 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 TNS1Q9HBL0 1735 aaKnown RBP23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 A0A0D9SFI3 127 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 FGFR2P21802 821 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 DDR1Q08345 913 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 SLFNL1Q499Z3 407 aa23.65■■□□□ 1.38
CHRNA7-202ENST00000437966 WTIPA6NIX2 430 aaPredicted RBP23.64■■□□□ 1.37
CHRNA7-202ENST00000437966 PI16Q6UXB8 463 aa23.64■■□□□ 1.37
CHRNA7-202ENST00000437966 RUFY2Q8WXA3 655 aa23.64■■□□□ 1.37
CHRNA7-202ENST00000437966 LSG1Q9H089 658 aaKnown RBP23.64■■□□□ 1.37
CHRNA7-202ENST00000437966 CASZ1Q86V15 1759 aa23.64■■□□□ 1.37
CHRNA7-202ENST00000437966 BECN1Q14457 450 aa23.63■■□□□ 1.37
CHRNA7-202ENST00000437966 LPIN2Q92539 896 aa23.63■■□□□ 1.37
CHRNA7-202ENST00000437966 PHKA1P46020 1223 aa23.63■■□□□ 1.37
CHRNA7-202ENST00000437966 PALD1Q9ULE6 856 aa23.63■■□□□ 1.37
CHRNA7-202ENST00000437966 HIP1O00291 1037 aa23.62■■□□□ 1.37
CHRNA7-202ENST00000437966 ZAP70P43403 619 aa23.62■■□□□ 1.37
CHRNA7-202ENST00000437966 PTH1RQ03431 593 aa23.62■■□□□ 1.37
CHRNA7-202ENST00000437966 ERICH6Q7L0X2 663 aa23.62■■□□□ 1.37
CHRNA7-202ENST00000437966 KBTBD3Q8NAB2 608 aa23.62■■□□□ 1.37
CHRNA7-202ENST00000437966 BSDC1Q9NW68 430 aaPredicted RBP23.62■■□□□ 1.37
CHRNA7-202ENST00000437966 TNRC6CQ9HCJ0 1690 aaKnown RBP23.62■■□□□ 1.37
CHRNA7-202ENST00000437966 SLC5A1P13866 664 aa23.61■■□□□ 1.37
CHRNA7-202ENST00000437966 RPS8P62241 208 aaKnown RBP23.61■■□□□ 1.37
CHRNA7-202ENST00000437966 CCDC102BQ68D86 513 aa23.61■■□□□ 1.37
CHRNA7-202ENST00000437966 KIAA1211Q6ZU35 1233 aa23.61■■□□□ 1.37
CHRNA7-202ENST00000437966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.61■■□□□ 1.37
CHRNA7-202ENST00000437966 MINPP1Q9UNW1 487 aa23.61■■□□□ 1.37
CHRNA7-202ENST00000437966 POLRMTO00411 1230 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 HMGB2P26583 209 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 MCAMP43121 646 aa23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 SLC51AQ86UW1 340 aa23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 CAMKK2Q96RR4 588 aa23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 SEC62Q99442 399 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 CD2BP2O95400 341 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 SPRYD3Q8NCJ5 442 aa23.6■■□□□ 1.37
CHRNA7-202ENST00000437966 PNPLA7Q6ZV29 1317 aa23.59■■□□□ 1.37
CHRNA7-202ENST00000437966 ZNF589Q86UQ0 364 aaPredicted RBP23.59■■□□□ 1.37
CHRNA7-202ENST00000437966 MCCP23508 829 aa23.58■■□□□ 1.37
CHRNA7-202ENST00000437966 MSL1Q68DK7 614 aa23.58■■□□□ 1.37
CHRNA7-202ENST00000437966 CCDC129Q6ZRS4 1044 aa23.58■■□□□ 1.37
CHRNA7-202ENST00000437966 ANO8Q9HCE9 1232 aaPredicted RBP23.58■■□□□ 1.37
CHRNA7-202ENST00000437966 BCAMP50895 628 aa23.57■■□□□ 1.36
CHRNA7-202ENST00000437966 ST5P78524 1137 aa23.57■■□□□ 1.36
CHRNA7-202ENST00000437966 RAD50Q92878 1312 aa23.57■■□□□ 1.36
CHRNA7-202ENST00000437966 HSPA4P34932 840 aa23.55■■□□□ 1.36
CHRNA7-202ENST00000437966 RABEP1Q15276 862 aa23.55■■□□□ 1.36
CHRNA7-202ENST00000437966 DEFB132Q7Z7B7 95 aa23.55■■□□□ 1.36
CHRNA7-202ENST00000437966 HSCBQ8IWL3 235 aa23.55■■□□□ 1.36
CHRNA7-202ENST00000437966 NLGN1Q8N2Q7 840 aa23.55■■□□□ 1.36
CHRNA7-202ENST00000437966 FLAD1Q8NFF5 587 aa23.55■■□□□ 1.36
CHRNA7-202ENST00000437966 CYP2E1P05181 493 aaPredicted RBP23.54■■□□□ 1.36
CHRNA7-202ENST00000437966 ARID4AP29374 1257 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms