RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 DDX10Q13206 875 aaKnown RBP23.86■■□□□ 1.41
UBXN1-203ENST00000436354 TRIM28Q13263 835 aaKnown RBP23.86■■□□□ 1.41
UBXN1-203ENST00000436354 DOK7Q18PE1 504 aa23.86■■□□□ 1.41
UBXN1-203ENST00000436354 RTL5Q5HYW3 569 aaPredicted RBP23.86■■□□□ 1.41
UBXN1-203ENST00000436354 CCDC146Q8IYE0 955 aa23.86■■□□□ 1.41
UBXN1-203ENST00000436354 ZC3H12CQ9C0D7 883 aaKnown RBP23.86■■□□□ 1.41
UBXN1-203ENST00000436354 KCNQ5Q9NR82 932 aa23.86■■□□□ 1.41
UBXN1-203ENST00000436354 RTL9Q8NET4 1388 aa23.86■■□□□ 1.41
UBXN1-203ENST00000436354 ADM5C9JUS6 153 aa23.85■■□□□ 1.41
UBXN1-203ENST00000436354 IRS4O14654 1257 aaPredicted RBP23.85■■□□□ 1.41
UBXN1-203ENST00000436354 TBC1D16Q8TBP0 767 aa23.85■■□□□ 1.41
UBXN1-203ENST00000436354 SAGE1Q9NXZ1 904 aa23.85■■□□□ 1.41
UBXN1-203ENST00000436354 TRIM35Q9UPQ4 493 aa23.85■■□□□ 1.41
UBXN1-203ENST00000436354 RUNDC1Q96C34 613 aa23.84■■□□□ 1.41
UBXN1-203ENST00000436354 COL4A1P02462 1669 aa23.83■■□□□ 1.41
UBXN1-203ENST00000436354 HSP90B1P14625 803 aaKnown RBP23.83■■□□□ 1.41
UBXN1-203ENST00000436354 ZNF157P51786 506 aaPredicted RBP23.83■■□□□ 1.41
UBXN1-203ENST00000436354 KIF23Q02241 960 aaPredicted RBP23.83■■□□□ 1.41
UBXN1-203ENST00000436354 KIF4BQ2VIQ3 1234 aa23.83■■□□□ 1.41
UBXN1-203ENST00000436354 SULF1Q8IWU6 871 aa23.83■■□□□ 1.41
UBXN1-203ENST00000436354 G3V3G9 751 aa23.82■■□□□ 1.4
UBXN1-203ENST00000436354 VIL1P09327 827 aaKnown RBP23.82■■□□□ 1.4
UBXN1-203ENST00000436354 DCAF8Q5TAQ9 597 aa23.82■■□□□ 1.4
UBXN1-203ENST00000436354 PODXL2Q9NZ53 605 aa23.82■■□□□ 1.4
UBXN1-203ENST00000436354 GGA3Q9NZ52 723 aa23.81■■□□□ 1.4
UBXN1-203ENST00000436354 AKAP11Q9UKA4 1901 aa23.8■■□□□ 1.4
UBXN1-203ENST00000436354 SCN9AQ15858 1988 aa23.8■■□□□ 1.4
UBXN1-203ENST00000436354 DUSP27Q5VZP5 1158 aa23.8■■□□□ 1.4
UBXN1-203ENST00000436354 RIC3Q7Z5B4 369 aa23.8■■□□□ 1.4
UBXN1-203ENST00000436354 ZBTB38Q8NAP3 1195 aaPredicted RBP23.8■■□□□ 1.4
UBXN1-203ENST00000436354 ANKIB1Q9P2G1 1089 aa23.8■■□□□ 1.4
UBXN1-203ENST00000436354 UFL1O94874 794 aa23.79■■□□□ 1.4
UBXN1-203ENST00000436354 WDR43Q15061 677 aaKnown RBP eCLIP23.79■■□□□ 1.4
UBXN1-203ENST00000436354 RNF186Q9NXI6 227 aa23.79■■□□□ 1.4
UBXN1-203ENST00000436354 MYBBP1AQ9BQG0 1328 aaKnown RBP23.79■■□□□ 1.4
UBXN1-203ENST00000436354 TRPA1O75762 1119 aa23.78■■□□□ 1.4
UBXN1-203ENST00000436354 SLC10A3P09131 477 aa23.78■■□□□ 1.4
UBXN1-203ENST00000436354 GOLGA2Q08379 1002 aa23.78■■□□□ 1.4
UBXN1-203ENST00000436354 GGA1Q9UJY5 639 aa23.78■■□□□ 1.4
UBXN1-203ENST00000436354 AGBL3Q8NEM8 1001 aa23.77■■□□□ 1.4
UBXN1-203ENST00000436354 CDCA5Q96FF9 252 aa23.77■■□□□ 1.4
UBXN1-203ENST00000436354 SEC31BQ9NQW1 1179 aa23.77■■□□□ 1.4
UBXN1-203ENST00000436354 ZNF609O15014 1411 aa23.76■■□□□ 1.39
UBXN1-203ENST00000436354 ZNF280AP59817 542 aaPredicted RBP23.76■■□□□ 1.39
UBXN1-203ENST00000436354 CCDC152Q4G0S7 254 aa23.76■■□□□ 1.39
UBXN1-203ENST00000436354 RSBN1LQ6PCB5 846 aaPredicted RBP23.76■■□□□ 1.39
UBXN1-203ENST00000436354 REM2Q8IYK8 340 aaPredicted RBP23.76■■□□□ 1.39
UBXN1-203ENST00000436354 CSRNP1Q96S65 589 aa23.76■■□□□ 1.39
UBXN1-203ENST00000436354 ASTN2O75129 1339 aaPredicted RBP23.76■■□□□ 1.39
UBXN1-203ENST00000436354 SCARF1Q14162 830 aa23.75■■□□□ 1.39
UBXN1-203ENST00000436354 ANGEL2Q5VTE6 544 aaKnown RBP23.75■■□□□ 1.39
UBXN1-203ENST00000436354 MBIPQ9NS73 344 aa23.75■■□□□ 1.39
UBXN1-203ENST00000436354 PSME4Q14997 1843 aa23.75■■□□□ 1.39
UBXN1-203ENST00000436354 PDE8AO60658 829 aa23.74■■□□□ 1.39
UBXN1-203ENST00000436354 CCDC191Q8NCU4 936 aa23.74■■□□□ 1.39
UBXN1-203ENST00000436354 PCCAP05165 728 aaPredicted RBP23.73■■□□□ 1.39
UBXN1-203ENST00000436354 FKBP1BP68106 108 aa23.73■■□□□ 1.39
UBXN1-203ENST00000436354 MYD88Q99836 296 aa23.73■■□□□ 1.39
UBXN1-203ENST00000436354 PHAXQ9H814 394 aaKnown RBP23.73■■□□□ 1.39
UBXN1-203ENST00000436354 ADAMTS8Q9UP79 889 aa23.73■■□□□ 1.39
UBXN1-203ENST00000436354 USP17L8P0C7I0 530 aa23.72■■□□□ 1.39
UBXN1-203ENST00000436354 XDHP47989 1333 aa23.72■■□□□ 1.39
UBXN1-203ENST00000436354 PITPNM2Q9BZ72 1349 aa23.71■■□□□ 1.39
UBXN1-203ENST00000436354 ANKRD18AQ8IVF6 992 aa23.71■■□□□ 1.39
UBXN1-203ENST00000436354 MYOZ2Q9NPC6 264 aa23.71■■□□□ 1.39
UBXN1-203ENST00000436354 CWC25Q9NXE8 425 aaPredicted RBP23.71■■□□□ 1.39
UBXN1-203ENST00000436354 PAPPA2Q9BXP8 1791 aa23.7■■□□□ 1.39
UBXN1-203ENST00000436354 USP17L3A6NCW0 530 aa23.7■■□□□ 1.38
UBXN1-203ENST00000436354 USP17L4A6NCW7 530 aa23.7■■□□□ 1.38
UBXN1-203ENST00000436354 ZNF853P0CG23 659 aa23.7■■□□□ 1.38
UBXN1-203ENST00000436354 USP17L1Q7RTZ2 530 aa23.7■■□□□ 1.38
UBXN1-203ENST00000436354 PODNQ7Z5L7 613 aa23.7■■□□□ 1.38
UBXN1-203ENST00000436354 CTU1Q7Z7A3 348 aaKnown RBP23.7■■□□□ 1.38
UBXN1-203ENST00000436354 RASAL3Q86YV0 1011 aa23.7■■□□□ 1.38
UBXN1-203ENST00000436354 GMLQ99445 158 aa23.7■■□□□ 1.38
UBXN1-203ENST00000436354 ATP2B4P23634 1241 aa23.69■■□□□ 1.38
UBXN1-203ENST00000436354 CCDC85AQ96PX6 553 aaPredicted RBP23.69■■□□□ 1.38
UBXN1-203ENST00000436354 TNRC18O15417 2968 aaPredicted RBP23.69■■□□□ 1.38
UBXN1-203ENST00000436354 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
UBXN1-203ENST00000436354 DDX58O95786 925 aaKnown RBP23.68■■□□□ 1.38
UBXN1-203ENST00000436354 SOX10P56693 466 aa23.68■■□□□ 1.38
UBXN1-203ENST00000436354 GNAI1P63096 354 aa23.68■■□□□ 1.38
UBXN1-203ENST00000436354 CALD1Q05682 793 aaKnown RBP23.68■■□□□ 1.38
UBXN1-203ENST00000436354 IFT57Q9NWB7 429 aa23.68■■□□□ 1.38
UBXN1-203ENST00000436354 JARID2Q92833 1246 aaPredicted RBP23.67■■□□□ 1.38
UBXN1-203ENST00000436354 METTL22Q9BUU2 404 aaPredicted RBP23.67■■□□□ 1.38
UBXN1-203ENST00000436354 CHMP4AQ9BY43 222 aa23.67■■□□□ 1.38
UBXN1-203ENST00000436354 CDC5LQ99459 802 aaKnown RBP23.66■■□□□ 1.38
UBXN1-203ENST00000436354 PCDH10Q9P2E7 1040 aa23.66■■□□□ 1.38
UBXN1-203ENST00000436354 CCDC30Q5VVM6 783 aa23.63■■□□□ 1.37
UBXN1-203ENST00000436354 MOB2Q70IA6 237 aa23.63■■□□□ 1.37
UBXN1-203ENST00000436354 OGFOD1Q8N543 542 aa23.63■■□□□ 1.37
UBXN1-203ENST00000436354 MED23Q9ULK4 1368 aa23.63■■□□□ 1.37
UBXN1-203ENST00000436354 UBE2Q2LH0YL09 131 aa23.62■■□□□ 1.37
UBXN1-203ENST00000436354 CTSWP56202 376 aa23.62■■□□□ 1.37
UBXN1-203ENST00000436354 PKN2Q16513 984 aaKnown RBP23.62■■□□□ 1.37
UBXN1-203ENST00000436354 NBPF9Q3BBW0 867 aa23.62■■□□□ 1.37
UBXN1-203ENST00000436354 C8orf58Q8NAV2 365 aa23.62■■□□□ 1.37
UBXN1-203ENST00000436354 BSDC1Q9NW68 430 aaPredicted RBP23.62■■□□□ 1.37
UBXN1-203ENST00000436354 HDAC9Q9UKV0 1011 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms