RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 RTL9Q8NET4 1388 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 SCN9AQ15858 1988 aa13.82□□□□□ -0.2
CPNE1-214ENST00000435747 DDX46Q7L014 1031 aaKnown RBP13.82□□□□□ -0.2
CPNE1-214ENST00000435747 ZBTB3Q9H5J0 574 aa13.82□□□□□ -0.2
CPNE1-214ENST00000435747 KCNQ5Q9NR82 932 aa13.82□□□□□ -0.2
CPNE1-214ENST00000435747 NF2P35240 595 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 GRAPQ13588 217 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 PARP10Q53GL7 1025 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 SLC10A5Q5PT55 438 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 TTLL7Q6ZT98 887 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 ZNF34Q8IZ26 560 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-214ENST00000435747 COL25A1Q9BXS0 654 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-214ENST00000435747 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 LRRC37AA6NMS7 1700 aa13.81□□□□□ -0.2
CPNE1-214ENST00000435747 VIL1P09327 827 aaKnown RBP13.8□□□□□ -0.2
CPNE1-214ENST00000435747 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
CPNE1-214ENST00000435747 SLC9C1Q4G0N8 1177 aa13.8□□□□□ -0.2
CPNE1-214ENST00000435747 PRAMEF18Q5VWM3 479 aa13.8□□□□□ -0.2
CPNE1-214ENST00000435747 TMC4Q7Z404 712 aa13.8□□□□□ -0.2
CPNE1-214ENST00000435747 IFNL1Q8IU54 200 aa13.8□□□□□ -0.2
CPNE1-214ENST00000435747 PHACTR3Q96KR7 559 aa13.8□□□□□ -0.2
CPNE1-214ENST00000435747 UTP14AQ9BVJ6 771 aaKnown RBP13.8□□□□□ -0.2
CPNE1-214ENST00000435747 SCAF8Q9UPN6 1271 aaKnown RBP13.8□□□□□ -0.2
CPNE1-214ENST00000435747 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
CPNE1-214ENST00000435747 MANSC4A6NHS7 340 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-214ENST00000435747 C6orf229H3BNL8 230 aa13.79□□□□□ -0.2
CPNE1-214ENST00000435747 INHBEP58166 350 aa13.79□□□□□ -0.2
CPNE1-214ENST00000435747 ZNF280AP59817 542 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-214ENST00000435747 PTPN12Q05209 780 aaKnown RBP13.79□□□□□ -0.2
CPNE1-214ENST00000435747 CNGB1Q14028 1251 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-214ENST00000435747 SPRYD7Q5W111 196 aa13.79□□□□□ -0.2
CPNE1-214ENST00000435747 ARMC9Q7Z3E5 817 aa13.79□□□□□ -0.2
CPNE1-214ENST00000435747 EYA3Q99504 573 aa13.79□□□□□ -0.2
CPNE1-214ENST00000435747 PRO3102Q9H379 93 aa13.79□□□□□ -0.2
CPNE1-214ENST00000435747 NSFL1CQ9UNZ2 370 aaKnown RBP13.79□□□□□ -0.2
CPNE1-214ENST00000435747 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
CPNE1-214ENST00000435747 GIGYF2Q6Y7W6 1299 aaKnown RBP13.78□□□□□ -0.2
CPNE1-214ENST00000435747 RRP7AQ9Y3A4 280 aaKnown RBP13.78□□□□□ -0.2
CPNE1-214ENST00000435747 VCANP13611 3396 aa13.77□□□□□ -0.2
CPNE1-214ENST00000435747 A0A1W2PPC1 479 aa13.77□□□□□ -0.21
CPNE1-214ENST00000435747 SOX1O00570 391 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-214ENST00000435747 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-214ENST00000435747 MYL6BP14649 208 aa13.77□□□□□ -0.21
CPNE1-214ENST00000435747 SP3Q02447 781 aa13.77□□□□□ -0.21
CPNE1-214ENST00000435747 AGBL3Q8NEM8 1001 aa13.77□□□□□ -0.21
CPNE1-214ENST00000435747 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
CPNE1-214ENST00000435747 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
CPNE1-214ENST00000435747 G3V3G9 751 aa13.76□□□□□ -0.21
CPNE1-214ENST00000435747 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-214ENST00000435747 PRKAR2BP31323 418 aa13.76□□□□□ -0.21
CPNE1-214ENST00000435747 PRKG1Q13976 671 aa13.76□□□□□ -0.21
CPNE1-214ENST00000435747 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
CPNE1-214ENST00000435747 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
CPNE1-214ENST00000435747 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
CPNE1-214ENST00000435747 POLLQ9UGP5 575 aa13.76□□□□□ -0.21
CPNE1-214ENST00000435747 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-214ENST00000435747 IGF2BP3O00425 579 aaKnown RBP eCLIP13.75□□□□□ -0.21
CPNE1-214ENST00000435747 CRHR2Q13324 411 aa13.75□□□□□ -0.21
CPNE1-214ENST00000435747 ARHGEF6Q15052 776 aa13.75□□□□□ -0.21
CPNE1-214ENST00000435747 OTUD7BQ6GQQ9 843 aa13.75□□□□□ -0.21
CPNE1-214ENST00000435747 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-214ENST00000435747 ANKRD13DQ6ZTN6 518 aa13.75□□□□□ -0.21
CPNE1-214ENST00000435747 CFAP53Q96M91 514 aa13.75□□□□□ -0.21
CPNE1-214ENST00000435747 PTCH2Q9Y6C5 1203 aa13.75□□□□□ -0.21
CPNE1-214ENST00000435747 PSME4Q14997 1843 aa13.75□□□□□ -0.21
CPNE1-214ENST00000435747 TTC28Q96AY4 2481 aa13.74□□□□□ -0.21
CPNE1-214ENST00000435747 USP17L8P0C7I0 530 aa13.74□□□□□ -0.21
CPNE1-214ENST00000435747 GPSM2P81274 684 aa13.74□□□□□ -0.21
CPNE1-214ENST00000435747 MCM10Q7L590 875 aa13.74□□□□□ -0.21
CPNE1-214ENST00000435747 HTATIP2Q9BUP3 242 aa13.74□□□□□ -0.21
CPNE1-214ENST00000435747 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-214ENST00000435747 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
CPNE1-214ENST00000435747 LAMB1P07942 1786 aa13.73□□□□□ -0.21
CPNE1-214ENST00000435747 CAP1Q01518 475 aa13.73□□□□□ -0.21
CPNE1-214ENST00000435747 LDLRAD1Q5T700 205 aa13.73□□□□□ -0.21
CPNE1-214ENST00000435747 SLC10A4Q96EP9 437 aa13.73□□□□□ -0.21
CPNE1-214ENST00000435747 ZC3H12CQ9C0D7 883 aaKnown RBP13.73□□□□□ -0.21
CPNE1-214ENST00000435747 ANGEL1Q9UNK9 670 aaKnown RBP13.73□□□□□ -0.21
CPNE1-214ENST00000435747 STXBP5LQ9Y2K9 1186 aa13.73□□□□□ -0.21
CPNE1-214ENST00000435747 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
CPNE1-214ENST00000435747 ZBTB48P10074 688 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-214ENST00000435747 NBPF9Q3BBW0 867 aa13.72□□□□□ -0.21
CPNE1-214ENST00000435747 NUDCQ9Y266 331 aa13.72□□□□□ -0.21
CPNE1-214ENST00000435747 ZBTB7BO15156 539 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-214ENST00000435747 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-214ENST00000435747 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■□□□□ 8.5
CPNE1-214ENST00000435747 DEFB123Q8N688 67 aa13.71□□□□□ -0.21
CPNE1-214ENST00000435747 TBC1D16Q8TBP0 767 aa13.71□□□□□ -0.21
CPNE1-214ENST00000435747 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.21
CPNE1-214ENST00000435747 WNK4Q96J92 1243 aa13.71□□□□□ -0.21
CPNE1-214ENST00000435747 SH3TC1Q8TE82 1336 aa13.7□□□□□ -0.22
CPNE1-214ENST00000435747 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
CPNE1-214ENST00000435747 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
CPNE1-214ENST00000435747 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
CPNE1-214ENST00000435747 CELF1Q92879 486 aaKnown RBP13.7□□□□□ -0.22
CPNE1-214ENST00000435747 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
CPNE1-214ENST00000435747 GMLQ99445 158 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms