RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 VPS53Q5VIR6 699 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 USP48Q86UV5 1035 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 ZSCAN23Q3MJ62 389 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 ZBTB38Q8NAP3 1195 aaPredicted RBP14.41□□□□□ -0.1
CLDN4-203ENST00000435050 CHMP4CQ96CF2 233 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 INTS4Q96HW7 963 aaKnown RBP14.41□□□□□ -0.1
CLDN4-203ENST00000435050 DNM1Q05193 864 aaKnown RBP14.4□□□□□ -0.1
CLDN4-203ENST00000435050 ME3Q16798 604 aa14.4□□□□□ -0.1
CLDN4-203ENST00000435050 TTLL5Q6EMB2 1281 aa14.4□□□□□ -0.1
CLDN4-203ENST00000435050 OVOS2A0A0G2JMS6 1433 aa14.4□□□□□ -0.1
CLDN4-203ENST00000435050 RNF113AO15541 343 aaKnown RBP14.4□□□□□ -0.1
CLDN4-203ENST00000435050 UTP14AQ9BVJ6 771 aaKnown RBP14.4□□□□□ -0.1
CLDN4-203ENST00000435050 CCDC87Q9NVE4 849 aa14.4□□□□□ -0.1
CLDN4-203ENST00000435050 HAUS7Q99871 368 aa14.4□□□□□ -0.1
CLDN4-203ENST00000435050 RAI14Q9P0K7 980 aa14.4□□□□□ -0.1
CLDN4-203ENST00000435050 HMG20BQ9P0W2 317 aa14.4□□□□□ -0.1
CLDN4-203ENST00000435050 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
CLDN4-203ENST00000435050 PCCAP05165 728 aaPredicted RBP14.39□□□□□ -0.11
CLDN4-203ENST00000435050 APOBRQ0VD83 1088 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 NLRP10Q86W26 655 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 MAP4K1Q92918 833 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 LMBRD1Q9NUN5 540 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 SLIT3O75094 1523 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 SIK1P57059 783 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 KCNQ2O43526 872 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 KRT85P78386 507 aa14.39□□□□□ -0.11
CLDN4-203ENST00000435050 SLC5A1P13866 664 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 CRKLP46109 303 aaKnown RBP14.38□□□□□ -0.11
CLDN4-203ENST00000435050 CHAF1AQ13111 956 aaPredicted RBP14.38□□□□□ -0.11
CLDN4-203ENST00000435050 GAS2L3Q86XJ1 694 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 CTNNA3Q9UI47 895 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 ZNF213O14771 459 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 CTSWP56202 376 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 CCDC144CPQ8IYA2 1237 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 TAF6LQ9Y6J9 622 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 GADD45BO75293 160 aaPredicted RBP14.38□□□□□ -0.11
CLDN4-203ENST00000435050 RFX5P48382 616 aaPredicted RBP14.38□□□□□ -0.11
CLDN4-203ENST00000435050 CAMK4Q16566 473 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 CAMTA1Q9Y6Y1 1673 aa14.38□□□□□ -0.11
CLDN4-203ENST00000435050 PDE8AO60658 829 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 ZPR1O75312 459 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 BRD1O95696 1058 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
CLDN4-203ENST00000435050 F13A1P00488 732 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 TDO2P48775 406 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 UTYO14607 1347 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 NCOA3Q9Y6Q9 1424 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 RABL6Q3YEC7 729 aaPredicted RBP14.37□□□□□ -0.11
CLDN4-203ENST00000435050 ZSCAN25Q6NSZ9 544 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
CLDN4-203ENST00000435050 SEC31BQ9NQW1 1179 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 COL5A2P05997 1499 aaPredicted RBP14.37□□□□□ -0.11
CLDN4-203ENST00000435050 JAK2O60674 1132 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 NECTIN1Q15223 517 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 DRC7Q8IY82 874 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 SPATA32Q96LK8 384 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 TSPY26PQ9H489 355 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 ZSWIM6Q9HCJ5 1215 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 MTMR7Q9Y216 660 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 JAG2Q9Y219 1238 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 ZDHHC9Q9Y397 364 aa14.37□□□□□ -0.11
CLDN4-203ENST00000435050 CYP19A1P11511 503 aaPredicted RBP14.36□□□□□ -0.11
CLDN4-203ENST00000435050 CCDC152Q4G0S7 254 aa14.36□□□□□ -0.11
CLDN4-203ENST00000435050 ATG9AQ7Z3C6 839 aa14.36□□□□□ -0.11
CLDN4-203ENST00000435050 MINDY4BA8MYZ0 360 aa14.36□□□□□ -0.11
CLDN4-203ENST00000435050 CYP21A2P08686 494 aa14.36□□□□□ -0.11
CLDN4-203ENST00000435050 SLC4A8Q2Y0W8 1093 aa14.36□□□□□ -0.11
CLDN4-203ENST00000435050 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
CLDN4-203ENST00000435050 CUL4AQ13619 759 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 ISCA1Q9BUE6 129 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 NAPBQ9H115 298 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 NKX1-1Q15270 411 aaPredicted RBP14.35□□□□□ -0.11
CLDN4-203ENST00000435050 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
CLDN4-203ENST00000435050 RXRAP19793 462 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 ATP2B1P20020 1258 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 MAP3K12Q12852 859 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 TTLL11Q8NHH1 800 aa14.35□□□□□ -0.11
CLDN4-203ENST00000435050 GOLGA8BA8MQT2 603 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
CLDN4-203ENST00000435050 GNPATO15228 680 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 PHKA1P46020 1223 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 ZNF142P52746 1687 aaPredicted RBP14.34□□□□□ -0.11
CLDN4-203ENST00000435050 KIF1AQ12756 1690 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 NBPF5PQ86XG9 351 aaPredicted RBP14.34□□□□□ -0.11
CLDN4-203ENST00000435050 GPT2Q8TD30 523 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 TMEM63CQ9P1W3 806 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 GPAA1O43292 621 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
CLDN4-203ENST00000435050 SCARF1Q14162 830 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 SUSD4Q5VX71 490 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
CLDN4-203ENST00000435050 MAGEB6Q8N7X4 407 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms