RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 FAM35AQ86V20 835 aa6.3□□□□□ -1.4
LINC01239-201ENST00000433645 HOMEZQ8IX15 550 aa6.3□□□□□ -1.4
LINC01239-201ENST00000433645 ZNF417Q8TAU3 575 aa6.3□□□□□ -1.4
LINC01239-201ENST00000433645 ALKBH8Q96BT7 664 aaKnown RBP6.3□□□□□ -1.4
LINC01239-201ENST00000433645 DMRTB1Q96MA1 342 aa6.3□□□□□ -1.4
LINC01239-201ENST00000433645 ZNF587Q96SQ5 575 aaPredicted RBP6.3□□□□□ -1.4
LINC01239-201ENST00000433645 IGFLR1Q9H665 355 aa6.3□□□□□ -1.4
LINC01239-201ENST00000433645 DCTN4Q9UJW0 460 aa6.3□□□□□ -1.4
LINC01239-201ENST00000433645 NAGPAQ9UK23 515 aa6.3□□□□□ -1.4
LINC01239-201ENST00000433645 CNTNAP5Q8WYK1 1306 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 RGS9O75916 674 aaPredicted RBP6.29□□□□□ -1.4
LINC01239-201ENST00000433645 GHRHP01286 108 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 TBC1D8BQ0IIM8 1120 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
LINC01239-201ENST00000433645 PSAPL1Q6NUJ1 521 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 ILDR2Q71H61 639 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 SPACA7Q96KW9 195 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 LPIN3Q9BQK8 851 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 SALL4Q9UJQ4 1053 aa6.29□□□□□ -1.4
LINC01239-201ENST00000433645 IGHA2P01877 340 aa6.28□□□□□ -1.4
LINC01239-201ENST00000433645 NID1P14543 1247 aa6.28□□□□□ -1.4
LINC01239-201ENST00000433645 CES1P23141 567 aa6.28□□□□□ -1.4
LINC01239-201ENST00000433645 PERM1Q5SV97 790 aa6.28□□□□□ -1.4
LINC01239-201ENST00000433645 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
LINC01239-201ENST00000433645 CNTN3Q9P232 1028 aa6.28□□□□□ -1.4
LINC01239-201ENST00000433645 BIN2Q9UBW5 565 aaPredicted RBP6.28□□□□□ -1.4
LINC01239-201ENST00000433645 CPB1P15086 417 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 AFF1P51825 1210 aaKnown RBP6.27□□□□□ -1.41
LINC01239-201ENST00000433645 GRIK5Q16478 980 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 AEBP1Q8IUX7 1158 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 CEP120Q8N960 986 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 C1orf127Q8N9H9 656 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 NSUN5Q96P11 429 aaKnown RBP6.27□□□□□ -1.41
LINC01239-201ENST00000433645 DNAJC25Q9H1X3 360 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 CHRDQ9H2X0 955 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 ZFYVE28Q9HCC9 887 aa6.27□□□□□ -1.41
LINC01239-201ENST00000433645 JPH1Q9HDC5 661 aaPredicted RBP6.27□□□□□ -1.41
LINC01239-201ENST00000433645 A6NHS1 94 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 PHACTR2O75167 634 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 EDN3P14138 238 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 EIF2AK2P19525 551 aaKnown RBP6.26□□□□□ -1.41
LINC01239-201ENST00000433645 GSK3AP49840 483 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 SND1Q7KZF4 910 aaKnown RBP eCLIP6.26□□□□□ -1.41
LINC01239-201ENST00000433645 DTWD1Q8N5C7 304 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 PLD4Q96BZ4 506 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 TRIM11Q96F44 468 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 AMOTL2Q9Y2J4 779 aa6.26□□□□□ -1.41
LINC01239-201ENST00000433645 J3QW42 95 aa6.25□□□□□ -1.41
LINC01239-201ENST00000433645 CYP2E1P05181 493 aaPredicted RBP6.25□□□□□ -1.41
LINC01239-201ENST00000433645 IRS1P35568 1242 aa6.25□□□□□ -1.41
LINC01239-201ENST00000433645 RASSF7Q02833 373 aa6.25□□□□□ -1.41
LINC01239-201ENST00000433645 MLLT1Q03111 559 aaPredicted RBP6.25□□□□□ -1.41
LINC01239-201ENST00000433645 COL13A1Q5TAT6 717 aaPredicted RBP6.25□□□□□ -1.41
LINC01239-201ENST00000433645 MSL1Q68DK7 614 aa6.25□□□□□ -1.41
LINC01239-201ENST00000433645 NCAPG2Q86XI2 1143 aa6.25□□□□□ -1.41
LINC01239-201ENST00000433645 ZSCAN29Q8IWY8 852 aaPredicted RBP6.25□□□□□ -1.41
LINC01239-201ENST00000433645 SMG9Q9H0W8 520 aaKnown RBP6.25□□□□□ -1.41
LINC01239-201ENST00000433645 MUC3BQ9H195 1237 aa6.25□□□□□ -1.41
LINC01239-201ENST00000433645 SRA1Q9HD15 236 aaKnown RBP6.25□□□□□ -1.41
LINC01239-201ENST00000433645 GPR182O15218 404 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 SMNDC1O75940 238 aaKnown RBP eCLIP6.24□□□□□ -1.41
LINC01239-201ENST00000433645 HFE2Q6ZVN8 426 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 TMC7Q7Z402 723 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 DCAF11Q8TEB1 546 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 NUDT8Q8WV74 236 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 ASB16Q96NS5 453 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 PLVAPQ9BX97 442 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 PBX4Q9BYU1 374 aa6.24□□□□□ -1.41
LINC01239-201ENST00000433645 EREGO14944 169 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 TREHO43280 583 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 CPNE3O75131 537 aaKnown RBP6.23□□□□□ -1.41
LINC01239-201ENST00000433645 SPATA31C1P0DKV0 1188 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 MAPK1P28482 360 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 DSC3Q14574 896 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 PRRT3Q5FWE3 981 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 MAP4K3Q8IVH8 894 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 GALNT12Q8IXK2 581 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 TMEM151AQ8N4L1 468 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 TMC1Q8TDI8 760 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 DZANK1Q9NVP4 752 aa6.23□□□□□ -1.41
LINC01239-201ENST00000433645 FOXD3Q9UJU5 478 aaPredicted RBP6.23□□□□□ -1.41
LINC01239-201ENST00000433645 NFKBIEO00221 500 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 COL8A1P27658 744 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 COL19A1Q14993 1142 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 C8orf86Q6ZUL3 223 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 WFDC8Q8IUA0 241 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 TMEM102Q8N9M5 508 aaPredicted RBP6.22□□□□□ -1.41
LINC01239-201ENST00000433645 ADAM19Q9H013 955 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 SUV39H2Q9H5I1 410 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 KANSL3Q9P2N6 904 aa6.22□□□□□ -1.41
LINC01239-201ENST00000433645 GDF11O95390 407 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 PTPRAP18433 802 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 BAG6P46379 1132 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 RAC1P63000 192 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 PLCB3Q01970 1234 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 TRIM28Q13263 835 aaKnown RBP6.21□□□□□ -1.42
LINC01239-201ENST00000433645 CEP135Q66GS9 1140 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 DCAF5Q96JK2 942 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 CSRNP1Q96S65 589 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 BHLHE41Q9C0J9 482 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms