RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 MROH5Q6ZUA9 1318 aa18.26■□□□□ 0.51
SKA2-202ENST00000437036 YBX3P16989 372 aaKnown RBP eCLIP18.26■□□□□ 0.514e-8■□□□□ 8.4
SKA2-202ENST00000437036 OS9Q13438 667 aaPredicted RBP18.26■□□□□ 0.51
SKA2-202ENST00000437036 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
SKA2-202ENST00000437036 ARHGAP27Q6ZUM4 889 aa18.26■□□□□ 0.51
SKA2-202ENST00000437036 SIL1Q9H173 461 aa18.26■□□□□ 0.51
SKA2-202ENST00000437036 NSFL1CQ9UNZ2 370 aaKnown RBP18.26■□□□□ 0.51
SKA2-202ENST00000437036 PA2G4Q9UQ80 394 aaKnown RBP18.26■□□□□ 0.51
SKA2-202ENST00000437036 BRCA1P38398 1863 aaKnown RBP18.26■□□□□ 0.51
SKA2-202ENST00000437036 XDHP47989 1333 aa18.25■□□□□ 0.51
SKA2-202ENST00000437036 SURF6O75683 361 aaKnown RBP18.25■□□□□ 0.51
SKA2-202ENST00000437036 IL15P40933 162 aaPredicted RBP18.25■□□□□ 0.51
SKA2-202ENST00000437036 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
SKA2-202ENST00000437036 METTL24Q5JXM2 366 aa18.25■□□□□ 0.51
SKA2-202ENST00000437036 SUPT20HQ8NEM7 779 aa18.25■□□□□ 0.51
SKA2-202ENST00000437036 PUS3Q9BZE2 481 aaKnown RBP18.25■□□□□ 0.51
SKA2-202ENST00000437036 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
SKA2-202ENST00000437036 PCDHB15Q9Y5E8 787 aa18.25■□□□□ 0.51
SKA2-202ENST00000437036 GPSM2P81274 684 aa18.24■□□□□ 0.51
SKA2-202ENST00000437036 CHRNDQ07001 517 aa18.24■□□□□ 0.51
SKA2-202ENST00000437036 LRRC24Q50LG9 513 aa18.24■□□□□ 0.51
SKA2-202ENST00000437036 OLFM4Q6UX06 510 aa18.24■□□□□ 0.51
SKA2-202ENST00000437036 SIRT2Q8IXJ6 389 aa18.24■□□□□ 0.51
SKA2-202ENST00000437036 PODXL2Q9NZ53 605 aa18.24■□□□□ 0.51
SKA2-202ENST00000437036 TAF1P21675 1872 aa18.24■□□□□ 0.51
SKA2-202ENST00000437036 CACNA1SQ13698 1873 aa18.23■□□□□ 0.51
SKA2-202ENST00000437036 ATP2B4P23634 1241 aa18.23■□□□□ 0.51
SKA2-202ENST00000437036 KCNJ4P48050 445 aa18.23■□□□□ 0.51
SKA2-202ENST00000437036 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
SKA2-202ENST00000437036 CEP126Q9P2H0 1117 aa18.23■□□□□ 0.51
SKA2-202ENST00000437036 GGA1Q9UJY5 639 aa18.23■□□□□ 0.51
SKA2-202ENST00000437036 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
SKA2-202ENST00000437036 NOP58Q9Y2X3 529 aaKnown RBP18.23■□□□□ 0.51
SKA2-202ENST00000437036 C6orf229H3BNL8 230 aa18.22■□□□□ 0.51
SKA2-202ENST00000437036 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
SKA2-202ENST00000437036 ERC1Q8IUD2 1116 aa18.22■□□□□ 0.51
SKA2-202ENST00000437036 PSMD1Q99460 953 aa18.22■□□□□ 0.51
SKA2-202ENST00000437036 RWDD1Q9H446 243 aaPredicted RBP18.22■□□□□ 0.51
SKA2-202ENST00000437036 ARFGEF1Q9Y6D6 1849 aa18.21■□□□□ 0.51
SKA2-202ENST00000437036 UFL1O94874 794 aa18.21■□□□□ 0.51
SKA2-202ENST00000437036 ATG9AQ7Z3C6 839 aa18.21■□□□□ 0.51
SKA2-202ENST00000437036 HELBQ8NG08 1087 aaPredicted RBP18.21■□□□□ 0.51
SKA2-202ENST00000437036 EYA3Q99504 573 aa18.21■□□□□ 0.51
SKA2-202ENST00000437036 COL4A1P02462 1669 aa18.21■□□□□ 0.51
SKA2-202ENST00000437036 LTBP3Q9NS15 1303 aa18.21■□□□□ 0.51
SKA2-202ENST00000437036 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
SKA2-202ENST00000437036 PDE8BO95263 885 aa18.2■□□□□ 0.5
SKA2-202ENST00000437036 HDAC1Q13547 482 aaPredicted RBP18.2■□□□□ 0.5
SKA2-202ENST00000437036 TBC1D16Q8TBP0 767 aa18.2■□□□□ 0.5
SKA2-202ENST00000437036 RTFDC1Q9BY42 306 aaPredicted RBP18.2■□□□□ 0.5
SKA2-202ENST00000437036 NFKBIEO00221 500 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 TAF5LO75529 589 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 UBE4AQ14139 1066 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 SLC51AQ86UW1 340 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 VPS33BQ9H267 617 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
SKA2-202ENST00000437036 LRRC37AA6NMS7 1700 aa18.18■□□□□ 0.5
SKA2-202ENST00000437036 PUM3Q15397 648 aaKnown RBP18.18■□□□□ 0.5
SKA2-202ENST00000437036 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
SKA2-202ENST00000437036 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
SKA2-202ENST00000437036 ZC3H12CQ9C0D7 883 aaKnown RBP18.18■□□□□ 0.5
SKA2-202ENST00000437036 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
SKA2-202ENST00000437036 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
SKA2-202ENST00000437036 IFIT1P09914 478 aaKnown RBP18.17■□□□□ 0.5
SKA2-202ENST00000437036 LMNB1P20700 586 aa18.17■□□□□ 0.5
SKA2-202ENST00000437036 RASSF7Q02833 373 aa18.17■□□□□ 0.5
SKA2-202ENST00000437036 TFCP2Q12800 502 aa18.17■□□□□ 0.5
SKA2-202ENST00000437036 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
SKA2-202ENST00000437036 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
SKA2-202ENST00000437036 SNED1Q8TER0 1413 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 G3V3G9 751 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 PPIP5K2O43314 1243 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 SLC5A1P13866 664 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 IARSP41252 1262 aaKnown RBP18.16■□□□□ 0.5
SKA2-202ENST00000437036 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 DCAF8Q5TAQ9 597 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 VGLL2Q8N8G2 317 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 LPIN2Q92539 896 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 GCC1Q96CN9 775 aa18.16■□□□□ 0.5
SKA2-202ENST00000437036 ZBTB47Q9UFB7 747 aaPredicted RBP18.16■□□□□ 0.5
SKA2-202ENST00000437036 APBB1O00213 710 aa18.15■□□□□ 0.5
SKA2-202ENST00000437036 SASH1O94885 1247 aa18.15■□□□□ 0.5
SKA2-202ENST00000437036 GPR108Q9NPR9 543 aa18.15■□□□□ 0.5
SKA2-202ENST00000437036 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
SKA2-202ENST00000437036 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
SKA2-202ENST00000437036 KIAA2012Q0VF49 1180 aa18.14■□□□□ 0.49
SKA2-202ENST00000437036 RHPN1Q8TCX5 695 aa18.14■□□□□ 0.49
SKA2-202ENST00000437036 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
SKA2-202ENST00000437036 LRRCC1Q9C099 1032 aa18.14■□□□□ 0.49
SKA2-202ENST00000437036 MED23Q9ULK4 1368 aa18.14■□□□□ 0.49
SKA2-202ENST00000437036 SNAP23O00161 211 aa18.13■□□□□ 0.49
SKA2-202ENST00000437036 FGFR2P21802 821 aa18.13■□□□□ 0.49
SKA2-202ENST00000437036 AOC3Q16853 763 aa18.13■□□□□ 0.49
SKA2-202ENST00000437036 CAVIN4Q5BKX8 364 aa18.13■□□□□ 0.49
SKA2-202ENST00000437036 C15orf52Q6ZUT6 534 aaKnown RBP18.13■□□□□ 0.49
SKA2-202ENST00000437036 NIM1KQ8IY84 436 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms