RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 CCDC152Q4G0S7 254 aa18.26■□□□□ 0.51
SF1-209ENST00000433274 RTCBQ9Y3I0 505 aaKnown RBP18.26■□□□□ 0.51
SF1-209ENST00000433274 MED23Q9ULK4 1368 aa18.26■□□□□ 0.51
SF1-209ENST00000433274 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
SF1-209ENST00000433274 TBC1D9BQ66K14 1250 aa18.25■□□□□ 0.51
SF1-209ENST00000433274 VGLL2Q8N8G2 317 aa18.25■□□□□ 0.51
SF1-209ENST00000433274 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
SF1-209ENST00000433274 NARFQ9UHQ1 456 aa18.25■□□□□ 0.51
SF1-209ENST00000433274 RBM8AQ9Y5S9 174 aaKnown RBP18.25■□□□□ 0.51
SF1-209ENST00000433274 RFX7Q2KHR2 1363 aa18.25■□□□□ 0.51
SF1-209ENST00000433274 SBF2Q86WG5 1849 aa18.25■□□□□ 0.51
SF1-209ENST00000433274 ERFEQ4G0M1 354 aa18.24■□□□□ 0.51
SF1-209ENST00000433274 NOL8Q76FK4 1167 aaKnown RBP18.24■□□□□ 0.51
SF1-209ENST00000433274 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
SF1-209ENST00000433274 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
SF1-209ENST00000433274 BCL11BQ9C0K0 894 aaPredicted RBP18.24■□□□□ 0.51
SF1-209ENST00000433274 ZPR1O75312 459 aa18.24■□□□□ 0.51
SF1-209ENST00000433274 PDE8BO95263 885 aa18.24■□□□□ 0.51
SF1-209ENST00000433274 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
SF1-209ENST00000433274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.24■□□□□ 0.51
SF1-209ENST00000433274 DDX60Q8IY21 1712 aaKnown RBP18.24■□□□□ 0.51
SF1-209ENST00000433274 NECTIN1Q15223 517 aa18.23■□□□□ 0.51
SF1-209ENST00000433274 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
SF1-209ENST00000433274 MPHOSPH8Q99549 860 aa18.23■□□□□ 0.51
SF1-209ENST00000433274 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
SF1-209ENST00000433274 MCM2P49736 904 aa18.23■□□□□ 0.51
SF1-209ENST00000433274 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
SF1-209ENST00000433274 SCARF1Q14162 830 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 SLFNL1Q499Z3 407 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 MROH5Q6ZUA9 1318 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 LY75O60449 1722 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 LRP5O75197 1615 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 PHF14O94880 888 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 GTF2E1P29083 439 aaPredicted RBP18.22■□□□□ 0.51
SF1-209ENST00000433274 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 CREB3L3Q68CJ9 461 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
SF1-209ENST00000433274 SCN7AQ01118 1682 aa18.22■□□□□ 0.51
SF1-209ENST00000433274 TAF5LO75529 589 aa18.21■□□□□ 0.51
SF1-209ENST00000433274 KRT27Q7Z3Y8 459 aa18.21■□□□□ 0.51
SF1-209ENST00000433274 EP400Q96L91 3159 aa18.21■□□□□ 0.51
SF1-209ENST00000433274 RGL2O15211 777 aa18.21■□□□□ 0.51
SF1-209ENST00000433274 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
SF1-209ENST00000433274 CASTP20810 708 aaKnown RBP18.21■□□□□ 0.51
SF1-209ENST00000433274 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
SF1-209ENST00000433274 PI16Q6UXB8 463 aa18.21■□□□□ 0.51
SF1-209ENST00000433274 SETDB2Q96T68 719 aa18.21■□□□□ 0.51
SF1-209ENST00000433274 LRRC4BQ9NT99 713 aa18.21■□□□□ 0.51
SF1-209ENST00000433274 ZAP70P43403 619 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 PUM3Q15397 648 aaKnown RBP18.2■□□□□ 0.5
SF1-209ENST00000433274 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 FAM196AQ6ZSG2 479 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 C3orf67Q6ZVT6 689 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 ZGPATQ8N5A5 531 aaKnown RBP18.2■□□□□ 0.5
SF1-209ENST00000433274 KCNB2Q92953 911 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
SF1-209ENST00000433274 RTL9Q8NET4 1388 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 SLC27A2O14975 620 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 CPA1P15085 419 aa18.2■□□□□ 0.5
SF1-209ENST00000433274 LAMB2P55268 1798 aa18.19■□□□□ 0.5
SF1-209ENST00000433274 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
SF1-209ENST00000433274 ABCC12Q96J65 1359 aa18.19■□□□□ 0.5
SF1-209ENST00000433274 SNAP23O00161 211 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 RNF113AO15541 343 aaKnown RBP18.18■□□□□ 0.5
SF1-209ENST00000433274 RFC4P35249 363 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 MCAMP43121 646 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 TRAPPC3LQ5T215 181 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 LPIN2Q92539 896 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 C4BP0C0L5 1744 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 TRIM37O94972 964 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 FGFR2P21802 821 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 RAB3GAP1Q15042 981 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 ZMYM1Q5SVZ6 1142 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 RNF20Q5VTR2 975 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 NBPF5PQ86XG9 351 aaPredicted RBP18.18■□□□□ 0.5
SF1-209ENST00000433274 TTC14Q96N46 770 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 NYXQ9GZU5 481 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 SPEF2Q9C093 1822 aa18.18■□□□□ 0.5
SF1-209ENST00000433274 PHKA1P46020 1223 aa18.17■□□□□ 0.5
SF1-209ENST00000433274 CCDC102BQ68D86 513 aa18.17■□□□□ 0.5
SF1-209ENST00000433274 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
SF1-209ENST00000433274 CDC5LQ99459 802 aaKnown RBP18.17■□□□□ 0.5
SF1-209ENST00000433274 SLC5A1P13866 664 aa18.17■□□□□ 0.5
SF1-209ENST00000433274 SF3B3Q15393 1217 aaKnown RBP18.17■□□□□ 0.5
SF1-209ENST00000433274 TNPO1Q92973 898 aaKnown RBP18.17■□□□□ 0.5
SF1-209ENST00000433274 SSFA2P28290 1259 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 AK2P54819 239 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 CCDC24Q8N4L8 307 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 IL27Q8NEV9 243 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 TM6SF1Q9BZW5 370 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 CWC22Q9HCG8 908 aaKnown RBP18.16■□□□□ 0.5
SF1-209ENST00000433274 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
SF1-209ENST00000433274 LARP6Q9BRS8 491 aaKnown RBP18.16■□□□□ 0.5
SF1-209ENST00000433274 ZSWIM6Q9HCJ5 1215 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 CYP46A1Q9Y6A2 500 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
SF1-209ENST00000433274 CHRNDQ07001 517 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms